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Filtering by: Creator Warton, David I. Remove constraint Creator: Warton, David I. Committee Member Ramsey, Stephen Remove constraint Committee Member: Ramsey, Stephen Degree Field Computer Science Remove constraint Degree Field: Computer Science Degree Name Honors Bachelor of Science (H.B.S.) Remove constraint Degree Name: Honors Bachelor of Science (H.B.S.)

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  • Position-Dependent Codon Usage Bias in the Human Transcriptome

    Creator:
    Subramanian, Kaavya
    Abstract:
    All life depends on the reliable translation of RNA to protein according to complex interactions between translation machinery and RNA sequence features. While ribosomal occupancy and codon frequencies vary across coding regions, well-established metrics for computing coding potential of RNA do not capture such positional dependence. Here, we investigate position-dependent...
    Resource Type:
    Honors College Thesis
    Full Text:
    :_____________________________________________________ David Hendrix All life depends on the reliable translation of RNA to protein according

  • Transformers for representing microbiome data: an empirical evaluation

    Creator:
    Varma, Rohan
    Abstract:
    As the link between human microbiomes and health has become more established, the interest in applying statistical approaches to microbiome data to understand the mechanisms behind these links has grown. However, microbiome data is often of unmanageable size, and consequently, producing quality lower dimensional representations of samples is a significant...
    Resource Type:
    Honors College Thesis
    Full Text:
    , Mentor, representing Electrical Engineering and Computer Science Maude David, Committee Member