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Filtering by: Creator Long, Deng Remove constraint Creator: Long, Deng Committee Member Tadepalli, Prasad Remove constraint Committee Member: Tadepalli, Prasad

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  • Computational Approaches for RNA Structure Prediction with Dynamic Programming and Deep Neural Networks

    Creator:
    Deng, Dezhong
    Abstract:
    Our goal is to build a system to model the RNA sequences that reveals their structural information by using efficient dynamic programming algorithms and deep learning approaches. We aim to 1) achieve linear-time for RNA secondary structure prediction based on existing minimum free energy models; 2) utilize deep neural networks...
    Resource Type:
    Dissertation
    Full Text:
    AN ABSTRACT OF THE DISSERTATION OF Dezhong Deng for the

  • Image feature detection and matching for biological object recognition

    Creator:
    Deng, Hongli
    Abstract:
    Image feature detection and matching are two critical processes for many computer vision tasks. Currently, intensity-based local interest region detectors and local feature-based matching methods are used widely in computer vision applications. But in some applications, such as biological object recognition tasks, within-class changes in pose, lighting, color, and texture...
    Resource Type:
    Dissertation
    Full Text:
    Deng for the degree of Doctor of Philosophy in Computer Science presented on July 9, 2007. Title

  • Deep Learning for Human and Biological Languages

    Creator:
    Hong, Junki
    Abstract:
    We explore the application of deep learning to the disparate fields of natural language processing and computational biology. Both the sentences uttered by humans as well as the RNA and protein sequences found within the cells of their bodies can be considered formal languages in computer science, as sets of...
    Resource Type:
    Dissertation
    Full Text:
    biological contexts have limited types in long sequences of tokens. A sentence has a possible vocabulary

  • Efficient Incremental Panorama Reconstruction from Multiple Videos

    Creator:
    Feng, Zhongyuan
    Abstract:
    Constructing a panorama from a set of videos is a long-standing problem in computer vision. A panorama represents an enhanced still-image representation of an entire scene captured in a set of videos, where each video shows only a part of the scene. Importantly, a panorama shows only the scene background,...
    Resource Type:
    Capstone Project
    Full Text:
    Constructing a panorama from a set of videos is a long-standing problem in computer vision. A panorama

  • Image features and learning algorithms for biological, generic and social object recognition

    Creator:
    Zhang, Wei
    Abstract:
    Automated recognition of object categories in images is a critical step for many real-world computer vision applications. Interest region detectors and region descriptors have been widely employed to tackle the variability of objects in pose, scale, lighting, texture, color, and so on. Different types of object recognition problems usually require...
    Resource Type:
    Dissertation
    Full Text:
    . Let me also say ‘thank you’ to all the other colleagues and friends: Hongli Deng, Gonzalo Martínez

  • Adaptive Multiagent Traffic Management for Autonomous Robotic Systems

    Creator:
    Rebhuhn, Carrie
    Abstract:
    There is growing commercial interest in the use of unmanned aerial vehicles (UAVs) in urban environments, specifically for package delivery applications. However, the size, complexity and sheer numbers of expected UAVs makes conventional air traffic management that relies on human air traffic controllers infeasible. To enable UAVs to safely and...
    Resource Type:
    Dissertation
    Full Text:
    that is adaptive to traffic conditions and learns long-term effects of management decisions. • Create

  • Mechanical design under changing customer requirements case study : BugID

    Creator:
    Fagan, Chris R.
    Abstract:
    Customer requirements and engineering specifications will influence the direction of the design in any product, so it is crucial to make the requirements as stable as possible so quality designs can be produced on time within a budget. It would be optimal for requirements and specifications to remain constant but...
    Resource Type:
    Masters Thesis
    Full Text:
    environment [16]. Requirement changes are likely to occur in long-lived systems and, by embedding

  • A Distributed Scheme for Accelerating and Scaling PSPNet

    Creator:
    Krishna, Ajay
    Abstract:
    Advances in deep learning based image processing have led to their adoption for a wide range of applications, and in tow with these developments is a dramatic increase in the availability of high quality datasets. With this comes the need to accelerate and scale deep learning applications in order to...
    Resource Type:
    Masters Thesis
    Full Text:
    ever idle for too long waiting on a specific task. As soon as the pre-processing by the CPU is done

  • ThreshKnot: Thresholded ProbKnot for Improved RNA Secondary Structure Prediction

    Creator:
    Zhang, Liang
    Abstract:
    RNA structure prediction is a challenging problem, especially with pseudoknots. Recently, there has been a shift from the classical minimum free energy-based methods (MFE) to partition function-based ones that assemble structures based on base-pairing probabilities. Two typical examples of the latter group are the popular maximum expected accuracy (MEA) method...
    Resource Type:
    Masters Thesis
    Full Text:
    , no. 12, pp. 919–929, 2001. 2. J. T. Y. Kung, D. Colognori, and J. T. Lee., “Long noncoding RNAs

  • Evaluation functions in aerial image segmentation

    Creator:
    Langford, William T.
    Abstract:
    Remote sensing is the most practical way to acquire large amounts of land cover data for monitoring and understanding environmental change, so it is important to be able to map land cover from imagery. Maps defining land cover patches as polygons rather than pixels greatly improve processing efficiency in models...
    Resource Type:
    Dissertation
    Full Text:
    have spatial characteristics of landscapes involving networks of long, thin regions such as forests