New approaches are needed to quantify and understand spatial patterns of stream fishes and their environment. Concepts in riverine ecology emphasize the importance of thermal zones and gradual longitudinal changes in physical habitat and biota, but little is known about spatial variability within the river continuum. I present a conceptual...
This thesis focuses upon whether stressful aspects of an organism's environment are reflected by that organism's shape. It presents an application of the powerful thin-plate spline and relative warp methods from morphometric analysis to demonstrate the overall utility of morphometrics in detecting environmental stress in an estuarine flatfish, the English...
Conceptually, the dynamics of wood in streams can be viewed in terms of input and in-channel processes. Input processes are associated with both the riparian (tree fall, bank cutting, windthrow) and upslope forests (mass failures). In-channel processes include log breakage, movement, and decomposition. A mechanistic view of these processes is...
Because of large declines in abundance of many Eastern Pacific rockfish populations (Genus Sebastes), there has been an increasing effort to improve our understanding of the role of spawning population characteristics and individual reproductive success in recruitment variability and population dynamics. Current methods for assessing sex and maturational status in...
The genetic basis of adaptation is complex as many fitness-related traits are quantitative and likely influenced by multiple genes with variable effects across different selective environments. One important adaptation for anadromous Chinook salmon (Oncorhynchus tshawytscha) is the time at which individuals return to natal breeding sites within a reproductive season....
The decline of many Pacific salmon stocks has stimulated interest in the early life history and habitat requirements of juvenile salmon. Although estuarine habitat associations of juvenile salmon have been investigated in many coastal areas of the eastern Pacific Ocean, until recently, little was known about juvenile salmonid ecology within...
The development of assays for stress in marine fishes is vital for studying the impacts of bycatch in fisheries and for determining the health of fish being cultured or used in research. This research developed behavioral and physiological assays for stress in juvenile sablefish, Anoplopoma fimbria, a species that comprises...
The extent of biological invasions, their role on the feeding of
native fishes and their impact on community stability were
investigated in Alsea Bay and Yaquina Bay, two estuaries on the
central Oregon coast, USA. Most nonindigenous species (NIS)
introduced in these intermediately invaded estuaries are
considered byproducts of culturing...
A series of experiments with Aeromonas salmonicida and infectious
hematopoietic necrosis virus (IHNV) were carried out to determine dynamics of the
spread of infection in chinook salmon (1.2-1.98g) and rainbow trout (1.2-3.1g). It was
found in experiments with A. salmonicida that fish infected by bath immersion became
infectious at 4...
The overall goal of this study was to identify multiple scales of habitat use and habitat electivity by redband/steelhead trout and define the limiting factors affecting the distribution patterns of this species during summer flows.
The main objective in chapter 2 was to identify the most important habitat associations that...
The purpose of this research was to explore the impact of finfish bycatch on the ocean shrimp Pandalus jordani fishery using two methods. One method looked at the breakage of the shrimp by finfish bycatch in the nets. The other looked at the impact of bycatch on fishing decisions. At-sea...
Sablefish, Anoplopoma fimbria, is a valuable North Pacific Ocean species caught in several commercial fisheries and is often discarded due to size or catch limits. Managers must account for the mortality of discarded fish to assess fish populations and harvest impacts, yet discard mortality rates of specific fisheries are generally...
The present study investigated the neurocrine and neuroendocrine control of locomotor activity, habitat choice, social behavior, and migratory behavior in juvenile chinook salmon (Oncorhynchus tshawytscha). This was achieved by the manipulation of three neurotransmitter systems; serotonin (5-HT), dopamine (DA), y-amino-n-butyric acid (GABA) and the neuropeptide corticotropin-releasing hormone (CRH). Chemicals were...
Streams in the Alsea and Nestucca Sub-Basins were characterized using suites of habitat attributes at the pool and reach scales. These suites were analyzed using a multivariate process with the Multiple Response Permutation Procedure (MRPP) to test for differences in groups. There were differences in the suite of habitat variables...
Seasonally, in 1998 and 1999, I examined spatial and temporal variation in fish assemblages of agricultural, forested, and acid mine drainage tributaries within the Wayne National Forest (WNF) in southern Ohio. Land use and natural disturbance explained patterns in stream fish assemblages. Creek chub and green sunfish were present in...
The coexistence of multiple predators may have important consequences for the structure and function of communities. Interactions between predators may strongly affect their combined direct and indirect effects on prey populations and lower trophic levels. Predators often have size-structured populations, which may result in intraguild predation characterized by complex trophic...
I compared hand sampling, two-pass multiple removal sampling, mark-recapture and catchability-based population estimates for the Pacific giant salamander (Dicamptodon tenebrosus) at 22 sites in 11 streams of Cascade Mountains of Oregon. Mark-recapture and catchability-based population estimates were not significantly different (p 0.86). Hand sampling and two-pass multiple removal population estimates...
The littoral zones of seven reservoirs in the southern Willamette Valley of Oregon were sampled with a boat electroshocker during the summer months of 1995 and 1996. Shoreline substrates were inventoried before sampling sites were randomly selected. Sampling sites consisted of 9 of 12 possible habitat types including four substrate...
Recognizing the importance of native black cottonwood-dominated riparian
forests is especially important to preserve, protect, and manage for biodiversity in
the Willamette River Valley. Species composition, structure, and biomass along a
successional gradient from stand initiation to late succession of black cottonwood
(Populus balsamfera L. subsp. trichocarpa (T. & G.)...
The West Fork Smith River, a 69 km2 watershed in the Coast Range of Oregon, is prone to short periods of very high water temperature in mid-summer due to a combination of human and natural influences. In the summers of 2003 and 2004 more than 400 juvenile coho salmon regularly...
For many species of marine turtle the characteristics that define pelagic habitat have yet to be fully identified. A better understanding of these habitat characteristics is critical to reduce high seas fisheries interactions with turtles, especially as the status of many turtle populations has placed them on the threatened or...
The functioning of marine habitats needs to be understood in the context of the ecological relationships and associations between organisms and the physical and biogenic environment they inhabit. Thus, it becomes important to explore and define habitat features which contribute to these relationships and which are important in the life...
Effective treatment of larval bacterial diseases is a difficult problem when
culturing ornamental fish. Oral administration of antibiotics using existing
microparticle types is not effective due to high leakage rates; furthermore, injection of
larvae is not practical. Treatment is currently limited to use of antibiotic baths, . In this
study,...
The lingcod (Ophiodon elongatus) is an important groundfish species in both recreational and commercial fisheries of the Northeastern Pacific. It is a large, fast-growing, generalist predator of invertebrates and fishes. In response to concerns that lingcod may limit populations of rockfishes (Sebastes spp.), I compared the diets of 375 adult...
Partial migration is a common migratory behavior where some individuals in a population migrate and others do not. Patterns of partial migration can vary dramatically, especially for species that inhabit a wide range of environments. I described and predicted spatial variation in marine migration (anadromy) of female Oncorhynchus mykiss (steelhead...
With increased resource development on the western Arctic coastal plain of Alaska (especially within the oil extraction industry) it is important to understand the basic life history attributes of whitefish stocks in the region in order to ensure appropriate management. These fish are a crucial part of subsistence harvests for...
The migrations upstream of pre-spawned adult steelhead (Oncorhynchus mykiss) and
downstream of post-spawned steelhead (referred to as "kelts") can geographically and
temporally overlap in the Snake River, leading to management challenges for populations
listed under the Endangered Species Act (ESA). This thesis describes the development and
application of a method...
This study was undertaken to determine if strontium chloride could be used to create a trans-generational otolith mark in steelhead (Oncorhynchus mykiss). I completed two strontium injection trials and a survey of juvenile steelhead from various steelhead hatcheries. The two trials measured Sr:Ca ratios in otoliths in response to injections...
In the present study, the potential of low-melting point lipids, namely methyl palmitate (MP) and menhaden stearine (MS), were studied for delivery of water-soluble materials to fish larvae. Addition of the solid emulsifier, sorbitan monopalmitate (SMP) resulted in higher RE compared to the liquid emulsifier sorbitan sesquioleate (SSO). Additions of...
An acceptable microparticulate diet for marine fish larvae may be defined as an artificial diet that contains, retains, and delivers the required nutrients to support survival and growth. Factors affecting ingestion rate of prey items by fish larvae include environmental factors such as light intensity, prey/background contrast, possible chemical cues,...
Most fishes exhibit differences in activity patterns from day to night, with a switch from
high to low activity at dusk and reverse at dawn. Marine reef fishes show similar behavior
among sites, despite dissimilar species assemblages, suggesting that common selection pressures
are leading to convergent behavior. Few studies to...
Invasion by nonnative brook trout (Salvelinus fontinalis) often results in replacement of bull trout (Salvelinus confluentus) in western North America, but the causal mechanisms are not well understood. Removal of brook trout from 1992 to 2000 from Sun Creek in southern Oregon, provided an opportunity to investigate the changes in...
This study examines the spatial and temporal distribution and life history of the "offshore" component of the Northeastern Pacific spiny dogfish (Squalus acanthias) population. Distribution was examined in relation to latitude, depth, the Columbia River plume and large-scale climate changes. Fishery and survey data indicate that the Northeastern Pacific spiny...
Chinook salmon (Oncorhynchus tshawytscha) have been absent from their historic spawning and rearing grounds in the Metolius River Basin in central Oregon since 1968, when fish passage was terminated at the Pelton Round Butte Hydroelectric Project on the Deschutes River. Plans have been developed to reestablish passage of anadromous fish...
Frequent or lengthy predation risk can cause one of two modifications of prey feeding
behavior: 1) postponement of feeding to less risky periods, or 2) resumption of feeding
behavior despite persistent risk. North Pacific flatfishes exhibit both of these responses when confronted with temporal variation in risk, and this experimental...
Sex steroids, follicle stimulating hormone (FSH),
luteinizing hormone (LH) and gonadotropin releasing hormone
(GnRH) were measured in monosex and mixed sex populations of
rainbow trout during early development. Steroids declined
following fertilization, increased at hatch, then fell and
remained constant thereafter. Trends toward differences in
steroids between males and females...
Alternative male phenotypes in salmonine fishes arise from individuals that mature as either larger and older anadromous marine-migrants or as smaller and younger freshwater residents. Variability in age and size of males at maturity is hypothesized to be preceded by early differences in growth in size and lipid storage. Water...
Sympatric steelhead and resident rainbow trout (Oncorhynchus mykiss) are known
to exist in many rivers throughout the Pacific Rim. Whether sympatric steelhead and
resident rainbow trout are polymorphisms within a single gene pool or two reproductively
isolated populations has significant implications concerning the study and conservation of
this polytypic species....
Northern anchovy (Engraulis mordax) are a dominant forage fish in the California Current large marine ecosystem (CCLME). However, little is known about northern anchovy abundance, distribution, age structure, or population fluctuations relative to ocean conditions in the eastern boundary upwelling system off the U.S. West Coast. This thesis includes three...
Aquatic insects that emerge out of streams to mate represent a potential energy
flux to terrestrial food webs. The relative success of an individual aquatic adult insect
is whether it survives long enough to produce offspring, i.e. mate and return to the
stream to oviposit eggs. Some characteristics of the...
The present study investigated the effects of stress and exercise on seawater (SW) adaptation and cortisol dynamics in juvenile steelhead (Oncorhynchus mykiss). To examine the effects of stress, fish acclimated to freshwater (FW) were subjected for 3 hours to confinement stress in FW, and subsequently SW (25 ppt) was introduced...
Pacific lampreys (Lampetra tridentata) have declined in abundance in the Columbia River Basin. Although, the reasons for the decline are unclear, we suggest that development of hydroelectric dams and habitat alterations in tributaries as the main causes. The available knowledge of life history of Pacific lampreys and status from dam...
For the first objective of this thesis, we attempt to understand the role of water flow and directionality in determining steelhead (Oncorhynchus mykiss) and spring/summer and fall Chinook (O. tschawytscha) migration patterns within the Columbia River Estuary and plume by integrating recent advances in biotelemetry and environmental observation and forecasting...
Oregon's only remaining non-reservoir population of adfluvial bull trout (Salvelinus confluentus) is found in Odell Lake, in the headwaters of the Deschutes River. The population size is unknown, but appears to be quite small. Limited spawning and rearing habitats, combined with the effects of introduced species and other anthropogenic changes...
From 1996 through 1998 I collected mature female black rockfish off Oregon and examined ovaries and otoliths to estimate weekly, age-specific larval production. In all reproductive seasons, older black rockfish extruded larvae earlier in the season, followed by progressively younger fish. Each year, beginning in May, I collected young-of-the-year (YOY)...
Environmental factors such as chemical contamination can have immunomodulatory effects on the immune response of fish and may be contributing to the decline in salmonid populations by augmenting disease susceptibility. Xenobiotics can interfere with the immune system at several levels of complexity, and different immune cells and processes have variable...
Wildfire is a largely terrestrial perturbation broadly recognized as an agent of disturbance and ecological change in forested biomes. Effects of post-fire conditions on biotic components of aquatic systems have been less well-documented, although hypothetically, the two are strongly connected. In fact, the influence of wildfire may be most profound...
The Pseudophyllidean tapeworm, Schistocephalus solidus, is a parasite that requires both copepods and fish, mainly the threespine stickleback (Gasterosteus aculeatus) as intermediate hosts, and birds as its final host to complete its life cycle. A rapid increase in the abundance of both the non-native stickleback and the tapeworm in the...
The Tillamook and Kilchis subbasins of the Tillamook Bay watershed (Oregon Coast Range) have differences in geology and land use history and, therefore, varied environmental conditions that could affect fish assemblages. Fifty-two randomly selected wadeable stream reaches in these two subbasins were surveyed for stream habitat and fish assemblage composition...
Recent emphasis on linkages between essential fish habitat and fish stock productivity has raised concerns about the management of fishing activities such as trawling, which have the potential to impact fish habitat. Knowing specifically where and how intensively trawl effort has occurred over time provides ecologists with the necessary background...
Pleuronectid flatfish are generally thought to utilize stereotypical anti-predator behavior to reduce encounters with potential predators, including burial, maintaining a low profile on the bottom, cryptic coloration, and reduced activity. However, a series of laboratory experiments demonstrate significantly different predation rates on juvenile (Age-0) English sole (Parophrys vetulus), northern rock...
Nest counts from the largest subpopulation of the loggerhead sea turtle (Caretta caretta) in the Atlantic, peninsular Florida, have been declining since 1998. Analyzing trends of nests and adult females is insufficient to determine the overall status of a sea turtle population, due to variation in nesting frequency and a...
Effects of spray-dried algae, Schizochytrium sp. and Haematococcus pluvialis, on growth and survival of Manila clam, Tapes philippinarum, spat were determined. Results of the present study showed that these two different spray-dried diets supported clam growth when added as supplements to rations of a mixed diet of the live algae...
From 1998-2000, laboratory studies were conducted to examine factors that impact saltwater-entry behavior and saltwater preference (SWP) of juvenile chinook salmon, Oncorhynchus tshawytscha. These factors included bacterial kidney disease, stress and the presence of trout, O. mykiss. An additional study investigated the orientation of the startle response of chinook salmon...
Because human land use activities often result in increased fragmentation of headwater stream habitats, a better understanding of the effects of fragmentation on the genetic heterogeneity of stream salmonids is useful for effective management. We used eight microsatellites to examine the genetic structure of potamodromous coastal cutthroat trout (Oncorhynchus clarki...
In the Pacific Northwest, regulatory agencies have recently
implemented management strategies for restoration and maintenance of wood
recruitment to streams over time. This allochthonous organic material is a
critical component in the geomorphic and biological structure of forested
streams. Mathematical models are commonly used to evaluate long-term
wood dynamics in...
Fishery dependent data--length distributions, sex ratios, maturity schedules, and species composition of landed catches--are necessary for stock assessments. These data are currently collected by state port biologists using a sampling design that randomly selects samples from a small percentage of a very large target population. Sampling programs may need to...
One of the greatest threats to native bull trout Salvelinus confluentus populations is the presence of non-native brook trout S. fontinalis. This study, conducted in two second-order Eastern Oregon streams, investigates the effect of brook trout on the feeding behavior arid diet of bull trout. Feeding behavior, microhabitat use, and...
In the fall through spring of 2002/03 and 2003/04, the composition of fish and amphibian communities were examined in intermittent streams in the upper Willamette river basin in western Oregon. I recorded standard aquatic habitat variables and water nutrient concentrations (nitrate and phosphate) and correlated them with fish and amphibian...
Longitudinal patterns of fish and benthic invertebrate distribution and
habitat use were similar in Thomas Creek, Oregon but clarity of these patterns
differed. I studied fish and aquatic invertebrates simultaneously, at multiple
scales, and used multivariate statistical techniques to compare responses to the
same environmental conditions. Both types of organisms...
The composition and distribution of fish assemblages was examined in a
floodplain lake system in the Amazon basin. Quantitative samples were
collected during the 1992-1993 flooding season at Marchantaria Island, Solimoes
River. A total of 25,819 specimens representing 8 orders, 30 families, 101
genera and 139 species of fish were...
This study examined fish movements and assemblage dynamics in the Wenaha, Grande Ronde, Snake river system of northeast Oregon and southeast Washington. I investigated the role of fish movement in the dynamics of stream fish assemblages and evaluated relationships between species movement, assemblage structure, and the heterogeneity of habitat at...
Seasonal emergent wetlands in the Pacific Northwest have not been regarded traditionally as fish rearing habitat, despite access to such habitat when river flows overtop riverbanks and connect to the floodplain. As a result, restoration and enhancement projects to remediate for the loss of such wetland habitat are being implemented...
The Middle Fork John Day River is composed of low gradient, alluvial valley
segments separated by constrained, canyon-like reaches, and has a history of multiple
land-uses. These factors can alter the physical and biological structure of streams, and
disrupt the longitudinal river continuum. I examined habitat, fish, macroinvertebrates,
and primary...
The extent to which responses to stress are maladaptive or adaptive to the long-term survival of fish remains to be better understood. The aim of this study was to identify differentially expressed genes in the livers of rainbow trout, Oncorhynchus mykiss, responding to an experimental stressor. Gene expression responses were...
Genetic diversity of two salmonid species, Dolly Varden (Salvelinus malma) and coastal cutthroat trout (Oncorhynchus clarki clarki) in Prince William Sound, Alaska were examined at multiple spatial scales with three molecular markers. Pleistocene glaciers covered what is now Prince William Sound 8,000- 12,000 years ago and both species colonized the...
Understanding how populations within a species interact across various geographic and temporal scales is fundamental to developing appropriate conservation strategies. I examined the geographic variation in genetic and meristic characters of coastal cutthroat trout (Oncorhynchus clarki clarki) based on
approximately 1,400 fish sampled from 54 populations spanning their distributional range...
Identification of critical habitat for all life stages of commercially exploited fish populations is critical for effective management. Despite a clear need for basic biological information on juvenile rockfish life history, there have been very few efforts to describe distribution and habitat of this life stage, particularly along the Oregon...
Tidal wetland channels provide rearing habitat for juvenile Chinook salmon as they emigrate from freshwater habitat and prepare to enter the ocean. Widespread diking and drainage of estuarine marshes for agricultural and urban development may have contributed to a decline in salmon abundance in the Pacific Northwest, prompting efforts to...
Lingcod are an overexploited fish species in the Pacific Northwest and although there has been extensive study of the habitat requirements of adults, particularly during spawning, relatively little is known regarding the habitat requirements of post-settlement juveniles. Many juvenile fish use structural components of habitat to alleviate the risk of...
To best manage Eagle Creek National Fish Hatchery and minimize any negative impacts that the current hatchery program may be having on Endangered Species Act-listed salmonids in the Eagle Creek Basin, I determined if wild fish are being displaced from preferred habitats by hatchery salmonids Oncorhynchus spp. This thesis had...
Anadromous coastal cutthroat trout Oncorhynchus clarkii clarkii may be highly dependent on estuaries, passing through them multiple times during their lifetime. However, few studies have investigated estuarine use by coastal cutthroat trout and it is often thought that estuaries serve primarily as migration corridors rather than rearing areas. We used...
Recent studies of headwater streams have demonstrated their importance to overall watershed biodiversity, nutrient cycling, and energy flux. However, little attention has been paid to long-term effects of forest harvest on macroinvertebrate communities in headwater streams. This study investigated headwater stream macroinvertebrate communities in the H.J. Andrews Experimental Forest, Oregon,...
The goal of this research was to characterize thermal habitat requirements for juvenile redband steelhead trout (Oncorhynchus mykiss gairdneri) in the South Fork John Day River (SFJD), Oregon using physiological indicators of fish condition. Physiological indices of fish condition measured were whole body lipid content and heat shock proteins, specifically...
The goal of this research was to characterize thermal habitat requirements for juvenile redband steelhead trout (Oncorhynchus mykiss gairdneri) in the South Fork John Day River (SFJD), Oregon using physiological indicators of fish condition. Physiological indices of fish condition measured were whole body lipid content and heat shock proteins, specifically...
Discrete coldwater patches within warm streams provide potential thermal refuge for coldwater fishes during periods of heat stress. This analysis focused on heterogeneity in stream water temperatures as influenced by local influx of cooler subsurface waters. Using field thermal probes and recording thermistors, we identified and characterized coldwater patches potentially...
I examined the relative roles of biotic and abiotic factors in structuring redband trout
Oncorhynchus mykiss distributions in the South Fork John Day. I first examined the
relationship between the biological traits of the fish assemblage and riparian-geomorphic features in context of prevailing theories of stream ecology stemming from the...
South Pacific humpback whales were devastated by commercial whaling in their Antarctic feeding areas during the 20th century. Understanding migratory connections and current abundance of these isolated breeding stocks is crucial for the allocation of historical Antarctic catches in population dynamic models used to assess current recovery. However, only a...
Zebrafish, Danio rerio, are widely used as vertebrate research organisms yet little is know about their responses to husbandry stressors. This dissertation examined the whole-body cortisol responses of zebrafish to husbandry stress. Additionally, the effects of stress on the susceptibility to mycobacteriosis and microsporidiosis (Pseudoloma neurophilia) were determined including effects...
I examined hydrological and plant community changes associated with the implementation of a restoration management plan in two riparian meadows located within an agricultural landscape of the central Willamette Valley, Oregon. I established exclosure fencing (a form of passive restoration) in one agricultural field and established fencing and plugged a...
Summer mortality of farmed Pacific oysters causes financial losses for shellfish growers, and selective breeding to improve survival of offspring is a promising way to reduce losses. This dissertation has two objectives to assist the development of tools for use in selective breeding programs.
Objective 1: Identify candidate genes for...
Shellfish growers have expressed interest in developing high-yielding oyster strains through selective breeding. This dissertation has three objectives to help determine the effects of genetic and environmental variation on production traits (body weight, survival, and yield) of Pacific oysters grown in the Pacific Northwest. Objective 1: Determine if relative family...
This thesis provides the first general description of the natural variation in age
structure, growth rates, and survival in headwater populations of coastal cutthroat
trout Oncorhynchus clarkii clarkii from western Oregon, and a subsequent
synthesis of these life-history characteristics across the range of the subspecies.
Age, growth, and survival were...
This study evaluates the functional organization of stream fish assemblages in response to streamflow factors and biotic interactions across a range of spatial scale. The study area for this project includes 109 stream reaches located on tributaries to the upper Missouri River in the northern Great Plains. Fish distribution data...
The distribution of Lahontan cutthroat trout Oncorhynchus clarki henshawi was assessed in a high-desert stream in southeastern Oregon where beaver Castor canadensis are abundant. Longitudinal patterns of beaver ponds, habitat, temperature, and Lahontan cutthroat trout age group distribution were identified throughout Willow Creek. Three distinct stream segments were classified based...
This research was designed to broaden the understanding of how timber-harvest affects aquatic macroinvertebrates in perennial and intermittent headwater streams. This study compared emergent and benthic macroinvertebrate assemblages from 20 headwater streams in the central Oregon Coast Range that varied by harvest condition and flow duration. Through comparison of the...
Questions relating to economic performance, biological conservation and variation in resource abundance and harvest of ocean shrimp have led to increasing pressure for management action. Developing effective management policies for this highly variable resource requires a comprehensive understanding of the fishery and marine processes. Important factors in understanding the fishery...
In the summers of 1998 and 1999, aquatic invertebrate and plant communities were sampled from nineteen springs in the Warner Basin of southeastern Oregon. Across the landscape, these springs exhibited a broad range in water temperature (5-24°C), pH, conductivity, elevation, and gradient. Within a particular spring, water temperature and chemistry...
Although the effects of extrinsic barriers to dispersal have increasingly been shown to
play a large role in the structuring of contemporary genetic diversity, describing the
relationship between landscape structure, stochastic disturbance, and genetic diversity
remains a major challenge. Here, environmental features for 27 barrier-isolated
populations (2,232 individuals) of coastal...
Redband trout (Oncorhynchus mykiss gairdneri) are found over a wide range of environmental conditions and are known for their variability in life history traits among watersheds or even within streams. Life history traits and population structure of these trout can be influenced by a variety of anthropogenic changes including habitat...
Land use alters the physical and biological structure of stream ecosystems and potentially alters their capacity to process nitrogen (N), an essential nutrient that has nearly doubled in abundance on the biosphere
during the past century from human activities. In this dissertation, I quantified uptake and transformation of nitrate (NO₃⁻)...
This study was an investigation of lotic macroinvertebrate distribution in northeastern Oregon at two different spatial and biological scales. Examination of assemblages at a limited spatial scale revealed relationships with natural and disturbance gradients and led to questions about distribution of a population at broader spatial scales. In a 16...
Hatcheries whose purpose is to provide for a recreational fishery must minimize impacts on wild fishes. Management to reduce hatchery and wild interactions is especially important on river systems that contain Endangered Species Act (ESA) listed species. I examined adult hatchery summer steelhead, Oncorhynchus mykiss, behavior, current management and a...
Processes of metamorphosis, settlement, and growth were examined in Pacific sanddab
using field studies and otolith microstructure. This flatfish transforms at large sizes, has a
gradual metamorphosis, and settles to a nursery on the middle continental shelf. Eye migration
takes 3 months and "metamorphosis proper" which begins after completion of...
Biological invasions are the second largest threat to biodiversity following habitat loss, and studying invasions has been a focus of ecological the past two decades. Despite the intense research, many basic questions remain empirically unanswered, particularly in the realm of behavior. The purpose of this research was to explore the...
Salmonids in arid high-elevation streams find themselves at the fringe of their tolerance range. Under the conditions they endure in such environments, long-distance migratory movements among widely dispersed habitats may be an important mechanism for some fish to persist, and even thrive. The Donner und Blitzen (Blitzen) River redband trout...
The myxozoan parasite, Ceratomyxa shasta, is the most significant pathogen of juvenile Chinook salmon (Oncorhynchus tshawytscha) in the Klamath River, CA, USA. This parasite requires two hosts - a freshwater polychaete (Manayunkia speciosa) and a salmonid - to complete its life cycle. The complex life cycle and large geographic area...
We monitored larval Lost River and shortnose suckers from natal beds in the Williamson and Sprague rivers to nursery grounds in Upper Klamath Lake. Downstream movements occurred at night, in the middle of the channel, and on the falling limb of the hydrograph. Ages, sizes, and developmental stages of larvae...
Chinook salmon (Oncorhynchus tshawytscha) display the greatest variability of return times to freshwater of all Pacific salmon. Differential return times to freshwater have segregated populations of Chinook into two broad types or runs, fall and spring, named for the time of year in which they migrate to freshwater. Migration time...