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Creator:: Naithani, Sushma, Partipilo, Christina M., Raja, Rajani, Elser, Justin L., and Jaiswal, Pankaj
Abstract:: FragariaCyc is a strawberry-specific cellular metabolic network based on the annotated genome sequence of Fragaria vesca L. ssp. vesca, accession Hawaii 4. It was built on the Pathway-Tools platform using MetaCyc as the reference. The experimental evidences from published literature were used for supporting/editing existing entities and for the addition...
Full Text:: . Partipilo, Rajani Raja, Justin L. Elser and Pankaj Jaiswal Department of Botany and Plant Pathology, Oregon

Creator:: Naithani, Sushma, Partipilo, Christina M., Raja, Rajani, Elser, Justin L., and Jaiswal, Pankaj
Abstract:: FragariaCyc is a strawberry-specific cellular metabolic network based on the annotated genome sequence of Fragaria vesca L. ssp. vesca, accession Hawaii 4. It was built on the Pathway-Tools platform using MetaCyc as the reference. The experimental evidences from published literature were used for supporting/editing existing entities and for the addition...

Creator:: Naithani, Sushma, Partipilo, Christina M., Raja, Rajani, Elser, Justin L., and Jaiswal, Pankaj
Abstract:: FragariaCyc is a strawberry-specific cellular metabolic network based on the annotated genome sequence of Fragaria vesca L. ssp. vesca, accession Hawaii 4. It was built on the Pathway-Tools platform using MetaCyc as the reference. The experimental evidences from published literature were used for supporting/editing existing entities and for the addition...

Creator:: Naithani, Sushma, Partipilo, Christina M., Raja, Rajani, Elser, Justin L., and Jaiswal, Pankaj
Abstract:: FragariaCyc is a strawberry-specific cellular metabolic network based on the annotated genome sequence of Fragaria vesca L. ssp. vesca, accession Hawaii 4. It was built on the Pathway-Tools platform using MetaCyc as the reference. The experimental evidences from published literature were used for supporting/editing existing entities and for the addition...
Resource Type:: Article

Creator:: Naithani, Sushma, Raja, Rajani, Waddell, Elijah N., Elser, Justin, Gouthu, Satyanarayana, Deluc, Laurent G., and Jaiswal, Pankaj
Abstract:: We have developed VitisCyc, a grapevine-specific metabolic pathway database that allows researchers to (i) search and browse the database for its various components such as metabolic pathways, reactions, compounds, genes and proteins, (ii) compare grapevine metabolic networks with other publicly available plant metabolic networks, and (iii) upload, visualize and analyze...
Resource Type:: Article
Full Text:: Rajani Raja constructed the VitisCyc, Sushma Naithani supervised overall curation pro- cess and Sushma

Creator:: Myburg, Alexander A., Grattapaglia, Dario, Tuskan, Gerald A., Vining, Kelly, Amarasinghe, Vindhya, Ranik, Martin, Naithani, Sushma, Elser, Justin, Liston, Aaron, Spatafora, Joseph W., Dharmawardhana, Palitha, Raja, Rajani, Strauss, Steven H., Jaiswal, Pankaj, and et al.
Abstract:: Eucalypts are the world’s most widely planted hardwood trees. Their outstanding diversity, adaptability and growth have made them a global renewable resource of fibre and energy. We sequenced and assembled >94% of the 640-megabase genome of Eucalyptus grandis. Of 36,376 predicted protein-coding genes, 34% occur in tandem duplications, the largest...
Full Text:: . Boyd18, Aaron Liston17,18, Joseph W. Spatafora17,18, Palitha Dharmwardhana17, Rajani Raja17, Christopher

Creator:: Myburg, Alexander A., Grattapaglia, Dario, Tuskan, Gerald A., Vining, Kelly, Amarasinghe, Vindhya, Ranik, Martin, Naithani, Sushma, Elser, Justin, Liston, Aaron, Spatafora, Joseph W., Dharmawardhana, Palitha, Raja, Rajani, Strauss, Steven H., Jaiswal, Pankaj, and et al.
Abstract:: Eucalypts are the world’s most widely planted hardwood trees. Their outstanding diversity, adaptability and growth have made them a global renewable resource of fibre and energy. We sequenced and assembled >94% of the 640-megabase genome of Eucalyptus grandis. Of 36,376 predicted protein-coding genes, 34% occur in tandem duplications, the largest...

Creator:: Myburg, Alexander A., Grattapaglia, Dario, Tuskan, Gerald A., Vining, Kelly, Amarasinghe, Vindhya, Ranik, Martin, Naithani, Sushma, Elser, Justin, Liston, Aaron, Spatafora, Joseph W., Dharmawardhana, Palitha, Raja, Rajani, Strauss, Steven H., Jaiswal, Pankaj, and et al.
Abstract:: Eucalypts are the world’s most widely planted hardwood trees. Their outstanding diversity, adaptability and growth have made them a global renewable resource of fibre and energy. We sequenced and assembled >94% of the 640-megabase genome of Eucalyptus grandis. Of 36,376 predicted protein-coding genes, 34% occur in tandem duplications, the largest...
Resource Type:: Article

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