Index Catalog // ScholarsArchive@OSU

Genetic resources for advanced biofuel production described with the Gene Ontology

Creator:: Torto-Alalibo, Trudy, Purwantini, Endang, Lomax, Jane, Setubal, João C., Mukhopadhyay, Biswarup, and Tyler, Brett M.
Abstract:: Dramatic increases in research in the area of microbial biofuel production coupled with high-throughput data generation on bioenergy-related microbes has led to a deluge of information in the scientific literature and in databases. Consolidating this information and making it easily accessible requires a unified vocabulary. The Gene Ontology (GO) fulfills...
Resource Type:: Article
Full Text:: , João C. Setubal 2,4 , Biswarup Mukhopadhyay1,2,5 and Brett M. Tyler 2,6* 1 Department of Biochemistry

Sequence verification of synthetic DNA by assembly of sequencing reads

Creator:: Wilson, Mandy L., Cai, Yizhi, Hanlon, Regina, Taylor, Samantha, Chevreux, Bastien, Setubal, João C., Tyler, Brett M., and Peccoud, Jean
Abstract:: Gene synthesis attempts to assemble user-defined DNA sequences with base-level precision. Verifying the sequences of construction intermediates and the final product of a gene synthesis project is a critical part of the workflow, yet one that has received the least attention. Sequence validation is equally important for other kinds of...
Resource Type:: Article
Full Text:: Throughput Biology Center, Baltimore, MD 21205, USA. João C. Setubal, Department of Biochemistry, University

Genetic resources for methane production from biomass described with the Gene Ontology

Creator:: Purwantini, Endang, Torto-Alalibo, Trudy, Lomax, Jane, Setubal, João C., Tyler, Brett M., and Mukhopadhyay, Biswarup
Abstract:: Methane (CH₄) is a valuable fuel, constituting 70–95% of natural gas, and a potent greenhouse gas. Release of CH₄ into the atmosphere contributes to climate change. Biological CH₄ production or methanogenesis is mostly performed by methanogens, a group of strictly anaerobic archaea. The direct substrates for methanogenesis are H₂ plus...
Resource Type:: Article

Variation in Broccoli Cultivar Phytochemical Content under Organic and Conventional Management Systems: Implications in Breeding for Nutrition

Creator:: Renaud, Erica N. C., Lammerts van Bueren, Edith T., Myers, James R., Joāo Paulo, Maria, van Eeuwijk, Fred A., Zhu, Ning, and Juvik, John A.
Abstract:: Organic agriculture requires cultivars that can adapt to organic crop management systems without the use of synthetic pesticides as well as genotypes with improved nutritional value. The aim of this study encompassing 16 experiments was to compare 23 broccoli cultivars for the content of phytochemicals associated with health promotion grown...
Resource Type:: Article

Seasonality and drought effects of Amazonian forests observed from multi-angle satellite data

Creator:: de Moura, Yhasmin Mendes, Hilker, Thomas, Lyapustin, Alexei I., Galvão, Lênio Soares, dos Santos, João Roberto, Anderson, Liana O., Resende de Sousa, Célio Helder, and Arai, Egidio
Abstract:: Seasonality and drought in Amazon rainforests have been controversially discussed in the literature, partially due to a limited ability of current remote sensing techniques to detect its impacts on tropical vegetation. We use a multi-angle remote sensing approach to determine changes in vegetation structure from differences in directional scattering (anisotropy)...
Resource Type:: Article
Full Text:: Moura a,⁎, Thomas Hilker b, Alexei I. Lyapustin c, Lênio Soares Galvão a, João Roberto dos Santos a

Modulation of the chelatable Zn pool in the brain by diethyldithiocarbamate is associated with behavioral impairment in adult zebrafish

Creator:: Braga, Marcos M., Silva, Emerson S., Rico, Eduardo P., Pettenuzzo, Leticia F., Oliveira, Diogo L., Dias, Renato D., Rocha, João B. T., Calcagnotto, Maria Elisa, Tanguay, Robert L., Souza, Diogo O., and Rosemberg, Denis B.
Abstract:: The study of the effects of diethyldithiocarbamate (DEDTC) in some diseases is in focus for many years. However, DEDTC is a metal chelator that can present neurotoxicity as side effects. Here we investigate the effect of DEDTC on brain Zinc (Zn) content and behavior. To address this issue we used...
Resource Type:: Article
Full Text:: Diogo L. Oliveira, a,d Renato D. Dias, a,b João B. T. Rocha, c Maria Elisa Calcagnotto, a,b

The Development of Computational Methods for Studying Plant-Pathogen Interactions

Creator:: Pankow, Rebecca C.
Abstract:: Modern technology has enabled the advancement of biological research through the use of powerful machines and computers as well as innovative computer programs. Advances in sequencing technology and software enable us to make de novo assemblies of organism genomes, and the development of specialized computer programs can automate routine but...
Resource Type:: Honors College Thesis
Full Text:: AN ABSTRACT OF THE THESIS OF Rebecca C. Pankow for

The Impact of Digital Media on Mandala Making in Art Therapy

Creator:: Donahue, Elizabeth C.
Abstract:: In the United States, the utilization of digital media has assumed an omnipresent status and has altered the manner in which we communicate, conduct business, and create art and music. However, it has been demonstrated that art therapy lags behind the current culture of prolific use of digital media. To...
Resource Type:: Dissertation
Full Text:: exploration of the current incorporation of digital media into the field of art therapy, (c) a discussion of

Effect of lactic acid bacteria growth on Brettanomyces bruxellensis growth and production of ethylphenols

Creator:: Chescheir, Stuart C.
Abstract:: The yeast Brettanomyces bruxellensis is the most important wines spoilage yeast encountered during winemaking as it can survive in wine for long periods, requires minimal nutrients for growth, and can be difficult to control. Brettanomyces produces two major spoilage products, the volatile phenols 4-ethylphenol (Band-Aid, medicinal smell) and 4-ethylguaiacol (smoke,...
Resource Type:: Masters Thesis
Full Text:: OF Stuart C. Chescheir for the degree of Master of Science in Food Science and Technology

An investigation into the electrochemical removal of unwanted residual material protrusions from parts

Creator:: Bingham, Bruce C.
Abstract:: Manuscript I: The removal of residual casting material from gating has traditionally been performed by abrasive grinding techniques. However, high amounts of belt wear can occur when working with high strength alloys, especially those typically seen in the aerospace industry. An alternative machining process called electrochemical machining (ECM) uses electrolysis...
Resource Type:: Masters Thesis
Full Text:: AN ABSTRACT OF THE THESIS OF Bruce C

ScholarsArchive@OSU

Genetic resources for advanced biofuel production described with the Gene Ontology

Sequence verification of synthetic DNA by assembly of sequencing reads

Genetic resources for methane production from biomass described with the Gene Ontology

Variation in Broccoli Cultivar Phytochemical Content under Organic and Conventional Management Systems: Implications in Breeding for Nutrition

Seasonality and drought effects of Amazonian forests observed from multi-angle satellite data

Modulation of the chelatable Zn pool in the brain by diethyldithiocarbamate is associated with behavioral impairment in adult zebrafish

The Development of Computational Methods for Studying Plant-Pathogen Interactions

The Impact of Digital Media on Mandala Making in Art Therapy

Effect of lactic acid bacteria growth on Brettanomyces bruxellensis growth and production of ethylphenols

An investigation into the electrochemical removal of unwanted residual material protrusions from parts

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