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Filtering by: Creator Ayres, James Lee Decade 1990-1999

Algorithms for string matching with applications in molecular biology

Creator:

Holloway, James Lee

Abstract:

As the volume of genetic sequence data increases due to improved sequencing techniques and increased interest, the computational tools available to analyze the data are becoming inadequate. This thesis seeks to improve a few of the computational methods available to access and analyze data in the genetic sequence databases. The...

Resource Type:

Dissertation
Mars atmospheric dynamics as simulated by the NASA Ames general circulation model, 3. Winter quasi-stationary eddies

Creator:

Barnes, Jeffrey R., Haberle, Robert M., Pollack, James B., Lee, Hilda, and Schaeffer, James

Abstract:

A set of simulations with the NASA Ames Mars general circulation model (GCM) has been analyzed to define the basic properties and dynamics of quasi-stationary eddy circulations in the winter hemisphere. These circulations, differing substantially from those in low latitudes and the summer hemisphere, extended from the surface to the...

Resource Type:

Article
Walking tree heuristics for biological string alignment, gene location, and phylogenies

Creator:

Oregon State University. Dept. of Computer Science, Cull, Paul, 1943-, Holloway, James Lee, and Cavener, Jeffrey Douglas

Abstract:

Basic biological information is stored in strings of nucleic acids (DNA, RNA) or amino acids (proteins). Teasing out the meaning of these strings is a central problem of modern biology. Matching and aligning strings brings out their shared characteristics. Although string matching is well-understood in the edit-distance model, biological strings...

Resource Type:

Research Paper
Western larch seed-contaminating fungi and treatments to reduce infection and improve germination

Creator:

James, Robert L., Dumroese, R. Kasten, Wenny, David Lee, and United States. Forest Service. Northern Region

Resource Type:

Technical Report