Summertime wind stress along the coast of the northwestern United States typically exhibits intraseasonal oscillations (ISOs) with periods from ≈15 to 40 days, as well as fluctuations on the 2- to 6-day “weather-band” and 1-day diurnal time scales. Coastal upwelling of cool, nutrient-rich water is driven by extended periods of...
This report reviews the state of the California Current System (CCS) between winter 2012 and spring 2013, and includes observations from Washington State to Baja California. During 2012, large-scale climate modes indicated the CCS remained in a cool, productive phase present since 2007. The upwelling season was delayed north of...
This report reviews the state of the California Current System (CCS) between winter 2012 and spring 2013, and includes observations from Washington State to Baja California. During 2012, large-scale climate modes indicated the CCS remained in a cool, productive phase present since 2007. The upwelling season was delayed north of...
Resource managers at the state, federal, and tribal levels make decisions on a weekly to quarterly basis, and fishers operate on a similar timeframe. To determine the potential of a support tool for these efforts, a seasonal forecast system is experimented with here. JISAO’s Seasonal Coastal Ocean Prediction of the...
Resource managers at the state, federal, and tribal levels make decisions on a weekly to quarterly basis, and fishers operate on a similar timeframe. To determine the potential of a support tool for these efforts, a seasonal forecast system is experimented with here. JISAO’s Seasonal Coastal Ocean Prediction of the...
The 20-year US GLOBEC (Global Ocean Ecosystem Dynamics)
program examined zooplankton populations and their predators in four coastal
marine ecosystems. Program scientists learned that environmental controls on
zooplankton vital rates, especially the timing and magnitude of reproduction, growth,
life-cycle progression, and mortality, determine species population dynamics,
seasonal and spatial distributions,...
The 20-year US GLOBEC (Global Ocean Ecosystem Dynamics)
program examined zooplankton populations and their predators in four coastal
marine ecosystems. Program scientists learned that environmental controls on
zooplankton vital rates, especially the timing and magnitude of reproduction, growth,
life-cycle progression, and mortality, determine species population dynamics,
seasonal and spatial distributions,...
Research on regulatory mechanisms in biological populations often focuses on environmental covariates. An integrated
approach that combines environmental indices with organismal-level information can provide additional insight on
regulatory mechanisms. Survival of spring/summer Snake River Chinook salmon (Oncorhynchus tshawytscha) is consistently
low whereas some adjacent populations with similar life histories experience...
Research on regulatory mechanisms in biological populations often focuses on environmental covariates. An integrated
approach that combines environmental indices with organismal-level information can provide additional insight on
regulatory mechanisms. Survival of spring/summer Snake River Chinook salmon (Oncorhynchus tshawytscha) is consistently
low whereas some adjacent populations with similar life histories experience...
Larval supply determines year-class strength of fisheries and complex ecological
interactions among adults of benthic marine species. In upwelling regions, a latitudinal cline in
the intensity and persistence of upwelling is thought to affect larval advection and recruitment,
thereby regulating the intensity of interactions in adult populations and communities. We...
Larval supply determines year-class strength of fisheries and complex ecological
interactions among adults of benthic marine species. In upwelling regions, a latitudinal cline in
the intensity and persistence of upwelling is thought to affect larval advection and recruitment,
thereby regulating the intensity of interactions in adult populations and communities. We...
Significant seabird mortality on the Oregon (OR) and Washington (WA) coast in 2009 has been attributed
to a massive bloom of the dinoflagellate Akashiwo sanguinea (K. Hirasaka) G. Hansen & Ø. Moestrup.
Initial, albeit limited, observations suggested this bloom began in WA and reached OR waters through
southward transport. Here,...
Significant seabird mortality on the Oregon (OR) and Washington (WA) coast in 2009 has been attributed
to a massive bloom of the dinoflagellate Akashiwo sanguinea (K. Hirasaka) G. Hansen & Ø. Moestrup.
Initial, albeit limited, observations suggested this bloom began in WA and reached OR waters through
southward transport. Here,...
Resource managers at the state, federal, and tribal levels make decisions on a weekly to quarterly basis, and fishers operate on a similar timeframe. To determine the potential of a support tool for these efforts, a seasonal forecast system is experimented with here. JISAO’s Seasonal Coastal Ocean Prediction of the...
In 2014, the California Current (~28˚–48˚N) saw average, or below average, coastal upwelling and relatively low productivity in most locations, except from 38˚–43˚N during June and July. Chlorophyll-a levels were low throughout spring and summer at most locations, except in a small region around 39˚N. Catches of juvenile rockfish (an...
The accumulation of domoic acid (DA) and saxitoxins (STX), phycotoxins produced by some species of Pseudo-nitzschia and Alexandrium, respectively, in coastal food webs are a focus of research on the West Coast of the United States due to the deleterious effects they have on coastal ecosystems and economies. Results are...
In this study, we assessed trophic interactions between microplankton and copepods by studying the functional response of egg production rates (EPR; eggs female⁻¹day⁻¹) of the copepod Calanus marshallae to variations in microplankton biomass, species composition and community structure. Female C. marshallae and phytoplankton water samples were collected biweekly at an...
The zooplankton of the northern California Current are typically characterized by an abundance of lipid-rich copepods that support rapid growth and survival of ecologically, commercially, and recreationally valued fish, birds, and mammals. Disruption of this food chain and reduced ecosystem productivity are often associated with climatic variability such as El...
An introduced population of European green crabs Carcinus maenas was established in San Francisco Bay (California, USA) prior to 1989. Subsequently, their larvae were likely carried northward into the embayments of Oregon, Washington (USA), and British Columbia (Canada) by the unusually strong Davidson Current during the winter of the El...
Ocean conditions can greatly impact lower trophic level prey assemblages in marine ecosystems, with effects of ocean state propagating to higher trophic levels. In many regions throughout their range, common murre (Uria aalge) exhibit narrow dietary breadth in feeding chicks and therefore are vulnerable to recruitment failures of dominant prey...
Fisheries oceanography is the study of ecological relationships between fishes and the dynamics of their marine environments and aims to characterize the physical, chemical, and biological factors that affect the recruitment and abundance of harvested species. A recent push within the fisheries management community is toward ecosystem-based management. Here, we...
In 2013, the California current was dominated by
strong coastal upwelling and high productivity. Indices
of total cumulative upwelling for particular coastal
locations reached some of the highest values on record.
Chlorophyll a levels were high throughout spring and
summer. Catches of upwelling-related fish species were
also high. After a...
The community of trophically transmitted marine parasites of juvenile coho (Oncorhynchus kisutch) and Chinook
(Oncorhynchus tshawytscha) salmon across 8 years (2002–2009) was related to indices of physical and biological ocean conditions
and adult returns. When the biomass of lipid-poor, southern origin copepods in the coastal ocean was high during juvenile...
Significant seabird mortality on the Oregon (OR) and Washington (WA) coast in 2009 has been attributed to a massive bloom of the dinoflagellate Akashiwo sanguinea (K. Hirasaka) G. Hansen & Ø. Moestrup. Initial, albeit limited, observations suggested this bloom began in WA and reached OR waters through southward transport. Here,...
Research on regulatory mechanisms in biological populations often focuses on environmental covariates. An integrated
approach that combines environmental indices with organismal-level information can provide additional insight on
regulatory mechanisms. Survival of spring/summer Snake River Chinook salmon (Oncorhynchus tshawytscha) is consistently
low whereas some adjacent populations with similar life histories experience...
Larval supply determines year-class strength of fisheries and complex ecological
interactions among adults of benthic marine species. In upwelling regions, a latitudinal cline in
the intensity and persistence of upwelling is thought to affect larval advection and recruitment,
thereby regulating the intensity of interactions in adult populations and communities. We...
This study addresses the occurrence, severity, and extent of hypoxia over the continental shelf of the northern
California Current (40–48.5°N latitude) from 1998 to 2012. Clear seasonal trends exist in the timing and duration
of hypoxia. The highest bottom-water dissolved oxygen concentrations occurred from November to March, and
levels below...
Coastal upwelling in the northern California Current
varies seasonally, with downwelling in winter and upwelling
in summer, resulting in pronounced variability in
hydrography, nutrients, phytoplankton biomass, and species
composition. Winter was characterized by moderate concentrations
of nitrate and silicate (averages of 10 and 18 μM,
respectively) and low concentrations of...
The goal of the Pacific Ocean Boundary Ecosystem and Climate Study
(POBEX) was to diagnose the large-scale climate controls on regional transport
dynamics and lower trophic marine ecosystem variability in Pacific Ocean boundary
systems. An international team of collaborators shared observational and eddy-resolving
modeling data sets collected in the Northeast...
The 20-year US GLOBEC (Global Ocean Ecosystem Dynamics) program examined zooplankton populations and their predators in four coastal marine ecosystems. Program scientists learned that environmental controls on zooplankton vital rates, especially the timing and magnitude of reproduction, growth, life-cycle progression, and mortality, determine species population dynamics, seasonal and spatial distributions,...
This report reviews the state of the California Current System (CCS) between winter 2012 and spring 2013, and includes observations from Washington State to Baja California. During 2012, large-scale climate modes indicated the CCS remained in a cool, productive phase present since 2007. The upwelling season was delayed north of...
Diets of juvenile coho Oncorhynchus kisutch and Chinook O. tshawytscha salmon
are made up primarily of winter-spawning fish taxa in the late-larval and early juvenile stages that
are undersampled in plankton and larger trawl nets. Although we have no direct measure of the
availability of fish prey important to juvenile...
Most modeling and statistical approaches encourage simplicity, yet ecological processes are often complex, as they are influenced by numerous dynamic environmental and biological factors. Pacific salmon abundance has been highly variable over the last few decades and most forecasting models have proven inadequate, primarily because of a lack of understanding...
The state of the California Current System (CCS)
since spring 2011 has evolved in response to dissipation
of La Niña through spring and summer, resurgence of
cooler La Niña conditions in fall and winter, and finally
a transition towards ENSO-neutral conditions in spring
2012. The resurgence of La Niña was...
The synchrony between coastal and shelf-slope copepod communities was investigated in the northern California Current (NCC) system, a strong upwelling zone, using time series of zooplankton sampled from a nearshore station (9 km offshore, water depth 62 m) and a shelf-slope station (46 km offshore, water depth 297 m). Long-term...
We examined variability in growth rate during the larval stage of northern anchovy (Engraulis mordax) in response to physical and biological environmental factors in 2005 and 2006. The onset of spring upwelling was anomalously delayed by 2–3 months until mid-July in 2005; in contrast, spring upwelling in 2006 began as...
Generalized additive models (GAMs) were used to investigate the relationships between annual recruitment of natural coho salmon (Oncorhynchus kisutch) from Oregon coastal rivers and indices of the physical ocean environment. Nine indices were examined, ranging from large-scale ocean indicators, e.g., Pacific Decadal Oscillation (PDO), to indicators of the local ecosystem...
Euphausiid krill play a critical role in coastal and oceanic food webs, linking primary producers to upper trophic levels. In addition, some species support commercial fisheries worldwide. Despite their ecological importance, the genetics of these important species remain poorly described. To improve our understanding of the genetics of these ecological...
Early ocean residence is considered a critical period for juvenile salmon although specific survival mechanisms are often unidentified and may vary by species or life stage. Columbia River spring-run Chinook salmon Oncorhynchus tshawytscha abundance has declined dramatically since the early 1900s. To elucidate mechanisms of early marine survival, we tested...
Climatic effects in the ocean at the community level are poorly described, yet accurate predictions about ecosystem responses to changing environmental conditions rely on understanding biotic responses in a food-web context to support knowledge about direct biotic responses to the physical environment. Here we conduct time-series analyses with multivariate autoregressive...
Upwelling in eastern boundary current systems is a primary driver of ecosystem productivity. Typically, peak upwelling occurs during spring and summer, but winter upwelling may also be important to ecosystem functions. In this study, we investigated the hypothesis that winter and spring/summer upwelling, operating through indirect trophic interactions, are important...
Seabirds have often been proposed as environmental indicators. Beached bird data may provide an additional data source and such data is efficacious because it can reliably be collected by volunteers. In addition to anthropogenic factors, such as oil spills, changes in the ocean-atmosphere can affect carcass beaching rate in 3...
The impact of mesoscale eddies on the spatial distribution of zooplankton biomass was analysed using data from the Arabian Sea and the Black Sea. The highest values of spatial variance of zooplankton biomass in the upper 100 to 150 m were found in regions with maximum available potential energy of...
During the summer of 1994, 1996, and 1997, we conducted hydrographic and plankton surveys of the upper 70 m in the nearshore, the continental shelf, and off shelf oceanic waters off Oregon, USA. Copepod densities and biomass were estimated along 4 transects from each cruise. The on shelf copepod biomass...
Unusual collections of several euphausiid, chaetognath, and copepod species help elucidate
the effects of the strong 1997/1998 El Niño off the central Oregon, USA, coast. Furcilia of Nyctiphanes simplex, a euphausiid typically found only as far north as central California, were collected in bi-weekly nearshore samples between December 1997 and...
The Moult Rate (MR) method has been used widely to derive stage-specific growth rates in juvenile copepods. It is the most common field-based method. Unfortunately, the equation underlying the method is wrong and, consequently, large errors in juvenile growth rate estimates are widespread. The equation derives growth from the mean...
We compared brood sizes among adult female Euphausia pacifica Hansen, 1911 from 3
populations in the North Pacific: Puget Sound, Washington, USA; Toyama Bay, Japan; and the Oregon coast, USA. Additionally, we used multiple linear regression models to compare the interspecific brood size as a function of female length and...
Alongshore transport was estimated from the gridded AVISO altimeter data and water level data from NOAA tide gauges (1993–2010) for the northern California Current (NCC) system. The biomass of the cold neritic copepods including Calanus marshallae, Pseudocalanus mimus and Acartia longiremis (dominants in the eastern Bering Sea, coastal Gulf of...
Gravid adult female Euphausia pacifica were collected off Newport, Oregon, USA and transferred to the laboratory, where females spawned eggs, eggs hatched, and larvae were reared at 10.5 degrees C. We fed 4 cohorts of larvae to excess with a combination of phytoplankton species and monitored them daily until they...
Large rivers represent gateways for the transport of
terrigenous and anthropogenic material to the coastal ocean.
Here we document a ∼700 km2 recirculation or bulge associated
with the Columbia River plume that retains recently discharged
river water sufficiently to create a regional bioreactor.
Fueled by a fluvial nitrate source, this...
In 2005, the onset of spring conditions in the physics
of the coastal ocean (lowered sea level, spin-up of
vertically-sheared equatorward coastal jet) came about 50
days later than average off Newport Oregon, on May 24.
There was a further delay of 50 days before the subsurface
upwelled water penetrated...
This report summarizes physical and biological conditions in the California Current System (CCS), from Oregon to Baja California, in 2001 and 2002. The principal sources of the observations described here are the CalCOFI (California Cooperative Oceanic Fisheries Investigations), IMECOCAL (Investigaciones Mexicanas de la Corriente de California), and U.S. GLOBECLTOP (Global...
This report summarizes the recent state of the California Current System (CCS), primarily during the period of April 2004 to January 2005. The report is based on observations made between Oregon and Baja California by various ocean observing programs. The CCS was not forced by any coherent basin-wide processes during...
This report describes the state of the California Current System (CCS)—meteorological, physical, chemical, and biological—from January 2003 to the spring of 2004. The area covered in this report ranges from Oregon coastal waters to southern Baja California. Over the past year, most physical, chemical, and biological parameters were close to...
During the W7711A cruise, from November 5 through November
13, 1977, a series of measurements were made on the hydrography, suspended particulate matter (spm), nutrients, first and second trophic level biomasses, primary productivity and zooplankton species for the purpose of gaining concurrent winter time information on these parameters. The cruise...