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Filtering by: Creator Kennelly, Patrick J., (Patrick Joseph) Remove constraint Creator: Kennelly, Patrick J., (Patrick Joseph) Committee Member Tadepalli, Prasad Remove constraint Committee Member: Tadepalli, Prasad

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  • OME : A Framework for Running Spatially Explicit System Dynamics Models

    Creator:
    Wingo, Patrick C.
    Abstract:
    The Open Modeling Environment (OME) is a tool developed to address some known shortcomings in ecological System Dynamics (SD) modeling research. OME provides a common set of methods for interacting directly with spatial information, reducing the need for modelers to create their own methods for doing so. The environment is...
    Resource Type:
    Masters Thesis
    Full Text:
    Dynamics Models AN ABSTRACT OF THE THESIS OF Patrick C. Wingo for the degree of

  • Analytical Methods for Improving Causal Inference

    Creator:
    Sinha, Meghamala
    Abstract:
    Causal inference is an important analytical tool to bridge the gap between prediction and decision-making. However, learning a causal network solely from data is a challenging task. In this work, various techniques have been explored for a better and improved causal network learning from data. Firstly, the problem of learning...
    Resource Type:
    Dissertation
    Full Text:
    distribution of p after intervention is: p(V1, ..., Vn) = ∏ Vi∈Oe pi(Vi | Pa(Vi)) · ∏ Vj∈Ie p′j(Vj | Pa(Vj

  • Learning greedy policies for the easy-first framework

    Creator:
    Xie, Jun
    Abstract:
    Easy-first, a search-based structured prediction approach, has been applied to many NLP tasks including dependency parsing and coreference resolution. This approach employs a learned greedy policy (action scoring function) to make easy decisions first, which constrains the remaining decisions and makes them easier. This thesis studies the problem of learning...
    Resource Type:
    Masters Thesis

  • Deep Learning for Human and Biological Languages

    Creator:
    Hong, Junki
    Abstract:
    We explore the application of deep learning to the disparate fields of natural language processing and computational biology. Both the sentences uttered by humans as well as the RNA and protein sequences found within the cells of their bodies can be considered formal languages in computer science, as sets of...
    Resource Type:
    Dissertation
    Full Text:
    , Patrick Morar, Lillian Padgitt-Cobb, Joseph Valencia, and Nathan Waugh. From the Huang lab, this includes

  • Computational Approaches for RNA Structure Prediction with Dynamic Programming and Deep Neural Networks

    Creator:
    Deng, Dezhong
    Abstract:
    Our goal is to build a system to model the RNA sequences that reveals their structural information by using efficient dynamic programming algorithms and deep learning approaches. We aim to 1) achieve linear-time for RNA secondary structure prediction based on existing minimum free energy models; 2) utilize deep neural networks...
    Resource Type:
    Dissertation
    Full Text:
    Waugh, Patrick Morar, Joseph Valencia, and others, for providing a nice and warm group for me, and

  • Topics in toroidal interconnection networks

    Creator:
    Broeg, Robert Richard
    Resource Type:
    Dissertation
    Full Text:
    Tera Parallel Computer (torus) [94], the J-Machine (mesh) [36, 38], the Goodyear Aerospace MPP (mesh

  • Learning with Limited Labeled Data in Natural Language Processing

    Creator:
    Obeidat, Rasha
    Abstract:
    The advent of deep learning models leads to a substantial improvement in a wide range of NLP tasks, achieving state-of-art performances without any hand-crafted features. However, training deep models requires a massive amount of labeled data. Labeling new data as a new task or domain emerges consumes time and efforts...
    Resource Type:
    Dissertation
    Full Text:
    (0, 1− fy∗j (x i) + fyk(x i)) 13 y∗j = argmaxyj∈Yitfyj (x i) Multi-label Cross Entropy (MLCE

  • The density signature

    Creator:
    Migler-VonDollen, Theresa
    Abstract:
    In real networks, identifying dense regions is of great importance. For example, in a network that represents academic collaboration, authors within the densest component of the graph tend to be the most prolific. Dense subgraphs often identify communities in social networks. And dense subgraphs can be used to discover regulatory...
    Resource Type:
    Dissertation
    Full Text:
    grateful Auntie Theresa. For my brother Joseph, thank you for your support, understanding, and encourage­

  • Scheduling and Online Planning in Stochastic Diffusion Networks

    Creator:
    Xue, Shan
    Abstract:
    Diffusion processes in networks are common models for many domains, including species colonization, information/idea cascade, disease propagation and fire spreading. In diffusion networks, a diffusion event occurs when a behavior spreads from one node to the other following a probabilistic model, where the behavior could be species, an idea, a...
    Resource Type:
    Dissertation

  • Variational Satisfiability Solving

    Creator:
    Young, Jeffrey M.
    Abstract:
    Over the last two decades, satisfiability and satisfiability-modulo theory (SAT/SMT) solvers have grown powerful enough to be general purpose reasoning engines throughout software engineering and computer science. However, most practical use cases of SAT/SMT solvers require not just solving a single SAT/SMT problem, but solving sets of related SAT/SMT problems....
    Resource Type:
    Dissertation
    Full Text:
    And | D〈f, f〉 Choice (a) Syntax of VPL. J·K : f → C → f where C : D → B⊥ JtKC = t J¬fKC = ¬JfKC Jf1