Index Catalog // ScholarsArchive@OSU

Alternative splicing in the obligate biotrophic oomycete pathogen, Pseudoperonospora cubensis

Creator:: Cumbie, Jason S.
Abstract:: Oomycetes are some of the most devastating pathogens, causing upwards of billions of dollars of damage each year to plants. They also diminish ecological diversity and health through the destruction of trees and shrubs. The genome sequence of Pseudoperonospora cubensis, an obligate plant pathogen and causative agent of downy mildew...
Resource Type:: Dissertation
Full Text:: AN ABSTRACT OF THE DISSERTATION OF Jason S. Cumbie for the degree of Doctor of Philosophy in

Rural community college fundraising : a multi-site case study exploring the characteristics and motivations of alumni supporters

Creator:: Wood, Jason S.
Abstract:: Fundraising in the 21st century is becoming an increasingly important component of rural community colleges' (RCCs) overall funding strategies. Alumni represent a significant population of potential college supporters. The problem facing rural community colleges involves fiscal viability through developing innovative fundraising practices and identifying emerging sources of additional revenue. The...
Resource Type:: Dissertation
Full Text:: AN ABSTACT OF THE DISSERTATION OF Jason S. Wood

Studies Toward the Synthesis of Natural Product Scaffolds

Creator:: Lusk, Jason S.
Abstract:: Part 1: A Diels-Alder Approach to the Synthesis of Novel Analogues of the Natural Product Siamenol Due to the prevalence of biaryl motifs in natural product synthesis, the Carter research group has been exploring the utility of a Diels-Alder approach to biaryl synthesis. The Diels-Alder approach involves a [4+2] cycloaddition...
Resource Type:: Honors College Thesis
Full Text:: THESIS OF Jason S. Lusk for the degree of Honors Baccalaureate of Science in Chemistry presented on

Improved DNase‑seq protocol facilitates high resolution mapping of DNase I hypersensitive sites in roots in Arabidopsis thaliana

Creator:: Cumbie, Jason S., Filichkin, Sergei A., and Megraw, Molly
Abstract:: Background: Identifying cis-regulatory elements is critical in understanding the direct and indirect regulatory mechanisms of gene expression. Current approaches include DNase-seq, a technique that combines sensitivity to the nonspecific endonuclease DNase I with high throughput sequencing to identify regions of regulatory DNA on a genome-wide scale. While this method was...
Resource Type:: Article
Full Text:: facilitates high resolution mapping of DNase I hypersensitive sites in roots in Arabidopsis thaliana Jason S

Toward genome-enabled mycology

Creator:: Hibbett, David S., Stajich, Jason E., and Spatafora, Joseph W.
Abstract:: Genome-enabled mycology is a rapidly expanding field that is characterized by the pervasive use of genome-scale data and associated computational tools in all aspects of fungal biology. Genome-enabled mycology is integrative and often requires teams of researchers with diverse skills in organismal mycology, bioinformatics and molecular biology. This issue of...
Resource Type:: Article
Full Text:: mycology David S. Hibbett1 Biology Department, Clark University, Worcester, Massachusetts 01610 Jason E

Mapping breeding densities of greater sage-grouse: A tool for range-wide conservation planning

Creator:: Doherty, Kevin E., Tack, Jason D., Evans, Jeffrey S., and Naugle, David E.
Abstract:: A major goal in greater sage-grouse (Centrocercus urophasianus, hereafter ‘sage-grouse’) conservation is to spend limited resources efficiently by conserving large and functioning populations. We used maximum count data from leks (n = 4,885) to delineate high abundance population centers that contain 25, 50, 75, and 100% of the known breeding...
Resource Type:: Technical Report
Full Text:: : Interagency Agreement # L10PG00911 By Kevin E. Doherty1, Jason D. Tack2, Jeffrey S. Evans3, and David E

Estimation of Pyrethrum Flower Number Using Digital Imagery

Creator:: Scott, Jason B., Gent, David H., Hay, Frank S., and Pethybridge, Sarah J.
Abstract:: Flower number is the primary determinant of yield in pyrethrum (Tanacetum cineariifolium). Traditional estimates of flower numbers use physical harvesting of flowers, which is time consuming, destructive, and complicated. The precision of flower number estimates may be highly influenced by spatial heterogeneity of plant density and vigor. Here, we examined...
Resource Type:: Article
Full Text:: Using Digital Imagery Jason B. Scott1,4, David H. Gent2, Frank S. Hay3, and Sarah J. Pethybridge3

Alternative Splicing in the Obligate Biotrophic Oomycete Pathogen Pseudoperonospora cubensis

Creator:: Burkhardt, Alyssa, Buchanan, Alex, Cumbie, Jason S., Savory, Elizabeth A., Chang, Jeff H., and Day, Brad
Abstract:: Pseudoperonospora cubensis is an obligate pathogen and causative agent of cucurbit downy mildew. To help advance our understanding of the pathogenicity of P. cubensis, we used RNA-Seq to improve the quality of its reference genome sequence. We also characterized the RNA-Seq dataset to inventory transcript isoforms and infer alternative splicing...
Resource Type:: Article
Full Text:: Oomycete Pathogen Pseudoperonospora cubensis Alyssa Burkhardt,1 Alex Buchanan,2 Jason S. Cumbie,2,3

Literature-Based Gene Curation and Proposed Genetic Nomenclature for Cryptococcus

Creator:: Inglis, Diane O., Skrzypek, Marek S., Liaw, Edward, Moktali, Venkatesh, Sherlock, Gavin, and Stajich, Jason E.
Abstract:: Cryptococcus, a major cause of disseminated infections in immunocompromised patients, kills over 600,000 people per year worldwide. Genes involved in the virulence of the meningitis-causing fungus are being characterized at an increasing rate, and to date, at least 648 Cryptococcus gene names have been published. However, these data are scattered...
Resource Type:: Article

Alternative splicing in the obligate biotrophic oomycete pathogen, Pseudoperonospora cubensis

Creator:: Burkhardt, Alyssa, Buchanan, Alex, Cumbie, Jason S., Savory, Elizabeth A., Chang, Jeff H., and Day, Brad
Abstract:: We re-sequenced the Pseudoperonospora cubensis transcriptome to provide the first extensive transcriptome-wide survey of alternative splicing in an obligate biotrophic pathogen during host infection. The libraries from biological replicates of cucumber leaves infected with Ps. cubensis for 2, 3, 4, and 8 days post inoculation (dpi) were re-sequenced using 100-mer...
Resource Type:: Dataset

ScholarsArchive@OSU

Alternative splicing in the obligate biotrophic oomycete pathogen, Pseudoperonospora cubensis

Rural community college fundraising : a multi-site case study exploring the characteristics and motivations of alumni supporters

Studies Toward the Synthesis of Natural Product Scaffolds

Improved DNase‑seq protocol facilitates high resolution mapping of DNase I hypersensitive sites in roots in Arabidopsis thaliana

Toward genome-enabled mycology

Mapping breeding densities of greater sage-grouse: A tool for range-wide conservation planning

Estimation of Pyrethrum Flower Number Using Digital Imagery

Alternative Splicing in the Obligate Biotrophic Oomycete Pathogen Pseudoperonospora cubensis

Literature-Based Gene Curation and Proposed Genetic Nomenclature for Cryptococcus

Alternative splicing in the obligate biotrophic oomycete pathogen, Pseudoperonospora cubensis

Limit your search

Academic Affiliation

Advisor

Commencement Year

Committee Member

Conference Section/Track

Creator

Contributor

Date

Decade

Degree Field

Degree Level

Degree Name

Language

License

Non-Academic Affiliation

Peer Reviewed

Resource Type

Rights Statement

Subject

Search Constraints

Search Results

Limit your search