We developed a multiple linear regression model to
robustly determine aragonite saturation state (Ωarag) from
observations of temperature and oxygen (R² = 0.987, RMS
error 0.053), using data collected in the Pacific Northwest
region in late May 2007. The seasonal evolution of Ωarag near
central Oregon was evaluated by applying...
The fauna of parasitic isopods of the family Bopyridae in Singapore is only poorly known, consisting of only seven species in as many genera in five subfamilies. A new small collection adds four species in as many genera, two of them belonging to a subfamily not previously recorded from Singapore....
Integrated Ocean Drilling Program (IODP) Expedition 316 Sites C0006 and C0007 examined the
deformation front of the Nankai accretionary prism offshore the Kii Peninsula, Japan. In the drilling area,
the frontal thrust shows unusual behavior as compared to other regions of the Nankai Trough. Drilling
results, integrated with observations from...
Empirical evidence indicates that environmental fluctuations have important effects on fisheries production. However, existing analytical solutions of stochastic fisheries models have been produced only under highly simplified economic and biological conditions. The main contribution of this paper is to derive under general conditions a policy function for the management of...
Background: Short RNAs, and in particular microRNAs, are important regulators of gene
expression both within defined regulatory pathways and at the epigenetic scale. We investigated
the short RNA (sRNA) population (18-24 nt) of the transcriptome of green leaves from the
sequenced Populus trichocarpa using a concatenation strategy in combination with...
A melt pond model is presented that predicts pond size and depth changes, given an
initial ice thickness field and representative surface fluxes. The model is based on the
assumption that as sea ice melts, fresh water builds up in the ice pore space and eventually
saturates the ice. Under...
Davidson Seamount, a volcano located about 80 km off the central California coast, has a volume of
~320 km³ and consists of a series of parallel ridges serrated with steep cones. Davidson was sampled and
its morphology observed during 27 ROV Tiburon dives. During those dives, 286 samples of lava,...
Since 1958 when Alfred C. Redfield (1) recognized the similarity between the ratios of elements in living biomass and those dissolved in the surrounding seawater, we have understood that microorganisms largely control the concentrations, distribution, and molecular makeup of nutritional resources in the ocean. The primary elemental ingredients for life,...
Recent natural disasters around the world including
both tsunamis and hurricanes, have highlighted the inability
of wood buildings to withstand wave and surge
loading during these extreme events. Little is known
about the interaction between coastal residential light-frame
wood buildings and wave and surge loading because
often little is left...
This study quantifies the short-term effects of low-, moderate-, and high-severity fire on carbon pools and fluxes in the Eastern Cascades of Oregon. We surveyed 64 forest stands across four fires that burned 41,000 ha (35%) of the Metolius Watershed in 2002 and 2003, stratifying the landscape by burn severity...
Pretreatment of male C57BL/6 mice with low doses of the persistent organochlorine
(OC) pesticide, chlordecone (CD), stimulated biliary excretion of exogenous CH up to 3-fold. Increased biliary excretion occurred without changes in hepatic ATP-binding
cassette transporter G8 (ABCG8) of the bile canaliculus or scavenger receptor class B
type I (SR-BI)...
Abstract:
Purpose – The purpose of this paper is to investigate librarians' attitudes towards instruction in virtual reference transactions and to review relevant literature.
Design/methodology/approach – Librarians who provide virtual reference services are surveyed about attitudes towards providing instruction via virtual reference software. In addition to gathering demographic information respondents...
Tsunami force and pressure distributions on a rigid
wall fronted by a small seawall were determined experimentally
in a large-scale wave flume. Six different
seawall heights were examined, two of which were exposed
to a range of solitary wave heights. The same
experiment was done without a seawall for comparison....
A definition is suggested for affine symmetry tensors, which generalize the notion of affine vectors in the same way that (conformal) Killing tensors generalize (conformal) Killing vectors. An identity for these tensors is proven, which gives the second derivative of the tensor in terms of the curvature tensor, generalizing a...
Measurements of suspended sediment concentration, velocity, salinity, and turbulent
microscale shear in the near-field region of the Columbia River plume are used to investigate
the mechanisms of sediment resuspension and entrainment into the plume. An east-west
transect was occupied during spring and neap tide periods in August 2005 and May...
The eastern South Pacific (ESP) oxygen minimum zone (OMZ) is a permanent hydrographic feature located directly off the coasts of northern Chile and Peru. The ESP OMZ reaches from coastal waters out to thousands of kilometers offshore, and can extend from the near surface to depths greater than 700 m....
One of the biggest advantages of remote sensing is that large areas of the earth's surface can be surveyed in short periods of time, providing nearsynoptic "pictures." Repeated surveys of one area, like time-lapse photography, can be interpreted as a movie to illustrate the dynamics of detectable features. These attributes...
There is increasing evidence that aging is affected by biological (circadian) clocks – the internal mechanisms that coordinate daily changes in gene expression, physiological functions and behavior with external day/night cycles. Recent data suggest that disruption of the mammalian circadian clock results in accelerated aging and increased age‐related pathologies such...
The Gene Ontology (GO) Consortium (http://www.geneontology.org) (GOC) continues to develop,
maintain and use a set of structured, controlled
vocabularies for the annotation of genes, gene
products and sequences. The GO ontologies
are expanding both in content and in structure.
Several new relationship types have been introduced
and used, along with...
We analyzed 7 years (2002–2008) of micrometeorological and concurrent biological
observations of carbon and water fluxes at a mature ponderosa pine forest in central
Oregon in a semiarid climate. We sought to evaluate the extent that gross primary
productivity, net ecosystem exchange, ecosystem respiration, net primary productivity, net
ecosystem productivity,...
Recent work by S. Lentz et al. documents offshore transport in the inner shelf due to a wave-driven return
flow associated with the Hasselmann wave stress (the Stokes–Coriolis force). This analysis is extended using
observations from the central Oregon coast to identify the wave-driven return flow present and quantify the...
Observations, primarily from satellites, have shown a statistical relationship between the surface wind stress and underlying sea surface temperature (SST) on intermediate space and time scales, in many regions inclusive of eastern boundary upwelling current systems. In this paper, this empirical SST–wind stress relationship is utilized to provide a simple...
Successfully shifting to a more piscivorous diet may be an important factor in the growth and survival of juvenile coho salmon Oncorhynchus kisutch and Chinook salmon O. tshawytscha during their first summer in the northern California Current. Nonmetric multidimensional scaling and cluster analysis of diets by size showed several distinct...
We assimilate localized mass anomalies inferred from
GRACE ranging measurements into a hydrodynamic model
to improve tidal solutions around Antarctica for the M2, S2,
and O1 constituents. The variational approach used accounts
for the spatial averaging of tidal elevations implicit in the
mass anomaly parametrization used for the GRACE tidal...
What is the uncertainty of climate-carbon cycle projections in response to anthropogenic greenhouse gas emissions and how can we reduce this uncertainty? We address this question by quantifying the ability of available ocean tracer observations to constrain the values of diapycnal diffusivity in the pelagic ocean (Kv), a key uncertain...
Small RNAs, including microRNAs (miRNAs), small interfering RNAs
(siRNAs), and trans-acting siRNAs (tasiRNAs), control gene expression
and epigenetic regulation. Although the roles of miRNAs and
siRNAs have been extensively studied, their expression diversity
and evolution in closely related species and interspecific hybrids
are poorly understood. Here, we show comprehensive analyses...
Surface tensions of high-salinity solutions are significantly different from those of pure water. Our objective was to develop and test a methodology to determine whether these surface tension effects predictably alter imbibition into dry and moist porous media. Static and dynamic experiments were performed using four grades of quartz sand...
We report measurements of the structural, optical, transport, and magnetic properties of single crystals of the
anisotropic p-type transparent semiconductor CuAlO₂. The indirect and direct band gaps are 2.97 and 3.47 eV,
respectively. Temperature-dependent Hall measurements yield a positive Hall coefficient in the measured range
and an activated carrier temperature...
Monitoring the sources and fate of freshwater in the
East Greenland Current (EGC) is important, as this water
has the potential to suppress deep convection in the Nordic
and Labrador Seas if the outflow of freshwater from the
Arctic Ocean increases in response to climate change. Here,
hydrographic, oxygen isotope...
This work compares the Weather Research and Forecasting (WRF) and Hadley Centre Regional Model (HadRM) simulations with the observed daily maximum and minimum temperature (Tmax and Tmin) and precipitation at Historical Climatology Network (HCN) stations over the U.S. Pacific Northwest for 2003–07. The WRF and HadRM runs were driven by...
Analytical methods capable of trace measurement of semi-volatile organic
compounds (SOCs) are necessary to assess the exposure of tadpoles to contaminants as a
result of long-range and regional atmospheric transport and deposition. The following
study compares the results of two analytical methods, one using pressurized liquid
extraction (PLE) and the...
A reexamination of turbulence dissipation measurements from the equatorial Pacific shows that the turbulence diffusivities are not a simple function of the gradient Richardson number. A widely used mixing scheme, the K-profile parameterization, overpredicts the turbulent vertical heat flux by roughly a factor of 4 in the stably stratified region...
Field trials in four distinct agricultural soils were conducted to examine changes to total recoverable and labile soil Cd and Ni concentrations with applications of commercial phosphate fertilizers. The edible portion of wheat and potato crops grown at the field plots were analyzed for recoverable Cd and Ni. Total recoverable...
Apex predators have experienced catastrophic declines throughout the world as a result of human persecution and habitat loss. These collapses in
top predator populations are commonly associated with dramatic increases in the abundance of smaller predators. Known as “mesopredator release,”
this trophic interaction has been recorded across a range of...
Tanoak (Lithocarpus densiflorus (Hook. and Arn.) Rehder) is highly susceptible to sudden oak death, a disease caused by the oomycete Phytophthora ramorum Werres, De Cock & Man in’t Veld. Symptoms include a dying crown, bleeding cankers, and, eventually, death of infected trees. The cause of mortality is not well understood,...
To directly determine mortality and predation in the endangered western Steller sea lion Eumetopias jubatus, we deployed implanted, satellite-linked post-mortem data transmitters in 21 juveniles. Data recovered from 4 of 5 detected mortalities exhibited precipitous drops in ambient temperatures followed by immediate onset of transmissions (N = 3), or gradual...
Cadmium is a common impurity in phosphatic fertilizers and may contribute to soil Cd accumulation. Changes in total and bioavailable Cd burdens to agricultural soils and the potential for plant Cd accumulation resulting from fertilizer input was investigated. Three year field studies were conducted using three dose levels of cadmium-rich,...
A depth-dependent boundary layer lapse rate was empirically deduced from 156 radiosondes released during six month-long research cruises to the southeast Pacific sampling a variety of stratocumulus conditions. The lapse-rate dependence on boundary layer height is weak, decreasing from a best fit of 7.6 to 7.2 K km⁻¹ as the...
Providing intelligent algorithms to manage the ever-increasing flow of air traffic is critical to the efficiency and economic viability of air transportation systems. Yet, current automated solutions leave existing human controllers “out of the loop" rendering the potential solutions both technically dangerous (e.g., inability to react to suddenly developing conditions)...
Fluctuations of the low frequency sound field in the presence of an internal solitary wave packet during the Shallow Water ’06 experiment are analyzed. Acoustic, environmental, and on-board ship radar image data were collected simultaneously before, during, and after a strong internal solitary wave packet passed through the acoustic track....
Chemical and biological sensor technologies have advanced rapidly in the past five years. Sensors that require low power and operate for multiple years are now available for oxygen, nitrate, and a variety of bio-optional properties that serve as proxies for important components of the carbon cycle (e.g., particulate organic carbon)....
This study examines the spatial variation of the wind field observed in the coastal zone of southeast Korea with its complex terrain, using measurements from a regional network 75 km across and centered about Busan. Results are compared with observations from an inland regional network centered around Daegu, Korea, with...
An aging electricity distribution system and reduced availability of naturally durable tropical hardwoods in Australia will
combine in the next decade to produce a major shortage of poles. One approach to mitigating this shortage is to utilize lower
durability species and improve the penetration of preservatives into the refractory heartwood...
The initial composition of a river plume depends on the cumulative turbulent
entrainment within the estuary and how this dilutes the supplied freshwater. Here we
examine the relative roles of turbulence and freshwater input using observations from the
Columbia River estuary and plume during two periods with contrasting river flow....
The dynamics of vorticity motions forced by wave groups incident on an
alongshore-uniform barred beach are analyzed. For both normally and obliquely incident
wave groups, the potential vorticity and enstrophy equations reveal that the temporal
variability of wave group–forced vortices is directly linked to the variability in the
incoming wave...
Applying concepts from the behavioral complexity literature (Ashby, 1952; Denison, Hooijberg, and Quinn, 1995) we examine if supply managers’ multiple roles and the ability to shift among these roles is related to their interpersonal relationship with their key contact within the strategic suppliers’ organization and ultimately with the firm-to-firm relationship....
The predictability of coastal ocean circulation over the central Oregon shelf, a region of strong wind-driven
currents and variable topography, is studied using ensembles of 50-day primitive equation ocean model
simulations with realistic topography, simplified lateral boundary conditions, and forcing from both idealized
and observed wind time series representative of...
The materiality and neutrality of neutral density and several forms of orthobaric density are calculated and compared using a simple idealization of the warm-sphere water mass properties of the Atlantic Ocean. Materiality is the value of the material derivative, expressed as a quasi-vertical velocity, following the motion of each of...
In 2006, NASA led a field campaign to investigate the factors that control the fate of African easterly waves (AEWs) moving westward into the tropical Atlantic Ocean. Aircraft and surface-based equipment were based on Cape Verde's islands, helping to fill some of the data void between Africa and the Caribbean....
The synthesis of isoindazoles bearing α-ketoester and α-hydroxyester groups via the coarctate cyclization of ester terminated azo-ene-yne precursors is described. Whereas previous studies on isoindazole formation have shown the reaction to proceed through a kinetic coarctate pathway, functionalization of the terminal acetylene with a methyl ester sufficiently stabilizes the carbene...