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Filtering by: Creator Chinnayakanahalli, Kiran J. Advisor David, Maude M.

Mining Public Microbiome Datasets to Identify Specific Microbial Taxa Associated with Anxiety-Related Disorders

Creator:

Martin, Austin N.

Abstract:

Over the last ten years, clinical, pre-clinical and animal studies have shown associations between the microbiota and neurological functions. Recent work by the scientific community on the gut-microbiome-brain axis have revealed that gut dysbiosis and specific microbial taxa are associated with a myriad of neurological conditions, such as autism spectrum...

Resource Type:

Honors College Thesis

Full Text:

sequence data that use quality data to correct for sequencing errors are DADA2 and deblur (Benjamin J
Harnessing Heterogeneity in Human Gut Microbiome Data

Creator:

Tataru, Christine

Abstract:

The focus of this thesis is to design, characterize, and apply novel computational methods and molecular systems to interrogate heterogeneous human gut microbiome-related phenomena. In Chapter 2, I design, implement, and characterize a method for embedding co-occurrence patterns derived from massive 16s amplicon datasets. I use this method to 1....

Resource Type:

Dissertation