Pseudomonas is a diverse, ubiquitous, and widely studied genus of bacteria. As Pseudomonas species occupy a wide range of niches in the ecosystem, they have made remarkable biological impacts. Better understanding of Pseudomonas biology, genetic diversity, and functional interactions with other organisms and the environment will provide valuable insights into...
Ensuring long term water security is the essential pathway towards development, prosperity, and stability in Afghanistan. However, the country is faced with water challenges that can be ascribed to governance failure at multiple levels of governance rather than to the resource base itself. Hence, studying the water governance system in...
According to a number of scholars in transboundary water management, mistrust is considered to be one of the main obstacles to cooperation, especially for the exchange of hydrological data and information between newly-independent riparian states. The research presented here is focused on identifying the ways in which trust and mistrust...
Basin-wide approach in managing water resources is believed to be the most effective way in addressing upstream and downstream flows. However, this poses certain challenges as water basins tend to be transboundary and include a plethora of stakeholders and their interests. In order to avoid conflictive and rival behavior riparian...
The United States currently has no infrastructure to provide a fast neutron flux for research purposes. With the increased interest in Sodium Fast Reactor (SFR) technology, this type of infrastructure is necessary for further development of key components such as Versatile Test Reactor. The purpose of this research is to...
The 1989 Exxon Valdez oil spill (EVOS) in Prince William Sound, Alaska provided impetus for a great deal of research into the ecosystems of the Northern Gulf of Alaska. Buried within the multitude of resulting impacts, which included hundreds of thousands of oiled seabirds and dramatic ecosystem shifts in the...
Human society is in continuous movement, physically or politically, willing or not . With digitalization and global warming, the pace of change has increased, and unpredictability has grown, challenging society and its institutions to evolve within a highly globalized and interactive environment, while facing even higher uncertainty in the future....
The vertical propagation of Coastal Trapped Waves (CTWs) due to subsurface ridges is explored with the help of linear numerical and analytical models. Results show that submerged ridges projecting from the shoreline can scatter a horizontally propagating single baroclinic mode Kelvin wave into both upward and downward propagating Kelvin wave...
Hazelnuts (Corylus avellana) produce a prolific growth in the base of the trunk and roots, known as suckers, which are often removed in order to promote the development of a single trunk tree. Sucker removal facilitates cultural practices and mechanized operations, such as weed management and harvest. Sucker presence can...
The ubiquity of high quality video and proliferation of mobile devices has contributed to an unprecedented rise in video consumption. HTTP, in conjunction with adaptive streaming, has become the de facto mechanism for delivering the vast majority of video as it readily caters to heterogeneous networks and devices. This dissertation...
The number of deaths by suicide each year in the United States is rising. Men, women, and people of all ages die by suicide at high rates. Someone diagnosed with anorexia or bulimia is at significantly greater risk of completing or attempting suicide, making clear the importance of understanding how...
The United States (U.S.) has seen dramatic growth in installed wind energy generation capacity in recent years, and that growth is expected to remain strong in the near term. The siting of wind energy facilities poses unique challenges that may be exacerbated by increased buildout. As the number of wind...
Sphaerulina musiva is a fungal pathogen that causes Septoria leaf spot and stem canker on susceptible Populus species and hybrids. In this thesis, host and pathogen contributions to Septoria stem canker disease were explored through: 1) a greenhouse study associating Septoria stem canker phenotypes with molecular markers from a genetic...
Conventional wastewater treatment facilities using activated sludge, secondary clarifiers, and chlorine disinfection comprise a large portion of urban wastewater treatment practices in the United States. While highly adept at removing chemical, physical, and numerous biological contaminants, these treatment methods are ineffective at removing contaminants of emerging concern, such as antibiotics...
Potato (Solanum tuberosum L.) is among one of the largest and most important staple food crops in the world. One of the most productive growing potato regions is the USA is the Oregon and Washington Columbia Basin. Both states produce approximately 26% of the USA potatoes in the market. In...
Racehorses are elite athletes that undergo repetitive stresses from jogging, cantering, and galloping exercises, and there is significant evidence that the majority of racehorse musculoskeletal injuries are due to repetitive stress or overuse. Musculoskeletal injuries have negative consequences on the racing industry through the loss of use or death of...
Freshwater systems are an important component of the global carbon cycle as they outgas disproportionately large quantities of carbon compared to the terrestrial landscape. Of particular importance are headwater streams, which represent roughly 90% of the channel network by length and have been conservatively estimated to outgas roughly 36% of...
Deep Learning methods have been gaining a lot of significance for various Biomedical applications for diagnosing several types of diseases. Two applications considered here are: 1) Diabetic Retinopathy Detection and 2) ECG signal Classification (or Arrhythmia Detection). Diabetic Retinopathy (DR) is a major cause of blindness in Diabetic patients, and...
The short-term duration of most ecological studies can make it difficult to capture the long-term dynamics of ecosystems and populations. Infrequent or high-impact events can be missed, or erroneously documented as baselines. Long-term ecological research enables a deeper understanding of complex processes, provides a foundation for future insights, and can...
“Water security” is an umbrella term that explains a wide arrange of concerns over water despite the absence of agreement on its definition and use. Attaching the term “security” to “water” has often been regarded as an act of securitizing water, but its versatile application implies the need to carefully...
The archaeological record of the First Americans is known almost exclusively from interior sites located away from coastal margins. While archaeologists hypothesize that early peoples initially migrated into the Americas along the Pacific coast, environmental changes associated with postglacial sea level rise may have destroyed or obscured such early sites....
The bioavailability of chemical compounds in the marine environment fundamentally influences the growth and physiology of microorganisms. Organic and inorganic chemicals that are produced by some marine plankton can be consumed by other plankton for energy production, growth, or to initiate essential physiological processes. Cultures of the diatom Thalassiosira pseudonana,...
Disentangling sediment source from sediment transport is a fundamental marine geologic challenge critical to the interpretation of any sedimentary record. The Eirik Ridge, a sediment drift south of Greenland, receives terrigenous sediment primarily from subglacial erosion of south Greenland’s Precambrian bedrock and Paleogene volcanics that outcrop in east Greenland and...
Although there is a substantial body of work on the inclusion of women in traditionally male-dominated processes of water management and water governance (Earle & Bazilli, 2013), these efforts have mostly been concentrated in the Global South and women are still lacking in positions with decision-making power, making water governance...
The lagoons spanning Alaska’s Beaufort Sea coast provide a unique habitat for arctic wildlife. These lagoons and the food webs they support face extreme seasonality with nine months of ice cover followed by a spring thaw that pulses a large amount of freshwater and nutrients into the lagoons. Bacteria link...
Although deep reinforcement learning agents have produced impressive results in many domains, their decision making is difficult to explain to humans. To address this problem, past work has mainly focused on explaining why an action was chosen in a given state. A different type of explanation that is useful is...
Sea otters (Enhydra lutris) used to exist along coastlines throughout much of the North Pacific Ocean. During the Maritime Fur Trade, sea otters were extirpated from much of their historic range, including Oregon. There is renewed interest in reintroducing sea otters to Oregon. Managers seek improved understanding of the potential...
International donors play a significant role in the mitigation and prevention of transboundary water disputes and the promotion of cooperation. In doing so, donors can exercise water diplomacy through a wide range of instruments from facilitating or mediating the negotiations to financing capacity building and specific activities in official and...
Through researching CBOs across Washington, Oregon, Northern California, and British Columbia, it is evident that there are need gaps in the organizational capacity in CBOs and other environmental groups for outreach and communication support to collaborate. A dedicated online space where environmental organizations and other conservation-focused groups can share their...
Accurate information of power network parameters is essential for performing various power system monitoring and control tasks including state estimation, economic dispatch, and contingency analysis. In this paper, we present a novel approach of power network parameter correction wherein we exploit the sparse nature of parameter errors. Parameter error correction...
Daily social stressors are important everyday experiences that influence an individual’s daily health and well-being across the lifespan. One pathway through which daily social stressors influence health and well-being is through changes in positive and negative affect. The vast majority of previous research has focused on individual difference characteristics to...
Environmental DNA (eDNA) detection of aquatic invasive species is at the forefront of aquatic conservation efforts because of decreased costs, increased response times, and increase of sensitivity for intercepting invasions with low density populations. Developments in eDNA technologies have improved detection probabilities for rare, indicator, and invasive species over the...
Removing nitrogen from wastewater is critical to avoid eutrophication of receiving waters. Due to its potential economic benefits, the use of anammox bacteria to remove nitrogen from wastewater is gaining in popularity. Anammox bacteria utilize NO₂- to oxidize NH₄+ to N₂. However, anammox bacteria are sensitive to a wide variety...
Vortical structures are the driving mechanism of transition to turbulence in porous media requiring adequately resolved observations along with analysis of the scale and energy of flow within the pores. Of specific interest is to understand the vortex dynamics, energy, and turbulent mixing and transport properties in the scale of...
The Inmaculada Mine is located in the Miocene belt of epithermal deposits that extends from southern Peru to northern Chile and Bolivia. This belt is known for its silver-rich epithermal veins that have been worked since colonial times. The Inmaculada Mine belongs to a mining district that includes, from north...
Raspberries are an important commodity worldwide, with the United States (U.S.) leading fourth in global production in 2017. An important factor when shipping propagated Rubus across the globe is the security of clean plant material verified through pathogen detection methods which is vital in preventing disease spread. A raspberry virus...
A unique microreactor-assisted nanomaterial synthesis and printing process was studied for the fabrication of patterned metal oxide nanostructured thin films. The process uses a continuous flow microreactor to control and generate a reactive chemical flux that was transported to a patterned microfluidic channel. The microreactor-assisted nanomaterial synthesis process can generate...
Policy and research have increased attention in K12 mathematics education on core mathematical practices such as argumentation, justification, and proof, that are central to students learning and doing mathematics. One reason for this increased focus is the empirical evidence that engaging students in mathematical practices provide more equitable opportunities for...
The safety of coastal infrastructure has been a concern after the Indian Ocean Tsunami in 2004 and the Great East Japan Tsunami in 2011. The western coast of the United States is also exposed to tsunami hazards due to the Cascadia subduction zone. Therefore, it is critical to design coastal...
Agricultural tile drainage is one of the major causes of increasing nitrate (NO3-) concentrations in surface water bodies thanks to the usage of nitrogen fertilizers and manure. Denitrifying bioreactors are constructed at the edge of agricultural lands in order to remove NO3- from drainage water through labile carbon substrates intended...
The nasal spray market is growing as rates of use are increasing, however, there has been little research on the topical of how the mechanical properties of nasal sprays affect loading, comfort, and usability. To gather to make these comparisons, the data of 20 participants were gathered by measuring muscle...
This project describes the investigation of marine cyanobacteria collected from the Red Sea with an emphasis on the identification and prioritization of biologically active fractions for future purification and molecular structure elucidation of medicinally relevant secondary metabolites.
Five crude extracts of taxonomically unidentified Red Sea cyanobacteria supplied by Egyptian collaborators...
The data retrieved from gt;momic sequencing techniques provides the raw information required to infer the basis of mutations and their resulting phenotypes, wherein plant ontologies can be utilized in annotating said phenotypes using a common, shared vocabulary. By relating mutant genes of similar phenotypes both within and between plant species,...