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Filtering by: Creator Slavov, Gancho Trifonov Creator Rodgers Melnick, Eli

Contrasting patterns of evolution following whole genome versus tandem duplication events in Populus

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Rodgers-Melnick, Eli, Mane, Shrinivasrao P., Dharmawardhana, Palitha, Slavov, Gancho T., Crasta, Oswald R., Strauss, Steven H., Brunner, Amy M., and DiFazio, Stephen P.

Abstract:

Comparative analysis of multiple angiosperm genomes has implicated gene duplication in the expansion and diversification of many gene families. However, empirical data and theory suggest that whole-genome and small-scale duplication events differ with respect to the types of genes preserved as duplicate pairs. We compared gene duplicates resulting from a...

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. Mane,2,3 Palitha Dharmawardhana,4 Gancho T. Slavov,1,5 Oswald R. Crasta,2,6 Steven H. Strauss,4 Amy M
Genome resequencing reveals multiscale geographic structure and extensive linkage disequilibrium in the forest tree Populus trichocarpa

Creator:

Slavov, Gancho T., DiFazio, Stephen P., Martin, Joel, Schackwitz, Wendy, Muchero, Wellington, Rodgers-Melnick, Eli, Lipphardt, Mindie F., Pennacchio, Christa P., Hellsten, Uffe, Pennacchio, Len A., Gunter, Lee E., Ranjan, Priya, Vining, Kelly, Pomraning, Kyle R., Wilhelm, Larry J., Pellegrini, Matteo, Mockler, Todd C., Freitag, Michael, Geraldes, Armando, El-Kassaby, Yousry A., Mansfield, Shawn D., Cronk, Quentin C. B., Douglas, Carl J., Strauss, Steven H., Rokhsar, Dan, and Tuskan, Gerald A.

Abstract:

•Plant population genomics informs evolutionary biology, breeding, conservation and bioenergy feedstock development. For example, the detection of reliable phenotype–genotype associations and molecular signatures of selection requires a detailed knowledge about genome-wide patterns of allele frequency variation, linkage disequilibrium and recombination. •We resequenced 16 genomes of the model tree Populus trichocarpa...

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, Vancouver, BC, Canada, V6T 1Z4 Author for correspondence: Gancho T. Slavov Tel: +44 1970 823094 Email

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Contrasting patterns of evolution following whole genome versus tandem duplication events in Populus

Genome resequencing reveals multiscale geographic structure and extensive linkage disequilibrium in the forest tree Populus trichocarpa

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