The West Fork Smith River, a 69 km2 watershed in the Coast Range of Oregon, is prone to short periods of very high water temperature in mid-summer due to a combination of human and natural influences. In the summers of 2003 and 2004 more than 400 juvenile coho salmon regularly...
This research was designed to broaden the understanding of how timber-harvest affects aquatic macroinvertebrates in perennial and intermittent headwater streams. This study compared emergent and benthic macroinvertebrate assemblages from 20 headwater streams in the central Oregon Coast Range that varied by harvest condition and flow duration. Through comparison of the...
Previous research in South Fork Hinkle Creek suggested that coastal cutthroat trout exhibit an aggregated spatial pattern across multiple spatial scales. To evaluate the persistence of the observed abundance patterns and identify factors that affect those patterns, half-duplex passive integrated transponders (PIT-tags) were implanted in 320 coastal cutthroat trout (>...
For the first objective of this thesis, we attempt to understand the role of water flow and directionality in determining steelhead (Oncorhynchus mykiss) and spring/summer and fall Chinook (O. tschawytscha) migration patterns within the Columbia River Estuary and plume by integrating recent advances in biotelemetry and environmental observation and forecasting...
Recent studies of headwater streams have demonstrated their importance to overall watershed biodiversity, nutrient cycling, and energy flux. However, little attention has been paid to long-term effects of forest harvest on macroinvertebrate communities in headwater streams. This study investigated headwater stream macroinvertebrate communities in the H.J. Andrews Experimental Forest, Oregon,...
Radiotelemetry was used to study the seasonal movements and habitat use of adult westslope cutthroat trout Oncorhynchus clarki lewisi in Roberts
Creek and Rail Creek, headwater tributaries of the John Day River, Oregon,
from September 2000 to December 2001. The objectives were to (1)
describe adult cutthroat trout life history...
Rotifers and brine shrimp (Artemia) are important prey items for rearing marine fish larvae. Their availability in the water column may be reduced when they are transferred to larval rearing tanks at lower temperature. In this study, Brachionus rotundiformis (SS-type) and Brachionus plicatilis (L-type) were semi-continuously cultured and fed on...
An acceptable microparticulate diet for marine fish larvae may be defined as an artificial diet that contains, retains, and delivers the required nutrients to support survival and growth. Factors affecting ingestion rate of prey items by fish larvae include environmental factors such as light intensity, prey/background contrast, possible chemical cues,...
Pacific rockfishes (genus Sebastes) have attracted wide scientific and public interest from an evolutionary, fishery and conservation standpoints. This dissertation addresses several hypotheses involving spatial and temporal scales of genetic change in two overfished rockfishes, darkblotched (S. crameri) and canary rockfish (S. pinniger), using statistical analyses of genetic variation within...
Salmonid run sizes are strongly affected by their early marine stage. Fully understanding the life history of salmonids means understanding how they interact with their marine environment and with other fishes. Changes in the biological and physical environment off the Columbia River region affects the distribution and abundance of predatory...
The goal of this research was to characterize thermal habitat requirements for juvenile redband steelhead trout (Oncorhynchus mykiss gairdneri) in the South Fork John Day River (SFJD), Oregon using physiological indicators of fish condition. Physiological indices of fish condition measured were whole body lipid content and heat shock proteins, specifically...
The goal of this research was to characterize thermal habitat requirements for juvenile redband steelhead trout (Oncorhynchus mykiss gairdneri) in the South Fork John Day River (SFJD), Oregon using physiological indicators of fish condition. Physiological indices of fish condition measured were whole body lipid content and heat shock proteins, specifically...
Chinook salmon (Oncorhynchus tshawytscha) display the greatest variability of return times to freshwater of all Pacific salmon. Differential return times to freshwater have segregated populations of Chinook into two broad types or runs, fall and spring, named for the time of year in which they migrate to freshwater. Migration time...
The Northern California Current (NCC) ecosystem exhibits extreme seasonal, interannual and interdecadal shifts in the abiotic environment and shifts in primary and higher production. This variability is also apparent in the spatial structure of the ecosystem with nearshore-shelf waters (<150 m isobath) being highly productive and having a different community...
Riparian areas are eco-tones where aquatically- and terrestrially-derived insect biomass is exchanged between habitats, presenting consumers with new sources of energy, and resulting in a reciprocal subsidy. The relative contribution of energy exchange and the
resulting impacts on vertebrate riparian consumers, such as fish or birds, remains poorly understood. We...
Lahontan cutthroat trout (LCT) (Oncorhynchus clarki henshawi) are currently limited in their distribution to a patchwork of small isolated populations, the result of habitat degradation and natural variation in landscape and in-stream conditions. The objectives of this study were to determine how landscape level topographic features influence LCT distribution patterns....
Recently, there has been concern over the decline of the Pacific lamprey, Lampetra tridentata, in the northwestern United States. However, effective management has been impeded by data gaps in basic biology, especially in the early life stages. Consequently, in 2004 and 2005 I examined reproductive ecology, larval recruitment, and lamprey...
Larval transport and retention of two endangered suckers were studied in a highly
altered lacustrine/riverine complex. The endangered populations of Lost River sucker,
Deltistes luxatus, and shortnose sucker, Chasmistes brevirostris, in Upper Klamath Lake
(UKL), Oregon are the largest remnant populations of these suckers. Downstream of
UKL, the Keno Impoundment...
The extent to which responses to stress are maladaptive or adaptive to the long-term survival of fish remains to be better understood. The aim of this study was to identify differentially expressed genes in the livers of rainbow trout, Oncorhynchus mykiss, responding to an experimental stressor. Gene expression responses were...
Understanding seasonal changes in growth, survival, and movement rates is
crucial to salmonid management. These life history characteristics provide a context for
evaluation of management actions. We evaluated the life history of individually
marked Oncorhynchus mykiss gairdneri in the South Fork John Day River basin in
Northeastern Oregon. This thesis...