New approaches are needed to quantify and understand spatial patterns of stream fishes and their environment. Concepts in riverine ecology emphasize the importance of thermal zones and gradual longitudinal changes in physical habitat and biota, but little is known about spatial variability within the river continuum. I present a conceptual...
This thesis focuses upon whether stressful aspects of an organism's environment are reflected by that organism's shape. It presents an application of the powerful thin-plate spline and relative warp methods from morphometric analysis to demonstrate the overall utility of morphometrics in detecting environmental stress in an estuarine flatfish, the English...
Conceptually, the dynamics of wood in streams can be viewed in terms of input and in-channel processes. Input processes are associated with both the riparian (tree fall, bank cutting, windthrow) and upslope forests (mass failures). In-channel processes include log breakage, movement, and decomposition. A mechanistic view of these processes is...
Because of large declines in abundance of many Eastern Pacific rockfish populations (Genus Sebastes), there has been an increasing effort to improve our understanding of the role of spawning population characteristics and individual reproductive success in recruitment variability and population dynamics. Current methods for assessing sex and maturational status in...
The genetic basis of adaptation is complex as many fitness-related traits are quantitative and likely influenced by multiple genes with variable effects across different selective environments. One important adaptation for anadromous Chinook salmon (Oncorhynchus tshawytscha) is the time at which individuals return to natal breeding sites within a reproductive season....
The decline of many Pacific salmon stocks has stimulated interest in the early life history and habitat requirements of juvenile salmon. Although estuarine habitat associations of juvenile salmon have been investigated in many coastal areas of the eastern Pacific Ocean, until recently, little was known about juvenile salmonid ecology within...
The development of assays for stress in marine fishes is vital for studying the impacts of bycatch in fisheries and for determining the health of fish being cultured or used in research. This research developed behavioral and physiological assays for stress in juvenile sablefish, Anoplopoma fimbria, a species that comprises...
The extent of biological invasions, their role on the feeding of
native fishes and their impact on community stability were
investigated in Alsea Bay and Yaquina Bay, two estuaries on the
central Oregon coast, USA. Most nonindigenous species (NIS)
introduced in these intermediately invaded estuaries are
considered byproducts of culturing...
A series of experiments with Aeromonas salmonicida and infectious
hematopoietic necrosis virus (IHNV) were carried out to determine dynamics of the
spread of infection in chinook salmon (1.2-1.98g) and rainbow trout (1.2-3.1g). It was
found in experiments with A. salmonicida that fish infected by bath immersion became
infectious at 4...
The overall goal of this study was to identify multiple scales of habitat use and habitat electivity by redband/steelhead trout and define the limiting factors affecting the distribution patterns of this species during summer flows.
The main objective in chapter 2 was to identify the most important habitat associations that...
The purpose of this research was to explore the impact of finfish bycatch on the ocean shrimp Pandalus jordani fishery using two methods. One method looked at the breakage of the shrimp by finfish bycatch in the nets. The other looked at the impact of bycatch on fishing decisions. At-sea...
Sablefish, Anoplopoma fimbria, is a valuable North Pacific Ocean species caught in several commercial fisheries and is often discarded due to size or catch limits. Managers must account for the mortality of discarded fish to assess fish populations and harvest impacts, yet discard mortality rates of specific fisheries are generally...
The present study investigated the neurocrine and neuroendocrine control of locomotor activity, habitat choice, social behavior, and migratory behavior in juvenile chinook salmon (Oncorhynchus tshawytscha). This was achieved by the manipulation of three neurotransmitter systems; serotonin (5-HT), dopamine (DA), y-amino-n-butyric acid (GABA) and the neuropeptide corticotropin-releasing hormone (CRH). Chemicals were...
Streams in the Alsea and Nestucca Sub-Basins were characterized using suites of habitat attributes at the pool and reach scales. These suites were analyzed using a multivariate process with the Multiple Response Permutation Procedure (MRPP) to test for differences in groups. There were differences in the suite of habitat variables...
Seasonally, in 1998 and 1999, I examined spatial and temporal variation in fish assemblages of agricultural, forested, and acid mine drainage tributaries within the Wayne National Forest (WNF) in southern Ohio. Land use and natural disturbance explained patterns in stream fish assemblages. Creek chub and green sunfish were present in...
The coexistence of multiple predators may have important consequences for the structure and function of communities. Interactions between predators may strongly affect their combined direct and indirect effects on prey populations and lower trophic levels. Predators often have size-structured populations, which may result in intraguild predation characterized by complex trophic...
I compared hand sampling, two-pass multiple removal sampling, mark-recapture and catchability-based population estimates for the Pacific giant salamander (Dicamptodon tenebrosus) at 22 sites in 11 streams of Cascade Mountains of Oregon. Mark-recapture and catchability-based population estimates were not significantly different (p 0.86). Hand sampling and two-pass multiple removal population estimates...
The littoral zones of seven reservoirs in the southern Willamette Valley of Oregon were sampled with a boat electroshocker during the summer months of 1995 and 1996. Shoreline substrates were inventoried before sampling sites were randomly selected. Sampling sites consisted of 9 of 12 possible habitat types including four substrate...
Recognizing the importance of native black cottonwood-dominated riparian
forests is especially important to preserve, protect, and manage for biodiversity in
the Willamette River Valley. Species composition, structure, and biomass along a
successional gradient from stand initiation to late succession of black cottonwood
(Populus balsamfera L. subsp. trichocarpa (T. & G.)...
The West Fork Smith River, a 69 km2 watershed in the Coast Range of Oregon, is prone to short periods of very high water temperature in mid-summer due to a combination of human and natural influences. In the summers of 2003 and 2004 more than 400 juvenile coho salmon regularly...