Index Catalog // ScholarsArchive@OSU

Creator:: Myburg, Alexander A., Grattapaglia, Dario, Tuskan, Gerald A., Vining, Kelly, Amarasinghe, Vindhya, Ranik, Martin, Naithani, Sushma, Elser, Justin, Liston, Aaron, Spatafora, Joseph W., Dharmawardhana, Palitha, Raja, Rajani, Strauss, Steven H., Jaiswal, Pankaj, and et al.
Abstract:: Eucalypts are the world’s most widely planted hardwood trees. Their outstanding diversity, adaptability and growth have made them a global renewable resource of fibre and energy. We sequenced and assembled >94% of the 640-megabase genome of Eucalyptus grandis. Of 36,376 predicted protein-coding genes, 34% occur in tandem duplications, the largest...
Full Text:: /nature13308 The genome of Eucalyptus grandis Alexander A. Myburg1,2, Dario Grattapaglia3,4, Gerald A

Creator:: Toome, Merje, Ohm, Robin A., Riley, Robert W., Boyd, Alexander, Spatafora, Joseph W., and et al.
Abstract:: Mixia osmundae (Basidiomycota, Pucciniomycotina) represents a monotypic class containing an unusual fern pathogen with incompletely understood biology. We sequenced and analyzed the genome of M. osmundae, focusing on genes that may provide some insight into its mode of pathogenicity and reproductive biology. Mixia osmundae has the smallest plant pathogenic basidiomycete...
Full Text:: Toome, M., Ohm, R. A., Riley, R. W., James, T. Y., Lazarus, K. L., Henrissat, B., Albu, S., Boyd, A

Creator:: Toome, Merje, Ohm, Robin A., Riley, Robert W., Boyd, Alexander, Spatafora, Joseph W., and et al.
Abstract:: Mixia osmundae (Basidiomycota, Pucciniomycotina) represents a monotypic class containing an unusual fern pathogen with incompletely understood biology. We sequenced and analyzed the genome of M. osmundae, focusing on genes that may provide some insight into its mode of pathogenicity and reproductive biology. Mixia osmundae has the smallest plant pathogenic basidiomycete...
Full Text:: , Wang CIA, Ayliffe MA, Kobe B, Ellis JG. 2006. Direct protein interaction underlies gene-for-gene

Creator:: Toome, Merje, Ohm, Robin A., Riley, Robert W., Boyd, Alexander, Spatafora, Joseph W., and et al.
Abstract:: Mixia osmundae (Basidiomycota, Pucciniomycotina) represents a monotypic class containing an unusual fern pathogen with incompletely understood biology. We sequenced and analyzed the genome of M. osmundae, focusing on genes that may provide some insight into its mode of pathogenicity and reproductive biology. Mixia osmundae has the smallest plant pathogenic basidiomycete...
Full Text:: AvrL567-A Melampsora lini AAS66948 AvrL567-B Melampsora lini AAS66949 AvrL567-C Melampsora lini AAS66953

Creator:: Allan, J. David, Smith, Sigrid D. P., McIntyre, Peter B., Biel, Reuben G., and et al.
Abstract:: Ecological restoration programs often attempt to maintain or enhance ecosystem services (ES), but fine-scale maps of multiple ES are rarely available to support prioritization among potential projects. Here we use agency reports, citizen science, and social media as data sources to quantify the spatial distribution of five recreational elements of...
Full Text:: priorities in the Laurentian Great Lakes J David Allan1*†, Sigrid DP Smith1†, Peter B McIntyre2, Christine

Creator:: Allan, J. David, Smith, Sigrid D. P., McIntyre, Peter B., Biel, Reuben G., and et al.
Abstract:: Ecological restoration programs often attempt to maintain or enhance ecosystem services (ES), but fine-scale maps of multiple ES are rarely available to support prioritization among potential projects. Here we use agency reports, citizen science, and social media as data sources to quantify the spatial distribution of five recreational elements of...
Full Text:: Bureau (NOAA 2012a,b). BLS data are subject to disclosure limitations to protect the anonymity of

Creator:: Das, Partha Pratim, Hendrix, David A., Apostolou, Effie, Kuintzle, Rachael, and et al.
Abstract:: Polycomb Repressive Complex 2 (PRC2) function and DNA methylation (DNAme) are typically correlated with gene repression. Here, we show that PRC2 is required to maintain expression of maternal microRNAs (miRNAs) and long non-coding RNAs (lncRNAs) from the Gtl2-Rian-Mirg locus, which is essential for full pluripotency of iPSCs. In the absence...
Full Text:: Mouse Embryonic Stem Cells Partha Pratim Das, David A. Hendrix, Effie Apostolou, Alice H. Buchner

Creator:: Das, Partha Pratim, Hendrix, David A., Apostolou, Effie, Kuintzle, Rachael, and et al.
Abstract:: Polycomb Repressive Complex 2 (PRC2) function and DNA methylation (DNAme) are typically correlated with gene repression. Here, we show that PRC2 is required to maintain expression of maternal microRNAs (miRNAs) and long non-coding RNAs (lncRNAs) from the Gtl2-Rian-Mirg locus, which is essential for full pluripotency of iPSCs. In the absence...
Full Text:: Pratim Das, David A. Hendrix, Effie Apostolou, ..., Konrad Hochedlinger, Jonghwan Kim, Stuart H. Orkin

Creator:: Prestat, Emmanuel, David, Maude M., Hultman, Jenni, Myrold, David D., and et al.
Abstract:: A new functional gene database, FOAM (Functional Ontology Assignments for Metagenomes), was developed to screen environmental metagenomic sequence datasets. FOAM provides a new functional ontology dedicated to classify gene functions relevant to environmental microorganisms based on Hidden Markov Models (HMMs). Sets of aligned protein sequences (i.e. ‘profiles’) were tailored to...
Full Text:: Metagenomes): a Hidden Markov Model (HMM) database with environmental focus Prestat, E., David, M. M

Creator:: Marias, Danielle E., Meinzer, Frederick C., Woodruff, David R., Shaw, David C., Lachenbruch, Barbara, Falk, Kristen, McKay, Jennifer, and et al.
Abstract:: See article for Abstract.
Full Text:: ) for uninfected (A) and infected (B) trees. Bolded values are significant at P≤0.05; n=13-17 trees. (A

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