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Creator:: Weitemier, Kevin, Straub, Shannon C. K., Fishbein, Mark, and Liston, Aaron
Abstract:: Despite knowledge that concerted evolution of high-copy loci is often imperfect, studies that investigate the extent of intragenomic polymorphisms and comparisons across a large number of species are rarely made. We present a bioinformatic pipeline for characterizing polymorphisms within an individual among copies of a high-copy locus. Results are presented...
Full Text:: author Kevin Weitemier, kevin.weitemier@science. oregonstate.edu Academic editor Gerard Lazo Additional

Creator:: Weitemier, Kevin, Straub, Shannon C. K., Fishbein, Mark, and Liston, Aaron
Abstract:: Despite knowledge that concerted evolution of high-copy loci is often imperfect, studies that investigate the extent of intragenomic polymorphisms and comparisons across a large number of species are rarely made. We present a bioinformatic pipeline for characterizing polymorphisms within an individual among copies of a high-copy locus. Results are presented...

Creator:: Weitemier, Kevin, Straub, Shannon C. K., Fishbein, Mark, and Liston, Aaron
Abstract:: Despite knowledge that concerted evolution of high-copy loci is often imperfect, studies that investigate the extent of intragenomic polymorphisms and comparisons across a large number of species are rarely made. We present a bioinformatic pipeline for characterizing polymorphisms within an individual among copies of a high-copy locus. Results are presented...
Resource Type:: Article

Creator:: Weitemier, Kevin, Straub, Shannon C. K., Cronn, Richard C., Fishbein, Mark, Schmickl, Roswitha, McDonnell, Angela, and Liston, Aaron
Abstract:: PREMISE OF THE STUDY: Hyb-Seq, the combination of target enrichment and genome skimming allows simultaneous data collection for low-copy nuclear genes and high-copy genomic targets for plant systematics and evolution studies. METHODS AND RESULTS: Genome and transcriptome assemblies for milkweed (Asclepias syriaca) were utilized to design enrichment probes for 3385...
Resource Type:: Article
Full Text:: skimming for plant phylogenomics 1 Kevin Weitemier2,7, Shannon C.K. Straub2,7, Richard C. Cronn3, Mark

Creator:: Muñoz-Rodríguez, Pablo, Carruthers, Tom, Wood, John R.I., Williams, Bethany R.M., Weitemier, Kevin, Kronmiller, Brent, Ellis, David, Anglin, Noelle L., Longway, Lucas, Harris, Stephen A., Rausher, Mark D., Kelly, Steven, Liston, Aaron, and Scotland, Robert W.
Abstract:: The sweet potato is one of the world’s most widely consumed crops, yet its evolutionary history is poorly understood. In this paper, we present a comprehensive phylogenetic study of all species closely related to the sweet potato and address several questions pertaining to the sweet potato that remained unanswered. Our...
Resource Type:: Article
Full Text:: -Rodríguez, Tom Carruthers, John R.I. Wood, Bethany R.M. Williams, Kevin Weitemier, Brent Kronmiller, David

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