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Filtering by: Creator Phillips, Michael John Remove constraint Creator: Phillips, Michael John Committee Member Fern, Alan Remove constraint Committee Member: Fern, Alan Committee Member Tadepalli, Prasad Remove constraint Committee Member: Tadepalli, Prasad

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  • Protein secondary structure prediction using conditional random fields and profiles

    Creator:
    Shen, Rongkun
    Abstract:
    Protein secondary structure prediction plays a pivotal role in predicting protein folding in three-dimensions. Its task is to assign each residue one of the three secondary structure classes helix, strand, or random coil. This is an instance of the problem of sequential supervised learning in machine learning. This thesis describes...
    Resource Type:
    Masters Thesis

  • Machine learning for improving the quality of citizen science data

    Creator:
    Yu, Jun
    Abstract:
    Citizen Science is a paradigm in which volunteers from the general public participate in scientific studies, often by performing data collection. This paradigm is especially useful if the scope of the study is too broad to be performed by a limited number of trained scientists. Although citizen scientists can contribute...
    Resource Type:
    Dissertation

  • Improving automated email tagging with implicit feedback

    Creator:
    Sorower, Mohammad Shahed
    Abstract:
    Machine learning systems are generally trained offline using ground truth data that has been labeled by experts. However, these batch training methods are not a good fit for many applications, especially in the cases where complete ground truth data is not available for offline training. In addition, batch methods do...
    Resource Type:
    Dissertation
    Full Text:
    thanks to Michael Slater, who is not only the primary devel- oper of the software (TAPE) used in this

  • Deep Learning for Human and Biological Languages

    Creator:
    Hong, Junki
    Abstract:
    We explore the application of deep learning to the disparate fields of natural language processing and computational biology. Both the sentences uttered by humans as well as the RNA and protein sequences found within the cells of their bodies can be considered formal languages in computer science, as sets of...
    Resource Type:
    Dissertation

  • Structured learning with latent variables : theory and algorithms

    Creator:
    Zhao, Kai
    Abstract:
    Most tasks in natural language processing (NLP) try to map structured input (e.g., sentence or word sequence) to some form of structured output (tag sequence, parse tree, semantic graph, translated/paraphrased/compressed sentence), a problem known as “structured prediction”. While various learning algorithms such as the perceptron, maximum entropy, and expectation-maximization have...
    Resource Type:
    Dissertation

  • Parsing with Recurrent Neural Networks

    Creator:
    Cross, James Henry, III
    Abstract:
    Machine learning models for natural language processing have traditionally relied on large numbers of discrete features, built up from atomic categories such as word forms and part-of-speech labels, which are considered completely distinct from each other. Recently however, the advent of dense feature representations coupled with deep learning techniques has...
    Resource Type:
    Dissertation
    Full Text:
    Juneki Hong. I am also in eternal debt to my master’s degree advisers Irina Gladkova and Michael

  • Efficient Incremental Panorama Reconstruction from Multiple Videos

    Creator:
    Feng, Zhongyuan
    Abstract:
    Constructing a panorama from a set of videos is a long-standing problem in computer vision. A panorama represents an enhanced still-image representation of an entire scene captured in a set of videos, where each video shows only a part of the scene. Importantly, a panorama shows only the scene background,...
    Resource Type:
    Capstone Project

  • Activity recognition in desktop environments

    Creator:
    Shen, Jianqiang
    Abstract:
    Knowledge workers are struggling in the information flood. There is a growing interest in intelligent desktop environments that help knowledge workers organize their daily life. Intelligent desktop environments allow the desktop user to define a set of “activities” that characterize the user’s desktop work. These environments then attempt to identify...
    Resource Type:
    Dissertation
    Full Text:
    TaskTracer project. Jed Irvine, Kevin Johnsrude, Simone Stumpf and Michael Slater have made significant

  • Bayesian optimization with empirical constraints

    Creator:
    Azimi, Javad
    Abstract:
    Bayesian Optimization (BO) methods are often used to optimize an unknown function f(•) that is costly to evaluate. They typically work in an iterative manner. In each iteration, given a set of observation points, BO algorithms select k ≥ 1 points to be evaluated. The results of those points are...
    Resource Type:
    Dissertation

  • Representationally Robust and Scalable Learning over Relational Databases

    Creator:
    Picado Leiva, Jose Manuel
    Abstract:
    Learning novel concepts from relational databases is an important problem with applications in several disciplines, such as data management, natural language processing, and bioinformatics. For a learning algorithm to be effective, the input data should be clean and in some desired representation. However, real-world data is usually heterogeneous – the...
    Resource Type:
    Dissertation
    Full Text:
    database may contain the value John Smith, even though they refer to the same entity. The use of different