Many libraries offer workshops on research topics such as data management and information organization for graduate students and faculty. We recommend that library workshops focus on teaching skills rather than principles or theories, especially if the goal is to improve data management practices. At Oregon State University Libraries, we have...
Skin condition assessment of wildlife can provide insight into individual and population health. Yet, logistics can limit skin condition assessment of large whales. We developed a standardized, quantitative protocol using photographs to assess skin condition of blue whales in New Zealand, and demonstrate the value gained by testing hypotheses, documenting...
This dataset is based on quantitative PCR (qPCR) output. Output from all qPCR was compiled in this dataset and kept as the original. Information about sampling time, id, concentration, sites and a conversion of the quantity in femtograms were added as complement to the qPCR output to facilitate data analysis
Little is known about intraspecific variation within the deacon rockfish (Sebastes di‐ aconus), a recently described species found in the northeast Pacific Ocean. We in‐ vestigated population structure among fish sampled from two nearshore reefs (Siletz Reef and Seal Rock) and one offshore site (Stonewall Bank) within a <50‐km2 area...
Visible through shortwave (VSWIR) spectral reflectance of the geologic units across the basal Tertiary nonconformity (BTN) is characterized at three spatially disparate locations in California. At two of these sites, location-specific spectral endmembers are obtained from AVIRIS imaging spectroscopy and linear spectral mixture models are used to visualize spatial patterns...
Engineered log jams (ELJs) are commonly implemented in rivers to stabilize streambanks and diversify fish habitat, but few studies have verified the hydraulic benefits of ELJs by assessing their effects on the flow field. This field and modeling study assessed the effects of an ELJ on various characteristics of the...
This data contains results from direct numerical simulations of three-dimensional, premixed, hydrogen/air flames, using the mixture-averaged diffusion model. We performed the simulations using the finite-difference code NGA; simulation details are described completely in the associated article.
Probabilistic flood hazard assessment is a promising methodology for estuarine risk assessment but currently remains limited by prohibitively long simulation times. This study addresses this problem through the development of an emulator, or surrogate model, which replaces the simulator (in this case the coupled ADCIRC+SWAN model) with a statistical representation...
Linden (Tilia spp.), a profusely flowering temperate tree that provides bees with vital pollen and nectar, has been associated with bumble bee (Bombus spp.) mortality in Europe and North America. Bee deaths have been attributed, with inadequate evidence, to toxicity from mannose in nectar or starvation due to low nectar...
1. Globally, river systems have been extensively modified through alterations in riverscapes and flow regimes, reducing their capacity to absorb geophysical and environmental changes.
2. In western North America and elsewhere, alterations in natural flow regimes and swimways through dams, levees, and floodplain development, work in concert with fire regime,...
Environmental history recorded in estuarine sediment describes water quality regimes through the use of geochemical and biological proxies. We collected sediment cores from two locations in the Coos Estuary, Oregon, at South Slough and Haynes Inlet, spanning from ~ 1680 AD to the present. To reconstruct the historical water column oxygen...
Community structure and function in ecosystems are dependent on top‐down and bottom‐up factors, which vary across local, regional, and temporal scales. In estuaries of the U.S. Pacific Northwest coast, eelgrass (Zostera marina) ecosystems are exposed to latitudinally varying oceanographic inputs in the form of ocean upwelling. Previous research suggests that...
This case study explores how to add value to regional ocean condition forecast information by bringing awareness to the processes that govern decision-making and outcomes within the system. A modified mental models research approach is applied to examine differences and similarities in perceptions of risk and comfort with uncertainty between...
In this paper, we introduce a novel algorithm for incorporating uncertainty into lookahead planning. Our algorithm searches through connected graphs with uncertain edge costs represented by known probability distributions. As a robot moves through the graph, the true edge costs of adjacent edges are revealed to the planner prior to...
Whether CaCO₃ dissolves within the top centimeters of marine sediments overlaid by deep, supersaturated bottom waters remains an area of debate in geochemistry. This uncertainty stems from the fact that different methods used to assess CaCO₃ dissolution rates often provide what appear to be profoundly different results. Here we combine...
Arctic freshwater ecosystems have been profoundly affected by climate change. Given that the Arctic charr (Salvelinus alpinus) is often the only fish species inhabiting these ecosystems, it represents a valuable model for studying the impacts of climate change on species life‐history diversity and adaptability. Using a genotyping‐by‐se‐ quencing approach, we...
"Explaining Reinforcement Learning to Mere Mortals: An Empirical Study
This is the dataset for replicating our study, which was accepted to IJCAI '19.
We present a user study to investigate the impact of explanations on non-experts’ understanding of reinforcement learning (RL) agents. We investigate both a common RL visualization, saliency...
Coastal upwelling ecosystems around the world are defined by wind-generated currents that bring deep, nutrient-rich waters to the surface ocean where they fuel exceptionally productive food webs. These ecosystems are also now understood to share a common vulnerability to ocean acidification and hypoxia (OAH). In the California Current Large Marine...
Harbor porpoises (Phocoena phocoena) are commonly observed in Oregon's nearshore marine environment yet knowledge of their ecosystem use and behavior remains limited, generating concerns for potential impacts on this species from future coastal development. Passive acoustic monitoring was used to investigate spatial and temporal variations in the presence and foraging...
Ocean acidification (OA) has had significant negative effects on oyster populations on the west coast of North America over the past decade. Many studies have focused on the physiological challenges experienced by young oyster larvae in high pCO₂/low pH seawater with reduced aragonite saturation state (Ωarag), which is characteristic of...
Climate change impacts on extreme water levels (WLs) at two United States Pacific Northwest estuaries are investigated using a multicomponent process-based modeling framework. The integrated impact of climate change on estuarine forcing is considered using a series of sub-models that track changes to oceanic, atmospheric, and hydrologic controls on hydrodynamics....
A major goal of the Partnership for Interdisciplinary Studies of Coastal Oceans (PISCO) has been to understand the impacts of climate change and variability on the coastal ecosystems of the inner shelf of the California Current Large Marine System in particular, and other marine and even nonmarine systems more generally....
Despite progressive policies and continued advances in ocean management, numerous shifts associated with global changes have been observed in marine ecosystems in recent years, including warming, ocean acidification, and deoxygenation. As global change accelerates, science is needed to inform evidence-based management strategies for continued ecosystem services. Resilience management, in which...
Neste estudo exploratório, de caráter qualitativo, objetivamos compreender a experiência de adolescentes em museus de ciência em visita fora do contexto escolar. Em particular, apresentamos a análise da visita de cinco grupos, entre 14 e 17 anos, de escolas públicas, à exposição “Passado e Presente - ciência, saúde e vida...
Citizen science is a growing phenomenon across many branches of environmental science facilitating both increased science literacy and the collection of highly rigorous, longitudinal data. Understanding the motivations of adults to join and remain active in citizen science programs is important as the diversity and abundance of opportunities for public...
Twenty years ago, the creation of a new scientific program, the Partnership for Interdisciplinary Studies of Coastal Oceans (PISCO), funded by the Packard Foundation, provided the opportunity to integrate—from the outset—research, monitoring, and outreach to the public, policymakers, and managers. PISCO’s outreach efforts were initially focused primarily on sharing scientific...
Extreme water levels generating flooding in estuarine and coastal environments are often driven by compound events, where many individual processes such as waves, storm surge, streamflow, and tides coincide. Despite this, extreme water levels are typically modeled in isolated open-coast or estuarine environments, potentially mischaracterizing the true risk of flooding...
Paper describes the formation of a Center for Digital Scholarship and Services at Oregon State University Libraries with a focus on how the library accomplished digital library and scholarly communication services. The paper describes the goals of the library in this area and the organizational and staffing changes that were...
This dataset contains data layers used and produced by a fuzzy logic model for biomass loss risk under projected climate change in Oregon and Washington west of the Cascade Mountains crest.
Small unmanned aircraft systems (sUASs) are fostering novel approaches to marine mammal research, including baleen whale photogrammetry, by providing new observational perspectives. We collected vertical images of 89 gray and 6 blue whales using low cost sUASs to examine the accuracy of image based morphometry. Moreover, measurements from 192 images...
Despite the fact that the majority of museum visitors are often very young children, much research in museums focuses on pre-teen learners (ages 8–12). Our goal in this study was to investigate the behaviors of children aged 5–8 during a visit to a science exhibition. We aim to develop a...
This qualitative and exploratory study aimed to understand the experience of adolescents during visits outside the school context in science museums and centres, and how the free-choice learning processes are constructed in this context. We analyzed the visits of four adolescents groups, from public schools, to Maloka (Bogotá, Colombia), and...
Aim C-4 grasses are distinct from C-3 grasses, because C-4 grasses respond in a different manner to light, temperature, CO2 and nitrogen and often have higher resource-use efficiencies. C-3 and C-4 grasses are typically represented in earth system models (ESMs) by different plant functional types (PFTs). The ability of ESMs...
The role of volumetric energy density on the microstructural evolution, texture and mechanical properties of 304L stainless steel parts additively manufactured via selective laser melting process is investigated. 304L is chosen because it is a potential candidate to be used as a matrix in a metal matrix composite with nanoparticles...
With more than 407 species of freshwater and brackish water fishes, Gabon is a country rich in ichthyological biodiversity, but its aquatic environments remain poorly explored. We present and describe a new species of Enteromius, adding to the 16 species of Enteromius currently recorded from that country. This new species...
Bedrock (U-Th)/He data reveal an Eocene exhumation difference greater than four kilometers athwart Owens Valley, California near the Alabama Hills. This difference is localized at the eastern fault-bound edge of the valley between the Owens Valley Fault and the Inyo-White Mountains Fault. Time-temperature modeling of published data reveal a major...
Objectives
A growing body of research has found that healthcare discrimination is a significant barrier in accessing healthcare among Latino patients. Despite evidence of the effects of perceived discrimination among Latinos, psychometric testing of scales used in previous research is limited. The present study explored the psychometric properties of a...
Dendrochronological data provides insight in the tree development, and used in conjunction with forest inventory, can supply inputs for growth and yield modeling. However, accurate and precise measurements of a large number of incremental cores require significant resources. One possible source of valuable tree ring data are national forest inventories...
This case study is in response to a recognized need to transform short-term regional ocean condition forecast information into useful data products for a range of end users, considering their perceptions of uncertainty and risk associated with these forecasts. It demonstrates the value of user engagement in achieving long-term goals...
The high school module outlined in this article builds on the strengths of existing resources by incorporating many of their approaches. However, lesson designers intentionally avoided the most common ocean acidification lab (placing shells in vinegar and watching them dissolve) because they found evidence that this experiment reinforces misconceptions about...
In recent years the conservation community has engaged in debate over value in nonhuman nature, especially as it relates to motivations for conservation. Many have expressed the assumption that more people are willing to support conservation when emphasis is placed on the human benefits of nonhuman nature, rather than the...
Long-distance migrants, including Pacific salmon (Oncorhynchus
spp), can use geomagnetic information to navigate. We tested
the hypothesis that a “magnetic map” (i.e., an ability to extract
positional information from Earth’s magnetic field) also exists in a
population of salmon that do not undertake oceanic migrations.
This study examined juvenile Atlantic...
Recognisable debris from the Great Tōhoku Earthquake and Tsunami of March 2011 began arriving on the coasts of Oregon and Washington, USA in June 2012. This debris often carried fouling Japanese marine algae, and there was concern that these species might recruit and invade northeast Pacific shores. From June 2012...
During traditional boat-based surveys of marine megafauna, behavioral observations are typically limited to records of animal surfacings obtained from a horizontal perspective. Achieving an aerial perspective has been restricted to brief helicopter or airplane based observations that are costly, noisy, and risky. The emergence of commercial small unmanned aerial systems...
Carnivore predation on livestock often leads people to retaliate. Persecution by humans has contributed strongly to global endangerment of carnivores. Preventing livestock losses would help to achieve three goals common to many human societies: preserve nature, protect animal welfare, and safeguard human livelihoods. Between 2016 and 2018, four independent reviews...
We propose a time dependent Eulerian model for sea surface entrainment, buoyancy transport and droplet dynamics of ocean oil. The model captures the microscale vertical oil mass exchanges in the neighborhood of the sea surface. This model is in turn part of an oil fate model designed to capture oil...
Aggregations of the neustonic hydrozoan Velella velella occur periodically in the northern California Current. Despite the regular occurrence of notable bloom events in this productive upwelling zone, little is known about their trophic ecology. We used gut content and stable isotope analyses (SIA) to elucidate V. velella prey selectivity and...
Biomass gasification is a promising way to obtain green energy, but the gas composition makes it unsuitable for use in traditional technologies (i.e., IC engine). Gas purification over nickel and/or iron catalysts is an attractive alternative. Cellulose-based carbon aerogels (CAGs) have shown suitable physical chemical properties for use as catalyst...
Coupled models of coastal hazards, ecosystems, socioeconomics, and landscape management in conjunction with alternative scenario analysis provide tools that can allow decision-makers to explore effects of policy decisions under uncertain futures. Here, we describe the development and assessment of a set of model-based alternative future scenarios examining climate and population...
Commercial fishing is deeply embedded in the economy and culture of many communities on the Oregon coast. Recent economic, environmental, and regulatory changes impacting fisheries have exacerbated the need to investigate the relationship between the commercial fishing industry and their host communities. The objective of this study is to examine...
Terrestrial chronologies from southern Greenland provide a detailed deglacial history of the Greenland Ice Sheet (GIS). The northern GIS margin history, however, is less established. Here we present surface exposure ages from moraines associated with two large outlet glaciers, Petermann and Humboldt, in the northwestern sector of the GIS. These...
Pyrosomes are colonial pelagic tunicates that have fascinated marine biologists for over a century. Their name comes from the “fiery” bioluminescence that luminous organs produce at night time. Blooms of pyrosomes, identified as Pyrosoma atlanticum (Peron, 1804), have recently appeared in the North Pacific Ocean, prompting questions about environmental factors...
Understanding larval bivalve responses to variable regimes of seawater carbonate chemistry requires realistic quantification of physiological stress. Based on a degree-day modeling approach, we developed a new metric, the ocean acidification stress index for shellfish (OASIS), for this purpose. OASIS integrates over the entire larval period the instantaneous stress associated...
The influence of the flood pulse on fish populations has been posited, but infrequently tested or quantified. Here, we tested the effect of habitat on population size, using Prochilodus nigricans as a case study species. Floodplain habitat was based on the littoral zone area occupied by P. nigricans to feed....
This study investigates the use of a mobile application, Whale mAPP, as a citizen science tool for collecting marine mammal sighting data. In just over three months, 1261 marine mammal sightings were observed and recorded by 39 citizen scientists in Southeast Alaska. The resulting data, along with a preliminary and...
Mucous-mesh grazers (pelagic tunicates and thecosome pteropods) are common in oceanic waters and efficiently capture, consume and repackage particles many orders of magnitude smaller than themselves. They feed using an adhesive mucous mesh to capture prey particles from ambient seawater. Historically, their grazing process has been characterized as non-selective, depending...
Marine macrophyte wrack (macroalgae and seagrasses) frequently washes onto beaches but little is known about the factors controlling its biogeographic variability. We report on a large-scale study of macrophyte wrack deposition patterns on the US Pacific Northwest coast. We measured macrophyte wrack on 12 sandy beach sites from southern Washington...
Ecotourism is a movement that seeks to sustain local communities by uniting conservation, travel, and education. To minimize effects on animal behavior, ecotourism operations must be carefully managed. Local management efforts that can be tailored to the specific area and animals may be more successful than broad‐scale efforts that may...
We present double-differential measurements of antineutrino charged-current quasielastic scattering in the MINERvA detector. This study improves on a previous single-differential measurement by using updated reconstruction algorithms and interaction models and provides a complete description of observed muon kinematics in the form of a double-differential cross section with respect to muon...
The juvenile demersal fish assemblage along the Pacific Northwest coast has received little attention relative to adult life history stages since pioneering work in the 1970s. Increasing severity of hypoxia along the Oregon coast in recent years has prompted investigations into the response of biota in this region. We used...
A technical definition of artisan breads is proposed, based on the concepts of lean formulations, long fermentations, and the use of process as the primary way to adapt to changing flour qualities. The current status of what constitutes refined flour for artisan bread production is presented and a conclusion drawn...
OBJECTIVE To document the environmental stewardship practices (decisions and actions regarding use and disposal) of pet and human pharmaceuticals and personal care products (PPCPs) among pet-owning veterinary-care professionals (practicing veterinarians, veterinary students, and veterinary technicians and trainees) and environmental educators. DESIGN Internet-based cross-sectional survey. SAMPLE 191 pet owners (103 veterinary-care...
Coastal communities are increasingly experiencing climate change–induced coastal disasters and chronic flooding and erosion. Decision makers and the public alike are struggling to reconcile the lack of ‘‘fit’’ between a rapidly changing environment and relatively rigid governance structures. In efforts to bridge this environment-governance gap in Tillamook County, Oregon, stakeholders...
Background: Despite recent work to characterize gene expression changes associated with larval development in oysters, the mechanism by which the larval shell is first formed is still largely unknown. In Crassostrea gigas, this shell forms within the first 24 h post fertilization, and it has been demonstrated that changes in...
These slides present a practice paper submitted to the International Data Curation Conference 2018, with the same title. Data Management Plans (DMPs) are one of the most widespread tool that has been used in the last decade to encourage good data management practices among researchers. DMPs are a preventive tool...
The particle capture mechanisms of biological filters determine the particle spectrum that is ingested by filter-feeding animals. Although ascidian feeding has been extensively investigated, the organismal-scale fluid dynamics and mesh-scale particle-filter interactions are not fully characterized. Fluorescein dye visualization of flow through the branchial sac of the ascidian Ciona intestinalis...
Organisms use a variety of environmental cues to orient their movements in three-dimensional space. Here, we show that the upward movement of young Chinook salmon (Oncorhynchus tshawytscha) emerging from gravel nests is influenced by the geomagnetic field. Fish in the ambient geomagnetic field travelled farther upwards through substrate than did...
The Western Pacific Ocean barred knifejaw Oplegnathus fasciatus was found from 2013 to 2015 along the Pacific Coast of North America from Washington to California. The knifejaw was found in derelict vessels that had arrived on the Pacific Coast and that had been lost during the March 2011 Great Japan...
This paper describes the development of a course on Digital Libraries taught in Fall 2018 in the Library Management Department at the University of Library Studies and Information Technologies (ULSIT). The instructor, an Associate Professor and Digital Projects Librarian at Oregon State University in the United States, received a U.S....
The sweet potato is one of the world’s most widely consumed crops, yet its evolutionary history is poorly understood. In this paper, we present a comprehensive phylogenetic study of all species closely related to the sweet potato and address several questions pertaining to the sweet potato that remained unanswered. Our...
Many pharmaceuticals have negative effects on biota when released into the environment. For example, recent work has shown that the commonly prescribed antidiabetic drug, metformin (N,N-dimethylbiguanide), has endocrine disrupting effects on fish. However, effects of metformin on aquatic primary producers are poorly known. We exposed cultured isolates of a freshwater...
Movement in an important component of an animal’s life cycle when it relies on both aquatic and terrestrial habitats. When multiple species overlap in the use of these habitats, they rely on other methods to reduce competition for shared resources. This dataset measured the jumping performance and movement behavior of...
The accessions used in this study were comprised of 246 snap bean and 49 dry bean genotypes. Of these, 150 snap bean accessions came from the Common Bean Coordinated Agriculture Project Snap Bean Diversity panel, an assemblage of 59 Chinese snap bean genotypes obtained from a trip to China in...
Herein, we report an efficient combinatorial therapy for metastatic ovarian cancer based on siRNA-mediated suppression of DJ-1 protein combined with a low dose of cisplatin. DJ-1 protein modulates, either directly or indirectly, different oncogenic pathways that support and promote survival, growth, and invasion of ovarian cancer cells. To evaluate the...
Environmental DNA (eDNA) is an emerging biological monitoring tool that can aid in assessing the effects of forestry and forest manufacturing activities on biota. Monitoring taxa across broad spatial and temporal scales is necessary to ensure forest management and forest manufacturing activities meet their environmental goals of maintaining biodiversity. Our...
Micronutrient deficiency, also known as the hidden hunger, affects over two billion people worldwide. Potato is the third most consumed food crops in the world, and is therefore a fundamental element of food security for millions of people. Increasing the amount of micronutrients in food crop could help alleviate worldwide...
This study examined the perceptions of team members of a sister library initiative between Nimbe Adedipe Library, Federal University of Agriculture, Abeokuta, Nigeria and the Valley Library, Oregon State University, Corvallis, USA. An online survey and focus group discussion were used as data collecting instruments. All of the 26 members...
Market rationality suffuses many areas of modern criminal justice. Prison privatization is one area in which market rationality is particularly salient. This paper presents a case study of how market rationality was deployed in public discourse on prison privatization. It answers four questions: (1) Who shaped public discourse on prison...
Suspended metallic carbon nanotubes (m-CNTs) exhibit a remarkably large transport gap that can exceed 100 meV. Both experiment and theory suggest that strong electron-electron interactions play a crucial role in generating this electronic structure. To further understand this strongly-interacting system, we have performed electronic measurements of suspended m-CNTs with known...
Student success units, like Writing Centers, are logical partners for academic libraries. It is not uncommon to find tutoring or academic support services located in library Learning Commons spaces. At Oregon State University, we recently launched a Research and Writing Studio that takes these partnerships to the next level. This...
This article describes the motivation, design, and progress of the Journal of Open Source Software (JOSS). JOSS is a free and open-access journal that publishes articles describing research software. It has the dual goals of improving the quality of the software submitted and providing a mechanism for research software developers...
This study uses semi-structured interviews and an online survey to explore the structure, challenges and outcomes of a five-year National Science Foundation-funded water scarcity modelling project in the Willamette River Basin of Oregon, USA. The research team chose to facilitate broader impacts by engaging stakeholders from the study’s inception (e.g....
The dataset here is used as a document file for presenting supplementary videos in the dissertation Tao, K. (2018). Investigating protein-lipid-membrane interactions in Plant Cells using Bimolecular Fluorescence Complementation (Doctoral dissertation).
Keywords: Protein, Lipid, Membrane, Plant Cells, Fluorescent Imaging
Cytochrome B sequence data (FASTA format) from the paper “Seasonal distribution and environmental associations among late larval and juvenile rockfish (Sebastes spp.) off Oregon and Washington: new insights based on genetics”. The data was generated from a sample of 2534 unknown, field collected late-larval and juvenile rockfishes from the Pacific...
The maintenance of pH homeostasis is critical for a variety of cellular metabolic processes. Although ocean acidification is likely to influence cellular metabolism and energy balance, the degree to which intracellular pH in phytoplankton differs from the external environment under varying environmental pH levels is not well characterized. While there...
The impact of a tsunami can vary greatly across short distances due to differences in topography, building structures, concentration of economic activities in the inundation zone, and economic linkages beyond the inundation zone. This study takes these factors into account in an analysis of a potential tsunami on the West...
As an emerging industry, ocean energy (OE) is expected to play a major contributory role to reach long-term global emissions reductions targets. The offshore environment has become the new frontier for renewable energy production with many high-capacity wind parks and other technologies such as tidal and wave energy being increasingly...
Consultation is increasingly viewed as a critical factor in renewable energy development, including ocean energy (OE) development. Failure to consult the community and other stakeholders and failure to employ the appropriate methods for consultation will, in many instances, impact the successful development and implementation of the OE project. This chapter...
Using a combination of population‐ and individual‐based analytical approaches, we provide a comprehensive examination of genetic connectivity of Dungeness crab (Cancer magister) along ~1,200 km of the California Current System (CCS). We sampled individuals at 33 sites in 2012 to establish a baseline of genetic diversity and hierarchal population genetic...
Many marine mammal predators, particularly pinnipeds, have increased in abundance in recent decades, generating new challenges for balancing human uses with recovery goals via ecosystem-based management. We used a spatio-temporal bioenergetics model of the Northeast Pacific Ocean to quantify how predation by three species of pinnipeds and killer whales (Orcinus...
Many marine mammal predators, particularly pinnipeds, have increased in abundance in recent decades, generating new challenges for balancing human uses with recovery goals via ecosystem-based management. We used a spatio-temporal bioenergetics model of the Northeast Pacific Ocean to quantify how predation by three species of pinnipeds and killer whales (Orcinus...
Worldwide, in recent years capture fisheries targeting lower-trophic level forage fish and euphausiid crustaceans have been substantial (∼20 million metric tons [MT] annually). Landings of forage species are projected to increase in the future, and this harvest may affect marine ecosystems and predator-prey interactions by removal or redistribution of biomass...
We form a new data set of fields of sea level anomalies by combining gridded daily fields derived from altimeter data with coastal tide gauge data. Within approximately 50-80 km of the coast, the altimeter data are discarded and replaced by a linear interpolation between the tide gauge and remaining...
Appendicularians are ubiquitous marine grazers that use tangential filtration to collect micron and submicron prey. The food-concentrating filter (FCF) is the primary determinant of appendicularian prey selectivity, but the precise means by which it concentrates and conveys particles to the pharyngeal filter remain poorly understood. We used high-speed videography to...
Bird scaring lines (BSLs) protect longline fishing gear from seabird attacks, save bait, reduce incidental seabird mortality and are the most commonly prescribed seabird bycatch mitigation measure worldwide. We collaborated with fishermen to assess the efficacy of applying BSL regulations from the demersal longline sablefish fishery in Alaska to a...
Marine microbes exhibit highly varied, often non-spherical shapes that have functional significance for essential processes, including nutrient acquisition and sinking rates. There is a surprising absence of data, however, on how cell shape affects grazing, which is crucial for predicting the fate of oceanic carbon. We used synthetic spherical and...
In this work we examine the dispersion of conservative tracers (bromide and fluorescein) in an experimentally constructed three-dimensional dual-porosity porous medium, and in the absence of adjustable parameters. The medium is highly heterogeneous (σ2 Y = 5.7), and consists of spherical, low-hydraulic-conductivity inclusions embedded in a high-hydraulic-conductivity matrix. The bi-modal...
Koi herpesvirus (KHV) is a highly pathogenic virus of common carp and koi. KHV becomes latent in recovered koi or exposed koi without symptoms, and the latent infection can reactivate under stress conditions. KHV reactivation from latency often occurs when water temperature rapidly rises above 17 °C. Dissolved O2 is...