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Filtering by: Creator Paradis, G. Remove constraint Creator: Paradis, G. Advisor Grunwald, Niklaus J. Remove constraint Advisor: Grunwald, Niklaus J.

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Development and Application of Tools for Genetic Analysis of Clonal Populations

Creator:

Kamvar, Zhian N.

Abstract:

Research on the population genetics of microbial organisms requires the use of specialized analyses designed for clonal organisms to avoid violating the assumptions of traditional population genetic models. The tools necessary for performing these analyses existed as a set of unrelated software with non-overlapping capabilities and did not cover all...

Resource Type:

Dissertation
Integration of Evolutionary Theory and Genomics to Understand Processes Involved in Host Adaptation and Divergence in Phytophthora Plant Pathogens

Creator:

Tabima, Javier F.

Abstract:

Modern plant pathology benefits from integrating methods and concepts from evolutionary biology. For example, evolutionary concepts are used to identify and examine species boundaries of plant pathogens, recognize processes underlying pathogen biogeography, identify traits that characterize emerging species, and discover new molecular interactions that originate under processes of selection. In...

Resource Type:

Dissertation
Phylogeography and Evolution of Effector Genes in Phytophthora Species

Creator:

Shakya, Shankar K.

Abstract:

Plant pathogens in the genus Phytophthora are known to cause disease on field crops, nursery plants, and forest trees. The best known example probably is Phytophthora infestans, which triggered the infamous Irish potato famine. Other important Phytophthora species include: P. ramorum (sudden oak death pathogen), P. sojae (soybean root rot...

Resource Type:

Dissertation

Full Text:

(eMLG), Stoddart and Taylor’s diversity (G), and expected heterozygosity (Hexp
Development of Computational, Visualization, and Molecular Tools for Fungal and Oomycete Community Ecology

Creator:

Foster, Zachary Stephen Longiaru

Abstract:

Oomycetes are an important group of organisms with a variety of ecological roles similar to fungi. Although many are well-studied plant pathogens known for their devastating effects on agricultural systems, most are little-studied saprobes and parasites of plants and animals in nearly every ecosystem on earth. The advent of affordable...

Resource Type:

Dissertation

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Academic Affiliation

Botany and Plant Pathology4

Advisor

Grunwald, Niklaus J.[remove]4

Commencement Year

Commencement Year range begin – Commencement Year range end

Current results range from 2017 to 2021

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Committee Member

Spatafora, Joseph W.2
Wolpert, Thomas2
Blouin, Michael S.1
Chang, Jeff H.1
Langellotto, Gail A.1
more Committee Members »

Creator

Foster, Zachary Stephen Longiaru1
Kamvar, Zhian N.1
Shakya, Shankar K.1
Tabima, Javier F.1

Contributor

Albornoz, Felipe E.1
Chamberlain, Scott1
Fieland, Valerie J.1
Grunwald, Niklaus J.1
Jones, Andrew F.1
more Contributors »

Date

Date range begin – Date range end

Current results range from 2016 to 2020

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Decade

2020-20291
2010-20193

Degree Field

Botany and Plant Pathology3
Molecular and Cellular Biology1

Degree Level

Doctoral4

Degree Name

Doctor of Philosophy (Ph.D.)4

Language

English [eng]4

License

All rights reserved3
Attribution 4.0 (CC BY 4.0)1

Non-Academic Affiliation

Oregon State University. Graduate School1

Peer Reviewed

No3

Resource Type

Dissertation4

Rights Statement

In Copyright4

Subject

Clones (Plants) -- Genetics -- Computer programs1
Phytopathogenic microorganisms -- Genetics -- Computer programs1
Phytophthora ramorum -- Oregon -- Curry County1
Plant diseases -- Epidemiology -- Computer programs1
Plant population genetics -- Computer programs1
more Subjects »

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