The diversity of traits in varieties of potato outside of its South American birthplace is a small subset of that available in the Andean center of origin. Among the traits that evoke most interest are skin and flesh pigments. Recent studies have pointed to the high antioxidant activity and potential...
Incorporating a life course perspective, this qualitative study used focus groups to explore the experiences of midlife adults who were simultaneously providing support to emerging adult children and aging parents. Results indicated that adults situated in middle generations held beliefs that endorsed family-based responsibility to both younger and older members....
This paper explores the use and creative application of library metaphors. Unfortunately, the facts aren’t always able to speak for themselves. Simply stating reference statistics, gate counts, and resource circulation numbers are not persuasive narratives in and of themselves. Voice and context needs to be given to these forms of...
Hmong women in the U.S. have low rates of breast and cervical cancer screening, and the factors that influence screening in this population are not well-understood. This qualitative study explored family and clan influences on Hmong women’s breast and cervical cancer screening attitudes and behavior. We conducted in-depth interviews with...
Black men who have sex with men (BMSM) experience among the highest rates of HIV infection in the United States. We conducted a community-based ethnography in New York City to identify the structural and environmental factors that influence BMSMs vulnerability to HIV and their engagement with HIV prevention services. Methods...
We report here that (4R,9Z)-hexadec-9-en-4-olide [(R)-desmolactone] is a sex attractant or sex pheromone for multiple species and subspecies in the cerambycid genus Desmocerus. This compound was previously identified as a female-produced sex attractant pheromone of Desmocerus californicus californicus. Headspace volatiles from female Desmocerus aureipennis aureipennis contained (R)-desmolactone, and the antennae...
The differentiation of precursor cells into mature adipocytes (adipogenesis) has been an area of increased focus, spurred by a rise in obesity rates. Though our understanding of adipogenesis and its regulation at the cellular level is growing, many questions remain, especially regarding the regulation of the metabolome. The 3T3-L1 cell...
Biodiversity information is made available through numerous databases that each have their own data models, web services, and data types. Combining data across databases leads to new insights, but is not easy because each database uses its own system of identifiers. In the absence of stable and interoperable identifiers, databases...
Extensive first-pass metabolism of ingested bisphenol A (BPA) in the gastro-intestinal tract and liver restricts blood concentrations of bioactive BPA to < 1% of total BPA in humans and non-human primates. Absorption of ingested BPA through non-metabolizing tissues of the oral cavity, recently demonstrated in dogs, could lead to the...
Certain bioactive food components, including indole-3-carbinol (I3C) and 3,3'-diindolylmethane (DIM) from cruciferous vegetables, have been shown to target cellular pathways regulating carcinogenesis. Previously, our laboratory showed that dietary I3C is an effective transplacental chemopreventive agent in a dibenzo[def,p]chrysene (DBC)-dependent model of murine T-cell lymphoblastic lymphoma. The primary objective of the...
While sophisticated tools are used to monitor behavioral changes of large marine vertebrates, determining whether these changes are meaningful for management and conservation is challenging. The Population Consequences of Disturbance model proposed a bioenergetics model to detect biologically meaningful population responses, where disturbance costs are linked to lost energy. The...
Engaging large numbers of undergraduates in authentic scientific discovery is desirable but difficult to achieve. We
have developed a general model in which faculty and teaching assistants from diverse academic institutions are trained to teach a
research course for first-year undergraduate students focused on bacteriophage discovery and genomics. The course...
Chile’s open trade policy, implemented during the last few decades, has greatly transformed Chilean farmers and their production systems. As a result, farmers can be grouped into three categories based on their market-production orientation: domestic, transitional or export producers. The objective of this paper is to analyze the factors underlying...
1. Spatial climate variables are routinely used in species distribution models (SDMs) without accounting for the fact that they have been predicted with uncertainty, which can lead to biased estimates, erroneous inference and poor performances when predicting to new settings – for example under climate change scenarios. 2. We show...
In order to better understand the relationships among current Nostocales cyanobacterial blooms, eight genomes were sequenced from cultured isolates or from environmental metagenomes of recent planktonic Nostocales blooms. Phylogenomic analysis of publicly available sequences placed the new genomes among a group of 15 genomes from four continents in a distinct...
The synchrony between coastal and shelf-slope copepod communities was investigated in the northern California Current (NCC) system, a strong upwelling zone, using time series of zooplankton sampled from a nearshore station (9 km offshore, water depth 62 m) and a shelf-slope station (46 km offshore, water depth 297 m). Long-term...
Transcriptional studies in relation to fruit ripening generally aim to identify the transcriptional states associated
with physiological ripening stages and the transcriptional changes between stages within the ripening programme.
In non-climacteric fruits such as grape, all ripening-related genes involved in this programme have not been identified,
mainly due to the...
The ability to determine a bulk estuarine turnover timescale that is well defined under realistic conditions is in high demand for estuarine research and management. We compare how turnover timescales vary with tidal and river forcing from idealized forcing scenarios using a three-dimensional circulation model of the Yaquina Bay estuary...
Snags (standing dead trees) are an essential structural component of forests. Because wildlife use of snags depends on size and decay stage, snag density estimation without any information about snag quality attributes is of little value for wildlife management decision makers. Little work has been done to develop models that...
Snags (standing dead trees) are an essential structural component of forests. Because wildlife use of snags depends on size and decay stage, snag density estimation without any information about snag quality attributes is of little value for wildlife management decision makers. Little work has been done to develop models that...
Marine and terrestrial ecologists rarely exchange information, yet comparing research from both sides of the land–sea boundary holds great potential for improving our understanding of ecological processes. For example, by comparing the interaction between tiger sharks (Galeocerdo cuvier) and dugongs (Dugong dugon) to that between gray wolves (Canis lupus) and...
Many factors should be considered before selecting a graduate program to attend. Graduate education can be expensive, so financial and health care benefits offered by a department or college should be considered when selecting a graduate program. A majority of fisheries graduate students recently surveyed believed that financial aspects should...
We used radio and acoustic telemetry to study the behavior and survival of wild steelhead trout (Oncorhynchus mykiss) and hatchery coho salmon (Oncorhynchus kisutch) and steelhead outmigrants in a small coastal estuary during two years. Survival was generally low for hatchery fish but more variable, both within and between years,...
The Columbia Basin once supported a diversity of native fishes and large runs of anadromous salmonids that sustained substantial fisheries and cultural values. Extensive land conversion, watershed disruptions, and subsequent fishery declines have led to one of the most ambitious restoration programs in the world. Progress has been made, but...
Background:
As Zika virus continues to spread, decisions regarding resource allocations to control the outbreak underscore the need for a tool to weigh policies according to their cost and the health burden they could avert. For example, to combat the current Zika outbreak the US President requested the allocation of...
To measure organismal coherence in a pelagic ecosystem, we used moored sensors to describe the vertical dynamics of each step in the food chain in shelf waters off the west shore of Oahu, Hawaii. Horizontally extensive, intense aggregations of phytoplankton, zooplankton, and micronekton exhibited strong diel patterns in abundance and...
BACKGROUND: Poorly ventilated combustion stoves and pollutants emitted from combustion stoves increase the risk of acute lower respiratory illnesses (ALRI) in children living in developing countries but few studies have examined these issues in developed countries. Our objective is to investigate behaviors related to gas stove use, namely using them...
Background:
In the Ganges Delta, chronic arsenic poisoning is a health concern affecting millions of people who rely on groundwater as their potable water source. The prevalence of anemia is also high in this region, particularly among women. Moreover, arsenic is known to affect heme synthesis and erythrocytes and the...
Genes specifying the thiamin monophos¬phate phosphatase and adenylated thiazole diphosphatase steps in fungal and plant thiamin biosynthesis remain unknown, as do genes for thia¬min diphosphate (ThDP) hydrolysis in thiamin metabolism. A distinctive Nudix domain fused to thia¬min di¬phos¬phokin¬ase (Tnr3) in Schizo¬sacc¬¬h¬aromyces pombe was evaluated as a candidate for these funct¬ions....
Caribbean coral reefs have deteriorated substantially over the past 30 years, which is broadly attributable to the effects of global climate change. In the same time, Indo-Pacific reefs maintain higher coral cover and typically recover rapidly after disturbances. This difference in reef resilience is largely due to much higher coral...
BACKGROUND: Gas stoves emit pollutants that are respiratory irritants. U.S. children under age 6 who live in homes where gas stoves are used for cooking or heating have an increased risk of asthma, wheeze and reduced lung function. Yet few studies have examined whether using ventilation when operating gas stoves...
Soils are globally significant sources and sinks of
atmospheric CO₂. Increasing the resolution of soil carbon
turnover estimates is important for predicting the response of
soil carbon cycling to environmental change. We show that
soil carbon turnover times can be more finely resolved using
a dual isotope label like the...
A stratigraphy-based chronology for the North Greenland Eemian Ice Drilling (NEEM) ice core has been derived by transferring the annual layer counted Greenland Ice Core Chronology 2005 (GICC05) and its model extension (GICC05modelext) from the NGRIP core to the NEEM core using 787 match points of mainly volcanic origin identified...
Surface transient storage (STS) and hyporheic transient storage (HTS) have functional significance in stream ecology and hydrology. Currently, tracer techniques couple STS and HTS effects on stream nutrient cycling; however, STS resides in localized areas of the surface stream and HTS resides in the hyporheic zone. These contrasting environments result...
Heavy biodegraded crude oils have larger numbers of coeluting compounds than non- biodegraded oils, and they are typically not resolved with conventional gas chromatography (GC). This unresolved complex mixture (UCM) has been investigated using comprehensive two- dimensional gas chromatography-time-of-flight mass spectrometry (GCxGC-ToFMS) within a set of biodegraded petroleums derived from...
Background: Functional annotations of large plant genome projects mostly provide information on gene function
and gene families based on the presence of protein domains and gene homology, but not necessarily in
association with gene expression or metabolic and regulatory networks. These additional annotations are necessary
to understand the physiology, development...
We report malt quality QTLs relevant to breeding with greater precision than previous mapping studies. The distribution of favorable alleles suggests strategies for marker-assisted breeding and germplasm exchange.
This study leverages the breeding data of 1,862 barley breeding lines evaluated in 97 field trials for genome-wide association study of malting...
The isotopic composition of water vapour provides integrated perspectives on the hydrological histories of air masses and has been widely used for tracing physical processes in hydrological and climatic studies. Over the last two decades, the infrared laser spectroscopy technique has been used to measure the isotopic composition of water...
Wildfires are keystone components of natural disturbance regimes that maintain ecosystem structure and functions, such as the hydrological cycle, in many parts of the world. Consequently, critical surface freshwater resources can be exposed to post-fire effects disrupting their quantity, quality and regularity. Although well studied at the local scale, the...
Human liver cancer is one of the deadliest cancers worldwide, with hepatocellular carcinoma (HCC) being the most common type. Aberrant Ras signaling has been implicated in the development and progression of human HCC, but a complete understanding of the molecular mechanisms of this protein in hepatocarcinogenesis remains elusive. In this...
The Bering Sea Shelf transitions from ice-free to mostly ice-covered and back again over each winter. Sea ice coverage and the timing of ice melt play a critical role in determining shelf structure and consequently ecosystem response during the spring transition and summer. In this study, a 2-km resolution ocean...
Tides in the Delaware Bay (USA) have been modeled from 7000 years before present (7 ka) to the present day and for selected future sea-level rise scenarios (100 years, 300 years). Historic bathymetries were constructed through use of glacial isostatic adjustment models and a very high spatial resolution (< 100...
A new Fe-based metallic glass with composition Fe₇₆B₁₂Si₉Y₃ (at. %) is found to have extraordinary degradation efficiency towards methyl orange (MO, C₁₄H₁4N₃SO₃) in strong acidic and near neutral environments compared to crystalline zero-valent iron (ZVI) powders and other Fe-based metallic glasses. The influence of temperature (294–328 K) on the degradation...
The strength-normalized fatigue endurance strength of the bulk metallic glass (BMG) Zr₅₂.₅Cu₁₇.₉Ni₁₄.₆Al₁₀Ti₅ (Vitreloy 105) has been reported to be the highest for any BMG; however, to date, there has been no explanation of why this material is so much better than other Zr-based compositions. In this study, the fatigue-crack growth...
Summer streamflows in the Pacific Northwest are
largely derived from melting snow and groundwater discharge.
As the climate warms, diminishing snowpack and
earlier snowmelt will cause reductions in summer streamflow.
Most regional-scale assessments of climate change impacts
on streamflow use downscaled temperature and precipitation
projections from general circulation models (GCMs)...
A new matrix operator framework is developed to analyze results from climate modeling studies that employ numerical water tracers (WTs), which track the movement of water in the aerial hydrological cycle from evaporation to precipitation. Model WT output is related to the fundamental equation of hydrology, and the moisture flux...
Biome function is largely governed by how efficiently available resources can be used and yet for water, the ratio of direct biological resource use (transpiration, E_T) to total supply (annual precipitation, P) at ecosystem scales remains poorly characterized. Here, we synthesize field, remote sensing and ecohydrological modelling estimates to show...
Background: Nonalcoholic steatohepatitis (NASH) is a progressive form of nonalcoholic fatty liver disease and a risk
factor for cirrhosis, hepatocellular carcinoma and liver failure. Previously, we reported that dietary docosahexaenoic
acid (DHA, 22:6,n-3) was more effective than eicosapentaenoic acid (EPA, 20:5,n-3) at reversing western diet (WD)
induced NASH in LDLR-/-...
This report details preliminary studies towards the development of a microfluidic sensor that exploits ferromagnetic resonance, excited in magnetic bead labels, for signal transduction. The device consists of a microwave circuit in which a slotline and a coplanar waveguide are integrated with a biochemically activated sensor area. The magnetic beads...
An ambrosia fungus is described from filamentous sporodochia adjacent to a wood-boring ambrosia beetle (Coleoptera: Curculionidae: Platypodinae) in mid-Cretaceous Burmese amber. Yeast-like propagules and hyphal fragments of Paleoambrosia entomophila gen. nov. et sp. nov. occur in glandular sac mycangia located inside the femur of the beetle. This is the first...