This is an integrated assessment across terrestrial, freshwater, and coastal marine realms. It includes the coast range of Oregon and Washington as well as Vancouver Island in British Columbia. The marine portion only includes the coastline and shallow subtidal; the next iteration will include the offshore component.
Hydrological optics has a rich history, playing a significant role in physical, chemical, and biological oceanography. The success over the last 30 years has provided oceanographers with a non-invasive means to study regional and global scale physical, chemical, and biological processes (Figure 1). The ability to map the color of...
Data from three micronetworks with eddy correlation data and three additional micronetworks without eddy correlation data are analyzed to study the spatial variability of surface air temperature in complex terrain. A simple similarity relationship is constructed to relate the spatial variation of air temperature along the slope to the thermal...
The Holocene portion of the Siple Dome (Antarctica) ice core was
dated by interpreting the electrical, visual and chemical properties of the
were interpreted manually and with a computer algorithm.The algorithm
was adjusted to be consistent with atmospheric methane stratigraphic
(Greenland Ice Sheet Project 2) ice core, ¹⁰Be stratigraphic ties...
Influenza A incidence peaks during winter in temperate regions. The basis for this pronounced seasonality is not understood, nor is it well documented how influenza A transmission principally occurs. Previous studies indicate that relative humidity (RH) affects both influenza virus transmission (IVT) and influenza virus survival (IVS). Here, we reanalyze...
Climate regime shifts force fish communities through rapid transitions between alternate species assemblages, but little is known about the role that biochemical ecology plays in these transitions. We document a biochemical effect of climate-induced community transitions in boreal oceans: opposite population trajectories of lipid-rich and lipid-poor fish species. We compared...
Fluctuations of the low frequency sound field in the presence of an internal solitary wave packet during the Shallow Water ’06 experiment are analyzed. Acoustic, environmental, and on-board ship radar image data were collected simultaneously before, during, and after a strong internal solitary wave packet passed through the acoustic track....
Preliminary results are presented from an analysis of mid-frequency acoustic transmission data collected at range 550m during the Shallow Water 2006 Experiment. The acoustic data were collected on a vertical array immediately before, during, and after the passage of a nonlinear internal wave on 18 August, 2006. Using oceanographic data...
Chemical and biological sensor technologies have advanced rapidly in the past five years. Sensors that require low power and operate for multiple years are now available for oxygen, nitrate, and a variety of bio-optional properties that serve as proxies for important components of the carbon cycle (e.g., particulate organic carbon)....
The forces exerted on light-frame wood buildings as a result of surge and waves are not fully understood. With a better understanding of these types of forces, it may eventually be possible to build coastal structures to better withstand the loads. In this paper, a recent two part experimental study...
Objectives:
To evaluate the impact of the ring nematode, Mesocriconema xenoplax on the physiology and productivity of phylloxera-resistant grape rootstocks as a basis for recommending rootstocks in the Pacific Northwest. Specific objectives for 2006:
Spring: Inoculate soil with AMF and M. xenoplax. Plant vines.
Growing season: Monitor plant growth, gas...
Objectives of Proposed Research:
The goals of this project for the next few years are: 1) to develop optimal tissue nutrient levels for N, P, and K in winegrapes that are based on physiological performance and fruit quality, 2) to identify the best tissue (leaf vs. petiole) and time of...
The objectives of this research are to monitor tannin and anthocyanin changes during berry development and over several growing seasons to understand how the vintage effects wine composition. Specifically, the objectives of this research project are :
· Determine the effect of berry development on the composition of phenolics (tannins...
The objectives of this research project are to understand tannin and anthocyanin changes during berry development in Pinot noir fruit and wines. Specifically, the objectives of this research project are:
· Determine the effect of berry development on the composition of tannins in cv. Pinot noir berries
· Determine the...
The report below and displays in the lobby summarize the first-year activities of the Oregon Vineyard Soil and Nutrition Initiative. This work has laid the foundations for OVID, the Oregon Vineyard Database, which will fill the second year of OVSNI and is discussed in the final sections.
The sensory evaluation of the 2000 vintage Pinot noir wines from the Oregon State University viticulture trials at Benton Lane Vineyard was conducted by a panel of 11 semi-trained panelists using a modified version of free-choice profiling. 36 wines were made from 3 replications of the 12 field treatments. For...
The objectives of this study are to evaluate the effects of manipulating soil moisture and nitrogen availability using different approaches, including supplemental irrigation, nitrogen addition to the soil or to the leaves, and the elimination of competition for water and nutrients between the ground cover and the grapevines by tilling....
An approximation of the total yeast fermentable nitrogen content in juice or must is taken as the sum of the nitrogen available from ammonia and the alpha-amino acids present (Bisson 1991 ; Dukes and Butzke 1998 ; Jiranek, Langridge, and Henshcke 1995). Recommended levels of fermentable nitrogen needed by yeast...
This study integrates various vineyard practices that may improve nitrogen availability to the vine, particularly during ripening . Different strategies aimed at improving fermentation behavior and wine quality are being evaluated. This study aims to optimize fruit quality and maximize the juice nitrogen fraction that can be used by yeast...
This study integrates various vineyard practices that may improve nitrogen availability to the vine, particularly during ripening. Different strategies aimed at improving fermentation behavior and wine quality are being evaluated. This study aims to optimize fruit quality and maximize the juice nitrogen fraction that can be used by yeast during...
Objectives of proposed research:
1. Investigate the relationship between abscisic acid (ABA) and auxins and the regulation of carbon partitioning.
2. Investigate the origin of ABA present in the fruit during ripening and attempt to modify the partitioning pattern through manipulation of endogenous ABA levels using mefluidide (ABA biosynthesis promoter)...
Objectives of Research :
1) Construct a whole-vine dry matter and mineral allocation budget for mature grapevines grown in Jory (basaltic parent material) soil.
2) Determine the associated seasonal dynamics of plant-available soil minerals.
3) Model the timing of uptake and allocation of mineral nutrients in different vine tissues.
The Willamette valley has grown to be an important source of high quality grapes for the production of wine. These grapes are a very high value crop that has proven to be profitable in this region. Irrigation of this crop has been limited largely to the establishment stage, with most...
Vineyard managers must decide on the timing and amount of irrigation. In Oregon the need for irrigation differs greatly year to year and field to field based on micro climate, soil, root development, plant health, and root stock. We suggest the use of leaf water potential as a useful management...
Objective(s) of Proposed Research or Outreach Project:
1. Investigate cover crop management in commercial vineyards on aroma and aroma precursor composition in grapes.
2. Investigate cover crop management in commercial vineyards on flavor quality of wine.
3. Investigate the feasibility to use aroma and aroma precursor analysis in grapes as...
The objectives of this study are to determine:
· How vine vigor and fruit composition vary in different alleyway management regimes: solid vegetative cover vs. every other alleyway of vegetative cover removed
· What differences are observed in different alleyway management regimes within a vineyard
· What differences are observed...
The objectives of this study are to determine:
• How the time of leaf pulling affects Pinot noir fruit quality and composition
• How the intensity of leaf pulling affects Pinot noir fruit quality and composition
• If there is a difference in fruit quality and composition when lateral leafs...
Competition between ‘Pinot noir’ grapevines and alleyway cover crops
was evaluated in two commercial vineyards in western Oregon. Seven
cover crop treatments including a clean-cultivated control were applied
in the fall of 2003 and their impact on vines was monitored in 2004
and 2005. Competition with grapevines was assessed by...
We conducted a 3-year study of helminth parasites to assess their effect on the lesser prairie-chicken Tympanuchus pallidicinctus. Helminth parasites were found in most of the examined wild prairie chicken carcasses: 95% had eye worm Oxyspirura petrowi, 92% had stomach worm Tetrameres sp., and 59% had caecal worm Subulura sp....
The ability to ascertain gender and age of juvenile grouse is essential for determining gender-specific population age structure and studying timing of reproductive events, respectively. We examined outer rectrix feathers from juvenile Lesser Prairie-Chickens (Tympanuchus pallidicinctus) captured at 30–40 and 50–60 days post-hatching. Blood samples were collected from most chicks...
We used mark-recapture methods to estimate age-specific apparent survival rates for male Lesser Prairie-Chickens (Tympanuchus pallidicinctus), a gamebird of conservation concern. A total of 311 male prairie-chickens (135 yearlings, 176 adults) were captured and banded during a 5-year study in southwest Kansas. Time-since-marking models were used to estimate apparent survival...
Invertebrates are an important food source for grouse chicks, especially within the first 2 weeks of life. Invertebrate abundance is highly patchy and dependent upon herbaceous cover and vegetation structure. We examined the relationship between invertebrate biomass (from sweepnet samples) and habitat structure at lesser prairie-chicken (Tympanuchus pallidicinctus) brood-use and...
We conducted this 2-year study to determine if lesser prairie-chickens Tympanuchus pallidicinctus and ring-necked pheasants Phasianus colchicus used the same habitats where their ranges overlapped in southwestern Kansas. Telemetry locations of 50 transmitter-equipped lesser prairie-chickens and 28 pheasants were used to monitor habitat use by the two species. Additionally, vegetation...
The distribution and range of the greater sage-grouse Centrocercus urophasianus have been reduced by 56% since the European settlement of western North America. Although there is an unprecedented effort to conserve the species, there is still considerable debate about the vegetation composition and structure required for nesting and brood-rearing habitat....
Mortality due to infectious diseases is seldom reported in the Greater Sage-Grouse (Centrocercus urophasianus). A case of necrotic enteritis associated with Clostridium perfringens type A is described in a free-ranging adult male sage-grouse in eastern Oregon. Clostridial enteritis is known to cause outbreaks of mortality in various domestic and wild...
This study quantifies the short-term effects of low-, moderate-, and high-severity fire on carbon pools and fluxes in the Eastern Cascades of Oregon. We surveyed 64 forest stands across four fires that burned 41,000 ha (35%) of the Metolius Watershed in 2002 and 2003, stratifying the landscape by burn severity...
This is an exhibit made by the Oregon Department of Fish and Wildlife to the Oregon Fish and Wildlife Commission for the November 17, 2000 meeting. Topics covered include: proposals to add Daphnia (Daphnia spp., a small crustacean in the Klamath Lake area) and flat abalone (Haliotis walallensis) to the...
In this paper, we describe a fusion approach to finding opinion about a given target in blog postings. We tackled the opinion blog retrieval task by breaking it down to two sequential subtasks: on- topic retrieval followed by opinion classification. Our opinion retrieval approach was to first apply traditional IR...
Analytical methods capable of trace measurement of semi-volatile organic
compounds (SOCs) are necessary to assess the exposure of tadpoles to contaminants as a
result of long-range and regional atmospheric transport and deposition. The following
study compares the results of two analytical methods, one using pressurized liquid
extraction (PLE) and the...
Atmospheric measurements of semivolatile organic compounds (SOCs) were made at Mt. Bachelor Observatory (MBO), located in Oregon’s Cascade Range, to understand the trans-Pacific and regional transport of SOCs from urban areas. High volume air sampling (~644 m³ for 24 hour periods) of both the gas and particulate phases was conducted...
The synthesis of isoindazoles bearing α-ketoester and α-hydroxyester groups via the coarctate cyclization of ester terminated azo-ene-yne precursors is described. Whereas previous studies on isoindazole formation have shown the reaction to proceed through a kinetic coarctate pathway, functionalization of the terminal acetylene with a methyl ester sufficiently stabilizes the carbene...
Historic and current use pesticides (HUPs and CUPs), with respect to use in the United States and Canada, were identified in trans-Pacific and regional air masses at Mt. Bachelor Observatory (MBO), a remote high elevation mountain in Oregon’s Cascade Range located in the United States, during the sampling period of...
Concentrations of polybrominated diphenyl ethers (PBDEs),
pesticides, polychlorinated biphenyls (PCBs), and polycyclic
aromatic hydrocarbons were measured in 136 fish from 14 remote
lakes in 8 western U.S. National Parks/Preserves between
2003 and 2005 and compared to human and wildlife contaminant
health thresholds. A sensitive (median detection limit, -18
pg/g wet...
Primula sect. Parryi comprises five species endemic to western North America: P. parryi, P. angustifolia, P. rusbyi, P. capillaris, and P. cusickiana with four varieties. This section, derived from a clade with representatives in Asia and Europe, exemplifies a phytogeographic pattern in which a widespread species is accompanied by multiple...
Air-sea interaction at ocean fronts and eddies exhibits positive correlation between sea surface temperature (SST), wind speed, and heat fluxes out of the ocean, indicating that the ocean is forcing the atmosphere. This contrasts with larger scale climate modes where the negative correlations suggest that the atmosphere is driving the...
In order to better understand the general problem of satellite cloud top height retrievals for low clouds, observations made by NOAA research vessels in the stratocumulus region in the southeastern Pacific during cruises in 2001 and 2003 to 2006 were matched with near-coincident retrievals from the Moderate Resolution Imaging Spectroradiometer...
An upscaled elliptic-parabolic system of partial differential equations
describing the multiscale flow of a single-phase incompressible fluid and
transport of a dissolved chemical by advection and diffusion through a heterogeneous
porous medium is developed without the usual assumptions of scale
separation. After a review of homogenization results for the traditional...
The focus of postcolonial studies has shifted in the last decade or so from a struggle over history, the narratives of winners and losers—as recorded by the winners and resisted by the losers—to a struggle over geography. Power inequities formerly embodied in Manichean conceptualizations (Colonizer/Colonized, Oppressor/Oppressed, Occidental/Oriental, Self/Other, First World/Third...
Ceratomyxa shasta is a myxozoan parasite identified as a contributor to salmon mortality in the Klamath River, USA. The parasite has a complex life cycle involving a freshwater polychaete, Manayunkia speciosa and a salmonid. As part of ongoing research on how environmental parameters influence parasite establishment and replication, we designed...
Pressurized liquid extraction (PLE) was evaluated as a method for extracting semivolatile organic compounds (SOCs) from air sampling media; including quartz fiber filter (QFF), polyurethane foam (PUF), and a polystyrene divinyl benzene copolymer (XAD-2). Hansen solubility parameter plots were used to aid in the PLE solvent selection in order to...
Dynein light chain LC8 is a small, dimeric, and very highly conserved globular protein that is an integral part of the dynein and myosin molecular motors but appears to have a broader role in multiple protein complexes unrelated to molecular motors. LC8 binds to two families of targets: those having...
Chromosomal rearrangements may complicate construction of Arabidopsis with multiple TDNA-insertion mutations. Here, crossing two lines homozygous for insertions in AtREV3 and AtPOLH (chromosomes I and V, respectively) and selfing F1 plants yielded non-Mendelian F2 genotype distributions: frequencies of +/++/+ and 1/1 2/2 progeny were only 0.42 and 0.25%. However, the...
Field trials in four distinct agricultural soils were conducted to examine changes to total recoverable and labile soil Cd and Ni concentrations with applications of commercial phosphate fertilizers. The edible portion of wheat and potato crops grown at the field plots were analyzed for recoverable Cd and Ni. Total recoverable...
Cadmium is a common impurity in phosphatic fertilizers and may contribute to soil Cd accumulation. Changes in total and bioavailable Cd burdens to agricultural soils and the potential for plant Cd accumulation resulting from fertilizer input was investigated. Three year field studies were conducted using three dose levels of cadmium-rich,...
Plant growth stages are identified as distinct morphological landmarks in a continuous developmental process. The terms
describing these developmental stages record the morphological appearance of the plant at a specific point in its life cycle. The
widely differing morphology of plant species consequently gave rise to heterogeneous vocabularies describing growth...
Although literacy programs in North African countries vary in method, management approach, and in content emphasis, their discourse is strikingly similar: It focuses too often on learners' deficits and considers the condition of these “illiterate” subjects, i.e. persons lacking the 3Rs, as a “disease” against which a war of eradication...
Formal description of plant phenotypes and standardized annotation of gene expression and protein localization data require
uniform terminology that accurately describes plant anatomy and morphology. This facilitates cross species comparative
studies and quantitative comparison of phenotypes and expression patterns. A major drawback is variable terminology that is
used to describe...
Rice, maize, sorghum, wheat, barley and the other
major crop grasses from the family Poaceae
(Gramineae) are mankind’s most important source
of calories and contribute tens of billions of dollars
annually to the world economy (FAO 1999, http://www.fao.org; USDA 1997, http://www.usda.gov).
Continued improvement of Poaceae crops is necessary
in order...
Many industrially important reactions use immobilized enzymes in non-aqueous, organic
systems, particularly for the production of chiral compounds such as pharmaceutical precursors.
The addition of a spacer molecule (“tether”) between a supporting surface and enzyme often
substantially improves the activity and stability of enzymes in aqueous solution. Most “long”
linkers...
Pretreatment of male C57BL/6 mice with low doses of the persistent organochlorine
(OC) pesticide, chlordecone (CD), stimulated biliary excretion of exogenous CH up to 3-fold. Increased biliary excretion occurred without changes in hepatic ATP-binding
cassette transporter G8 (ABCG8) of the bile canaliculus or scavenger receptor class B
type I (SR-BI)...