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Filtering by: Creator Salamov, Asaf Decade 2010-2019

Comparative Genome Structure, Secondary Metabolite, and Effector Coding Capacity across Cochliobolus Pathogens

Creator:

Condon, Bradford J., Leng, Yueqiang, Wu, Dongliang, Bushley, Kathryn E., Ohm, Robin A., Otillar, Robert, Martin, Joel, Schackwitz, Wendy, Grimwood, Jane, MohdZainudin, NurAinIzzati, Xue, Chunsheng, Wang, Rui, Manning, Viola A., Dhillon, Braham, Tu, Zheng Jin, Steffenson, Brian J., Salamov, Asaf, Sun, Hui, Lowry, Steve, LaButti, Kurt, Han, James, Copeland, Alex, Lindquist, Erika, Barry, Kerrie, Schmutz, Jeremy, Baker, Scott E., Ciuffetti, Lynda M., Grigoriev, Igor V., Zhong, Shaobin, and Turgeon, B. Gillian

Abstract:

The genomes of five Cochliobolus heterostrophus strains, two Cochliobolus sativus strains, three additional Cochliobolus species (Cochliobolus victoriae, Cochliobolus carbonum, Cochliobolus miyabeanus), and closely related Setosphaeria turcica were sequenced at the Joint Genome Institute (JGI). The datasets were used to identify SNPs between strains and species, unique genomic regions, core secondary...

Resource Type:

Article
The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

Creator:

Floudas, Dimitrios, Yadav, Jagjit S., Aerts, Andrea, Benoit, Isabelle, Boyd, Alex, Carlson, Alexis, Copeland, Alex, Coutinho, Pedro M., de Vries, Ronald P., Ferreira, Patricia, Findley, Keisha, Binder, Manfred, Foster, Brian, Gaskell, Jill, Glotzer, Dylan, Gorecki, Pawel, Heitman, Joseph, Hesse, Cedar, Hori, Chiaki, Igarashi, Kiyohiko, Jurgens, Joel A., Kallen, Nathan, Riley, Robert, Kersten, Phil, Kohler, Annegret, Kues, Ursula, Kumar, T. K. Arun, Kuo, Alan, LaButti, Kurt, Larrondo, Luis F., Lindquist, Erika, Ling, Albee, Lombard, Vincent, Barry, Kerrie, Lucas, Susan, Lundell, Taina, Martin, Rachael, McLaughlin, David J., Morgenstern, Ingo, Morin, Emanuelle, Murat, Claude, Nagy, Laszlo G., Nolan, Matt, Ohm, Robin A., Blanchette, Robert A., Patyshakuliyeva, Aleksandrina, Rokas, Antonis, Ruiz-Duenas, Francisco J., Sabat, Grzegorz, Salamov, Asaf, Samejima, Masahiro, Schmutz, Jeremy, Slot, Jason C., St. John, Franz, Stenlid, Jan, Henrissat, Bernard, Sun, Hui, Sun, Sheng, Syed, Khajamohiddin, Tsang, Adrian, Wiebenga, Ad, Young, Darcy, Pisabarro, Antonio, Eastwood, Daniel C., Martin, Francis, Cullen, Dan, Martínez, Angel T., Grigoriev, Igor V., Hibbett, David S., Otillar, Robert, and Spatafora, Joseph W.

Abstract:

Wood is a major pool of organic carbon that is highly resistant to decay, owing largely to the presence of lignin. The only organisms capable of substantial lignin decay are white rot fungi in the Agaricomycetes, which also contains non–lignin-degrading brown rot and ectomycorrhizal species. Comparative analyses of 31 fungal...

Resource Type:

Article