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Filtering by: Creator Place, Benjamin J. Remove constraint Creator: Place, Benjamin J. Committee Member Fern, Alan Remove constraint Committee Member: Fern, Alan Committee Member Tadepalli, Prasad Remove constraint Committee Member: Tadepalli, Prasad License All rights reserved Remove constraint License: All rights reserved

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  • Protein secondary structure prediction using conditional random fields and profiles

    Creator:
    Shen, Rongkun
    Abstract:
    Protein secondary structure prediction plays a pivotal role in predicting protein folding in three-dimensions. Its task is to assign each residue one of the three secondary structure classes helix, strand, or random coil. This is an instance of the problem of sequential supervised learning in machine learning. This thesis describes...
    Resource Type:
    Masters Thesis
    Full Text:
    extensive help during this research. Thanks to Thomas G. Dietterich and Adam J. Ashenfelter for the core

  • Weakly Supervised Learning for Activity Recognition from Time Series Data

    Creator:
    Guan, Xinze
    Abstract:
    The thesis focuses on activity recognition from sensor data, which has spurred a great deal of interest due to its impact on health care and security. Previous work on activity recognition from multivariate time series data has mainly applied supervised learning techniques which require a high degree of annotation effort...
    Resource Type:
    Dissertation
    Full Text:
    . Correlation between each pair of axes:∑T i=1(si−µs)(vi−µv)√∑T i=1(si−µs) ∑T j=1(vj−µv) . O(N) Table 2.1

  • Multiagent learning for locomotion and coordination in tensegrity robotics

    Creator:
    Iscen, Atil
    Abstract:
    Tensegrity structures are composed of pure compressional elements that are connected via a network of pure tensional elements. The concept of tensegrity promises numerous advantages to the field of robotics. Tensegrity robots are, however, notoriously difficult to control due to their oscillatory nature and nonlinear interaction between the components. Multiagent...
    Resource Type:
    Dissertation
    Full Text:
    reward function. We take a snapshot of the environment (z), feed the reward function with z and z−j

  • Semantic embodied navigation : developing agents that navigate from language and vision

    Creator:
    Krantz, Jacob
    Abstract:
    Autonomous robotic agents are on their way to becoming in-home personal assistants, construction assistants, and warehouse workers. The degree of autonomy of such systems is reflected by the manner in which we specify goals to them; the abstraction of low-level commands to high-level goals goes hand-in-hand with increased autonomy. In...
    Resource Type:
    Dissertation
    Full Text:
    in place of panoramic images, our continuous-environment benchmark trades decreased perception

  • Machine learning for improving the quality of citizen science data

    Creator:
    Yu, Jun
    Abstract:
    Citizen Science is a paradigm in which volunteers from the general public participate in scientific studies, often by performing data collection. This paradigm is especially useful if the scope of the study is too broad to be performed by a limited number of trained scientists. Although citizen scientists can contribute...
    Resource Type:
    Dissertation
    Full Text:
    species. Note that the link from Ej to Yit only exists if birder j submits the checklist corresponding to

  • Bayesian optimization with empirical constraints

    Creator:
    Azimi, Javad
    Abstract:
    Bayesian Optimization (BO) methods are often used to optimize an unknown function f(•) that is costly to evaluate. They typically work in an iterative manner. In each iteration, given a set of observation points, BO algorithms select k ≥ 1 points to be evaluated. The results of those points are...
    Resource Type:
    Dissertation
    Full Text:
    request constrained experiments, which place constraints on these parameters. For example, we may specify

  • Deep Learning for Human and Biological Languages

    Creator:
    Hong, Junki
    Abstract:
    We explore the application of deep learning to the disparate fields of natural language processing and computational biology. Both the sentences uttered by humans as well as the RNA and protein sequences found within the cells of their bodies can be considered formal languages in computer science, as sets of...
    Resource Type:
    Dissertation
    Full Text:
    ) label scores of the resulting span: ξ = maxX s(j, j+1, X) and σ = maxX s(k, j,X) where X is a

  • The density signature

    Creator:
    Migler-VonDollen, Theresa
    Abstract:
    In real networks, identifying dense regions is of great importance. For example, in a network that represents academic collaboration, authors within the densest component of the graph tend to be the most prolific. Dense subgraphs often identify communities in social networks. And dense subgraphs can be used to discover regulatory...
    Resource Type:
    Dissertation
    Full Text:
    GF C J L I N M D H E A B K GF C J L I N M D H E A B K GF C J L I N M D H E

  • Parsing with Recurrent Neural Networks

    Creator:
    Cross, James Henry, III
    Abstract:
    Machine learning models for natural language processing have traditionally relied on large numbers of discrete features, built up from atomic categories such as word forms and part-of-speech labels, which are considered completely distinct from each other. Recently however, the advent of dense feature representations coupled with deep learning techniques has...
    Resource Type:
    Dissertation
    Full Text:
    -standard dependency parsing system [42]. Stack S is a list of heads, j is the start index of the queue, and

  • Applying machine learning for prediction, recommendation, and integration

    Creator:
    Bao, Xinlong
    Abstract:
    This dissertation explores the idea of applying machine learning technologies to help computer users find information and better organize electronic resources, by presenting the research work conducted in the following three applications: FolderPredictor, Stacking Recommendation Engines, and Integrating Learning and Reasoning. FolderPredictor is an intelligent desktop software tool that helps...
    Resource Type:
    Dissertation
    Full Text:
    thank many people from IBM T. J. Watson Research Center, where I spent the summer of 2008 as an intern