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Filtering by: Creator McFadden, Andrew K. Remove constraint Creator: McFadden, Andrew K. Committee Member Wong, Weng-Keen Remove constraint Committee Member: Wong, Weng-Keen

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  • Effects of spatial scale and heterogeneity on avian occupancy dynamics and population trends in forested mountain landscapes

    Creator:
    Frey, Sarah J. K.
    Abstract:
    Population trends and patterns in species distributions are the major currencies used to examine responses by biodiversity to changing environments. Effective conservation recommendations require that models of both distribution dynamics and population trends accurately reflect reality. However, identification of the appropriate temporal and spatial scales of animal response, and then...
    Resource Type:
    Dissertation
    Full Text:
    Sarah J. K. Frey for the degree of Doctor of Philosophy in Forest Science presented on December 9, 2014

  • Modeling protein structure at atomic resolution

    Creator:
    Berkholz, Donald S.
    Abstract:
    This thesis includes three studies involving different aspects of modeling protein structure. The first study illustrates the levels of insight available from atomic-resolution protein structures. The second study derives general trends of protein geometry from atomic-resolution structures and shows their implications for modeling. The third study creates a model of...
    Resource Type:
    Dissertation
    Full Text:
    : P. Andrew Karplus This thesis includes three studies involving different aspects of modeling

  • Bayesian optimization with empirical constraints

    Creator:
    Azimi, Javad
    Abstract:
    Bayesian Optimization (BO) methods are often used to optimize an unknown function f(•) that is costly to evaluate. They typically work in an iterative manner. In each iteration, given a set of observation points, BO algorithms select k ≥ 1 points to be evaluated. The results of those points are...
    Resource Type:
    Dissertation
    Full Text:
    select k ≥ 1 points to be evaluated. The results of those points are then added to the set of

  • Network Analysis and Change-point Detection

    Creator:
    Xu, Jiarui
    Abstract:
    Analysis of observations on sequential events over time is common in real life. Sequential measurements over time describing the behavior of systems are usually called time series data, which have been collected in a wide range of disciplines. Over the years there have been multiple research areas in studying stochastic...
    Resource Type:
    Dissertation
    Full Text:
    number estimation in sparse network data. In most clustering algorithms, the number of communities, K

  • Revisiting output coding for sequential supervised learning

    Creator:
    Hao, Guohua
    Abstract:
    Markov models are commonly used for joint inference of label sequences. Unfortunately, inference scales quadratically in the number of labels, which is problematic for training methods where inference is repeatedly preformed and is the primary computational bottleneck for large label sets. Recent work has used output coding to address this...
    Resource Type:
    Masters Thesis
    Full Text:
    computes the “desirability” of label yt given values for label yt−1 and input features wt(X). There are K

  • A study of methods for fine-grained object classification of arthropod specimens

    Creator:
    Lin, Junyuan
    Abstract:
    Object categorization is one of the fundamental topics in computer vision research. Most current work in object categorization aims to discriminate among generic object classes with gross differences. However, many applications require much finer distinctions. This thesis focuses on the design, evaluation and analysis of learning algorithms for fine- grained...
    Resource Type:
    Masters Thesis
    Full Text:
    images; d is the dimensionality of the feature vectors, T is the depth of the decision trees, and k is

  • Crowdsourcing via Pairwise Co-occurrences: Identifiability and Algorithms

    Creator:
    Ibrahim, Shahana
    Abstract:
    Crowdsourcing is a popular paradigm to address the high demands for labeled data in big data deluge. It aims to produce accurate labels by effectively integrating noisy, non-expert labeling from crowdsourced workers (annotators). The machine learning community has been studying effective crowdsourcing methods for many years, and many models and...
    Resource Type:
    Masters Thesis
    Full Text:
    APPENDIX FIGURES Figure Page A.1 The big triangle represents the probability simplex X when K = 3, the

  • Open Set Learning with Counterfactual Images

    Creator:
    Neal, Lawrence W.
    Abstract:
    In open set recognition, a classifier must label instances of known classes while detecting instances of unknown classes not encountered during training. To detect unknown classes while still generalizing to new instances of existing classes, this thesis introduces a dataset augmentation technique called counterfactual image generation. This approach, based on...
    Resource Type:
    Masters Thesis
    Full Text:
    dataset with varying K. . . . . . . . . . . . . . . . . 25 4.2 Receiver Operating Curve plots for open

  • Efficient training and feature induction in sequential supervised learning

    Creator:
    Hao, Guohua
    Abstract:
    Sequential supervised learning problems arise in many real applications. This dissertation focuses on two important research directions in sequential supervised learning: efficient training and feature induction. In the direction of efficient training, we study the training of conditional random fields (CRFs), which provide a flexible and powerful model for sequential...
    Resource Type:
    Dissertation
    Full Text:
    time complexity of these algo- rithms is O(T · Lk+1), where L is the number of class labels, k is the

  • Identifying Design Discussion Topics in Open Source Software

    Creator:
    Chatterjee, Amreeta
    Abstract:
    When contributing to a software system, developers need to understand the rationale for previous design decisions so that they can adhere to the system’s design. Not doing so can lead to erosion of the overall design quality of the system. However, discussions embedded in a large volume of communication on...
    Resource Type:
    Masters Thesis
    Full Text:
    - larities in the feature space between the existing objects using the k-nearest neighbor algorithm (kNN