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Filtering by: Has journal Proteome Science Remove constraint Has journal: Proteome Science Decade 2000-2009 Remove constraint Decade: 2000-2009

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  • Proteomic analyses of marine bacteria

    Creator:
    Sowell, Sarah M.
    Abstract:
    Proteins are the metabolic machines of the cell and as such, the study of proteins could illuminate the dominant biological activities that are occurring within cells and reveal how an organism interacts with its environment. Here, we used proteomic techniques to study the abundant marine bacterium SAR11 both as an...
    Resource Type:
    Dissertation
    Full Text:
    devoting significant resources to proteome remodeling. A mechanism for a global stationary-phase response

  • Crystallin proteolysis in lens during aging and cataract formation

    Creator:
    Ueda, Yoji
    Abstract:
    The major purpose of this research was to characterize partially degraded proteins appearing in the ocular lens during aging and cataract, and to identify the responsible proteolytic activities. This research is significant, because increased protein degradation is associated with lens opacification and cataract. Determining the sites where lens proteins become...
    Resource Type:
    Dissertation
    Full Text:
    formation AN ABSTRACT OF THE THESIS OF Yoji Ueda for the degree of Doctor of Philosophy in Animal Science

  • Onset of symbiosis in a cnidarian-dinoflagellate association

    Creator:
    deBoer, Melissa L.
    Abstract:
    Scleractinian corals, like many other cnidarians, engage in intracellular symbiosis with dinoflagellates belonging to the genus Symbiodinium. This association makes invaluable structural and energetic contributions to the marine environment and to the coral reef ecosystem in particular. While many aspects of the cnidarian-dinoflagellate relationship have been well studied, nothing is...
    Resource Type:
    Dissertation
    Full Text:
    ............................................ 18 3. The soluble proteome of the scieractinian coral Fungia scutaria and the onset of intracellular

  • A domain-specific embedded language for probabilistic programming

    Creator:
    Kollmansberger, Steven
    Abstract:
    Functional programming is concerned with referential transparency, that is, given a certain function and its parameter, that the result will always be the same. However, it seems that this is violated in applications involving uncertainty, such as rolling a dice. This thesis defines the background of probabilistic programming and domain-specific...
    Resource Type:
    Masters Thesis
    Full Text:
    Master of Science in Computer Science presented on December 12, 2005. Title: A Domain-Specific Embedded

  • Macrophage infection with wild-type Mycobacterium avium or isogenic attenuated PPE mutant revealed differences in gene expression and mycobacterial vacuole proteins

    Creator:
    Jha, Samradhni
    Abstract:
    Mycobacterium avium is a ubiquitous environmental organism found in water and soil. It can cause disease in patients with pre-existing pulmonary conditions, immunocompromised patients with the most prevalent being AIDS patients, as well as apparently healthy people. Studies have indicated that, upon macrophage uptake, Al. avium prevents phagosome-lysosome fusion, thus...
    Resource Type:
    Masters Thesis
    Full Text:
    Master of Science in Veterinary Science presented on June 8, 2006. Title: Macrophage Infection with Wild

  • Gene expression in the liver of rainbow trout, Oncorhynchus mykiss, during the stress response

    Creator:
    Momoda, Tracey S.
    Abstract:
    The extent to which responses to stress are maladaptive or adaptive to the long-term survival of fish remains to be better understood. The aim of this study was to identify differentially expressed genes in the livers of rainbow trout, Oncorhynchus mykiss, responding to an experimental stressor. Gene expression responses were...
    Resource Type:
    Masters Thesis
    Full Text:
    AN ABSTRACT OF THE THESIS OF Tracey S. Momoda for the degree of Master of Science in

  • Changes in grain quality and grain protein composition of winter wheat cultivars under different levels of soil nitrogen and water stress

    Creator:
    Saint Pierre, Carolina
    Abstract:
    Hard white winter (HVVW) wheat cultivars must have superior protein quality and consistent processing quality to be successful in the Asian market. New cultivars and management strategies are needed to produce HVVW grain for both bread and noodle applications from diverse environments in the US Pacific Northwest (PNW). This study...
    Resource Type:
    Dissertation
    Full Text:
    DISSERTATION OF Carolina Saint Pierre for the degree of Doctor of Philosophy in Crop Science presented on

  • Yeast protein release during fermentation and aging in a model wine

    Creator:
    Rowe, Jeffrey D.
    Abstract:
    Yeast mannoproteins released during the process of aging wine on the yeast lees have been reported to make important contributions to wine quality. However, few mannoproteins have been identified in wine and their lifespan during aging is unknown. As a first step towards better understanding the contributions of yeast mannoproteins...
    Resource Type:
    Masters Thesis
    Full Text:
    OF Jeffrey D. Rowe for the degree of Master of Science in Food Science and Technology

  • Proteomic approach to the analysis of DNA-binding proteins using mass spectrometry

    Creator:
    Stapels, Martha Degen
    Abstract:
    In proteomic studies, separate experimental protocols have been necessary to identify proteins, determine their function, and predict their three-dimensional structure. In this study, a function-based separation of proteins was conceived to fractionate proteins prior to enzymatic digestion. In the initial demonstration of this technique, a DNA substrate was used to...
    Resource Type:
    Dissertation
    Full Text:
    CONTACT POINTS BETWEEN DNA AND PROTEINS CONTAINED IN A FUNCTIONAL SUBSET OF A PROTEOME 40 3.1

  • The aging endoplasmic reticulum

    Creator:
    Dixon, Brian M.
    Abstract:
    Hallmarks of aging include the accumulation of aberrant proteins and a lower resistance to stresses. Because the endoplasmic reticulum (ER) functions to fold proteins and possesses unique stress sensing pathways, the central hypothesis of this dissertation is that the ER is a target of cellular aging and significantly underlies these...
    Resource Type:
    Dissertation
    Full Text:
    experience – not necessarily the science herein, although I hope you’ll find that sound as well, but rather