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Creator:: Dolja, Valerian V. and Koonin, Eugene V.
Abstract:: Important progress in understanding replication, interactions with host plants, and evolution of closteroviruses enabled engineering of several vectors for gene expression and virus-induced gene silencing. Due to the broad host range of closteroviruses, these vectors expanded vector applicability to include important woody plants such as citrus and grapevine. Furthermore, large...
Resource Type:: Article
Full Text:: : Valerian V. Dolja, Department of Botany and Plant Pathology, Oregon State University, Cordley Hall 2082

Creator:: Koonin, Eugene V. and Dolja, Valerian V.
Abstract:: Viruses and/or virus-like selfish elements are associated with all cellular life forms and are the most abundant biological entities on Earth, with the number of virus particles in many environments exceeding the number of cells by one to two orders of magnitude. The genetic diversity of viruses is commensurately enormous...
Resource Type:: Article
Full Text:: Valerian V Dolja2 Available online at www.sciencedirect.com Viruses and/or virus-like selfish elements are

Creator:: Koonin, Eugene V. and Dolja, Valerian V.
Abstract:: Viruses were defined as one of the two principal types of organisms in the biosphere, namely, as capsid-encoding organisms in contrast to ribosome-encoding organisms, i.e., all cellular life forms. Structurally similar, apparently homologous capsids are present in a huge variety of icosahedral viruses that infect bacteria, archaea, and eukaryotes. These...
Resource Type:: Article
Full Text:: Elements Koonin, E. V., & Dolja, V. V. (2014). Virus World as an Evolutionary Network of Viruses and

Creator:: Krupovic, Mart, Dolja, Valerian V., and Koonin, Eugene V.
Abstract:: Plant viruses of the recently recognized family Amalgaviridae have monopartite double-stranded (ds) RNA genomes and encode two proteins: an RNA-dependent RNA polymerase (RdRp) and a putative capsid protein (CP). Whereas the RdRp of amalgaviruses has been found to be most closely related to the RdRps of dsRNA viruses of the...
Full Text:: genomes Krupovic, M., Dolja, V. V., & Koonin, E. V. (2015). Plant viruses of the Amalgaviridae family

Creator:: Koonin, Eugene V., Dolja, Valerian V., and Krupovic, Mart
Abstract:: Viruses and other selfish genetic elements are dominant entities in the biosphere, with respect to both physical abundance and genetic diversity. Various selfish elements parasitize on all cellular life forms. The relative abundances of different classes of viruses are dramatically different between prokaryotes and eukaryotes. In prokaryotes, the great majority...
Resource Type:: Article
Full Text:: viruses of eukaryotes: The ultimate modularity Eugene V. Koonin a,n, Valerian V. Dolja b, Mart Krupovic c

Creator:: Krupovic, Mart, Dolja, Valerian V., and Koonin, Eugene V.
Abstract:: Plant viruses of the recently recognized family Amalgaviridae have monopartite double-stranded (ds) RNA genomes and encode two proteins: an RNA-dependent RNA polymerase (RdRp) and a putative capsid protein (CP). Whereas the RdRp of amalgaviruses has been found to be most closely related to the RdRps of dsRNA viruses of the...

Creator:: Krupovic, Mart, Dolja, Valerian V., and Koonin, Eugene V.
Abstract:: Plant viruses of the recently recognized family Amalgaviridae have monopartite double-stranded (ds) RNA genomes and encode two proteins: an RNA-dependent RNA polymerase (RdRp) and a putative capsid protein (CP). Whereas the RdRp of amalgaviruses has been found to be most closely related to the RdRps of dsRNA viruses of the...
Resource Type:: Article

Creator:: Peremyslov, Valera V., Morgun, Eva A., Kurth, Elizabeth G., Makarova, Kira S., Koonin, Eugene V., and Dolja, Valerian V.
Abstract:: To characterize the mechanism through which myosin XI-K attaches to its principal endomembrane cargo, a yeast two-hybrid library of Arabidopsis thaliana cDNAs was screened using the myosin cargo binding domain as bait. This screen identified two previously uncharacterized transmembrane proteins (hereinafter myosin binding proteins or MyoB1/2) that share a myosin...
Resource Type:: Article
Full Text:: (www.plantcell.org) is: Valerian V. Dolja (doljav@ science.oregonstate.edu). W Online version contains Web-only data

Creator:: Peremyslov, Valera V., Mockler, Todd C., Filichkin, Sergei A., Fox, Samuel E., Jaiswal, Pankaj, Makarova, Kira S., Koonin, Eugene V., and Dolja, Valerian V.
Abstract:: Plants possess two myosin classes, VIII and XI. The myosins XI are implicated in organelle transport, filamentous actin organization, and cell and plant growth. Due to the large size of myosin gene families, knowledge of these molecular motors remains patchy. Using deep transcriptome sequencing and bioinformatics, we systematically investigated myosin...
Full Text:: Instructions for Authors (www.plantphysiol.org) is: Valerian V. Dolja (doljav@science.oregonstate.edu). [W

Creator:: Peremyslov, Valera V., Mockler, Todd C., Filichkin, Sergei A., Fox, Samuel E., Jaiswal, Pankaj, Makarova, Kira S., Koonin, Eugene V., and Dolja, Valerian V.
Abstract:: Plants possess two myosin classes, VIII and XI. The myosins XI are implicated in organelle transport, filamentous actin organization, and cell and plant growth. Due to the large size of myosin gene families, knowledge of these molecular motors remains patchy. Using deep transcriptome sequencing and bioinformatics, we systematically investigated myosin...

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