Marine ecosystems can be exposed to natural and anthropogenic disturbances that can lead to ecological failures. Marine reserves have been lately suggested to protect marine populations and communities that have been affected by habitat destruction and harvest. This research evaluates the potential role of two marine reserves established in Oregon...
Understanding how populations within a species interact across various geographic and temporal scales is fundamental to developing appropriate conservation strategies. I examined the geographic variation in genetic and meristic characters of coastal cutthroat trout (Oncorhynchus clarki clarki) based on
approximately 1,400 fish sampled from 54 populations spanning their distributional range...
With increased resource development on the western Arctic coastal plain of Alaska (especially within the oil extraction industry) it is important to understand the basic life history attributes of whitefish stocks in the region in order to ensure appropriate management. These fish are a crucial part of subsistence harvests for...
This thesis examined the influence of fall-spawning coho salmon on the density, growth rate, body condition, and survival to outmigration of juvenile coho salmon rearing in beaver ponds on the Copper River Delta, Alaska. During the fall of 1999 and 2000 fish rearing in ponds that received spawning salmon were...
In the present study, the potential of low-melting point lipids, namely methyl palmitate (MP) and menhaden stearine (MS), were studied for delivery of water-soluble materials to fish larvae. Addition of the solid emulsifier, sorbitan monopalmitate (SMP) resulted in higher RE compared to the liquid emulsifier sorbitan sesquioleate (SSO). Additions of...
Low copy number anonymous nuclear loci were used to search for species markers in four species of Klamath Basin suckers. We sequenced 28 randomly chosen loci representing 10,421 bp; 21 loci were similar to sequences in GenBank. Eight fixed sequence differences were found among Klamath species. Locus 120 contained rare...
Sardines and anchovies are small pelagic fishes that support important commercial fisheries around the world. This project reviews the inverse cyclic behavior in the abundance of these two stocks, which is a striking feature in many regions. In addition, the project used qualitative loop analysis techniques to analyze the feasible...
Shellfish growers have expressed interest in developing high-yielding oyster strains through selective breeding. This dissertation has three objectives to help determine the effects of genetic and environmental variation on production traits (body weight, survival, and yield) of Pacific oysters grown in the Pacific Northwest. Objective 1: Determine if relative family...
Stock assessments for many U.S. Pacific coast groundfish stocks are developed using the catch-at-age method known as Stock Synthesis. In this work a simulation package was developed and used to evaluate the sensitivity of the Stock Synthesis program. More specifically, the evaluation focused on the impacts of input data errors...
Fishery dependent data--length distributions, sex ratios, maturity schedules, and species composition of landed catches--are necessary for stock assessments. These data are currently collected by state port biologists using a sampling design that randomly selects samples from a small percentage of a very large target population. Sampling programs may need to...
Although the effects of extrinsic barriers to dispersal have increasingly been shown to
play a large role in the structuring of contemporary genetic diversity, describing the
relationship between landscape structure, stochastic disturbance, and genetic diversity
remains a major challenge. Here, environmental features for 27 barrier-isolated
populations (2,232 individuals) of coastal...
Aquatic insects that emerge out of streams to mate represent a potential energy
flux to terrestrial food webs. The relative success of an individual aquatic adult insect
is whether it survives long enough to produce offspring, i.e. mate and return to the
stream to oviposit eggs. Some characteristics of the...
Culverts and road crossings potentially create barriers that impede or prevent
movement and migration of all life stages of resident and anadromous fish. There
have been very few studies of juvenile salmonid movements through retrofitted
(baffled) culverts in the field. Two separate studies were conducted to assess
juvenile cutthroat trout...
Pleuronectid flatfish are generally thought to utilize stereotypical anti-predator behavior to reduce encounters with potential predators, including burial, maintaining a low profile on the bottom, cryptic coloration, and reduced activity. However, a series of laboratory experiments demonstrate significantly different predation rates on juvenile (Age-0) English sole (Parophrys vetulus), northern rock...
The objective of my study was to examine differences in riparian tree and shrub composition associated with adult aquatic emergence and implications for terrestrial spiders in these sites. Seasonal abundance and biomass of adult emergent aquatic insects, riparian arthropod abundances and spider densities were compared between conifer- and hardwood-dominated sites...
Sablefish, Anoplopoma fimbria, is a valuable North Pacific Ocean species caught in several commercial fisheries and is often discarded due to size or catch limits. Managers must account for the mortality of discarded fish to assess fish populations and harvest impacts, yet discard mortality rates of specific fisheries are generally...
Seasonal emergent wetlands in the Pacific Northwest have not been regarded traditionally as fish rearing habitat, despite access to such habitat when river flows overtop riverbanks and connect to the floodplain. As a result, restoration and enhancement projects to remediate for the loss of such wetland habitat are being implemented...
Relationships between the structure and composition of riparian vegetation
with channel morphology were examined in three montane meadow streams in the
headwaters of the Upper Grande Ronde River and North Fork John Day River in the
Blue Mountains, northeast Oregon. Vegetation composition, root biomass, and
channel morphology cross-sections were sampled...
I compared hand sampling, two-pass multiple removal sampling, mark-recapture and catchability-based population estimates for the Pacific giant salamander (Dicamptodon tenebrosus) at 22 sites in 11 streams of Cascade Mountains of Oregon. Mark-recapture and catchability-based population estimates were not significantly different (p 0.86). Hand sampling and two-pass multiple removal population estimates...
Longitudinal patterns of fish and benthic invertebrate distribution and
habitat use were similar in Thomas Creek, Oregon but clarity of these patterns
differed. I studied fish and aquatic invertebrates simultaneously, at multiple
scales, and used multivariate statistical techniques to compare responses to the
same environmental conditions. Both types of organisms...