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Filtering by: Creator Murphy, Kevin Remove constraint Creator: Murphy, Kevin Academic Affiliation Microbiology Remove constraint Academic Affiliation: Microbiology

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Chemical and Genetic Investigations of Toxic Freshwater Cyanobacterial Blooms for Improved Monitoring and Understanding of Lake Ecology

Creator:

Collart, Lindsay P.

Abstract:

Toxin production by cyanobacterial harmful algal blooms (cyanoHABs) in freshwater systems has lasting ecological and human impacts. Nutrients, light availability, hydrology, and microbial community composition impact the frequency and intensity of toxic cyanoHABs. Climate change will exacerbate toxic cyanoHABs, making real time and predictive monitoring a vital tool for managing...

Resource Type:

Dissertation
Advances in Freshwater Cyanobacterial Genomics

Creator:

Brown, Nathaniel M.

Abstract:

Limnology is undergoing a transition to high-throughput -omic analysis of freshwater bacterial communities. An important first step in making the transition is to characterize several genomes that can be used as references to guide metagenome assembly and analysis. Here I characterize four new freshwater cyanobacterial genomes, a pair of lake...

Resource Type:

Dissertation
Harnessing Heterogeneity in Human Gut Microbiome Data

Creator:

Tataru, Christine

Abstract:

The focus of this thesis is to design, characterize, and apply novel computational methods and molecular systems to interrogate heterogeneous human gut microbiome-related phenomena. In Chapter 2, I design, implement, and characterize a method for embedding co-occurrence patterns derived from massive 16s amplicon datasets. I use this method to 1....

Resource Type:

Dissertation
Impacts of multispecies parasitism on coho salmon (Oncorhynchus kisutch) in Oregon

Creator:

Ferguson, Jayde A.

Abstract:

Diseases caused by parasites are recognized as significant sources of mortality in wild fish populations. I assessed the impacts of multispecies parasitism on a threatened stock of juvenile coho salmon (Oncorhynchus kisutch). A crucial prerequisite to this research was proper identification of parasites, which can be difficult for species lacking...

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Dissertation

Full Text:

David Jepsen, Erik Suring, Bruce Miller, Ron Constable, Chris Lorion, and the late Kevin Leader for

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Academic Affiliation

Microbiology[remove]4

Advisor

David, Maude M.1
Dreher, Theo W.1
Halsey, Kimberly H.1
Kent, Michael1

Commencement Year

Commencement Year range begin – Commencement Year range end

Current results range from 2011 to 2023

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Committee Member

Chang, Jeff1
Crump, Byron C.1
Danelishvili, Lia1
Fern, XiaoLi1
Franco, Maria1
more Committee Members »

Creator

Brown, Nathaniel M.1
Collart, Lindsay P.1
Ferguson, Jayde A.1
Tataru, Christine1

Contributor

Chrisman, Brianna1
David, Maude1
Deitlzer, Grace1
Desantis, Todd1
Eaton, Austin1
more Contributors »

Date

Date range begin – Date range end

Current results range from 2010 to 2023

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Decade

2020-20292
2010-20192

Degree Field

Microbiology4

Degree Level

Doctoral4

Degree Name

Doctor of Philosophy (Ph.D.)4

Language

English [eng]4

License

All rights reserved4

Non-Academic Affiliation

Oregon State University. Graduate School2

Peer Reviewed

No3

Resource Type

Dissertation4

Rights Statement

In Copyright4

Subject

Algal blooms -- Washington (State) -- Anderson Lake1
Anabaena -- Genome mapping1
Aphanizomenon -- Genetics1
Bacteriophages -- Genome mapping1
Coho salmon -- Mortality -- Oregon1
more Subjects »

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