Most climate models predict a weakening of the North Atlantic thermohaline circulation for the 21st century when forced by increasing levels of greenhouse gas concentrations. The model spread, however, is rather large, even when the forcing scenario is identical, indicating a large uncertainty in the response to forcing. In order...
The rip current field resulting from the transformation of surface gravity waves over
offshore submarine canyons is studied. Employing a wave transformation model and a
wave-induced circulation model over observed bathymetry we find that wave height
variations associated with undulations in the canyon contours cause rip current circulation
cells with...
Sequence data from nrITS and cpDNA have failed to fully resolve phylogenetic relationships among Pinus species. Four low‐copy nuclear genes, developed from the screening of 73 mapped conifer anchor loci, were sequenced from 12 species representing all subsections. Individual loci do not uniformly support either the nrITS or cpDNA hypotheses...
We evaluated whether bacteria with higher cell-specific nucleic acid content (HNA) or an active electron transport system, i.e., positive for reduction of 5-cyano-2,3-ditolyl tetrazolium chloride (CTC), were responsible for the bulk of bacterioplankton metabolic activity. We also examined whether the phylogenetic diversity of HNA and CTC-positive cells differed from the...
During boreal summer and fall, there is a strong southerly boundary layer flow across the equator into the east Pacific intertropical convergence zone (ITCZ). The modulation of this flow on synoptic to seasonal time scales is studied using an index of meridional pressure difference between the equator and the ITCZ...
We analyze the performance of a planar lens based on realistic negative index material in a generalized geometry. We demonstrate that the conventional superlens design (where the lens is centered between the object and the image) is not optimal from the resolution point of view, develop an analytical expression for...
We employ two different methods to generate controllable elliptical polarization of teraherz (THz) pulses. First, THz pulses are generated via optical rectification in nonlinear crystals using a pair of temporally separated and perpendicularly polarized optical pulses. The THz ellipticity is controlled by adjusting the relative time delay and polarization of...
Form skipping has been used to help injured athletes progress to running.
Because little research has been done on form-skipping mechanics, its justifi cation
as a progression to running exercises is unclear. Objective: To compare groundreaction
forces (GRF) during form skipping and running in healthy subjects at
clinically relevant speeds,...
This article presents a semianalytic method to investigate the properties of energy transmission across bottom topography by barotropic Rossby waves. The method is first used to revisit the analytical estimates derived from wave-matching techniques and Wentzel–Kramers–Brillouin (WKB) approximations. The comparison between the semianalytic method and WKB indicates that the results...
The dependence of the reflectance at the surface on the vertical structure of optical parameters is derived from first principles. It is shown that the depth dependence is a function of the derivative of the round trip attenuation of the downwelling and backscattered light. Previously the depth dependence was usually...
The dielectric spectra of CaCu₃Ti₄O₁₂ is characterized by a large permittivity (εᵣ>10 000) with only a weak dependence on temperature over the temperature range 200–400 K. In this work, doping with 0.1–1.0 wt % ZrO₂ has been shown to dramatically reduce the dielectric loss. At 0.5 wt % ZrO₂, tan...
Meteorological conditions during an intensive oceanographic observational program
in May through August 2001 along the central Oregon coast are described and related to
larger-scale and longer-term conditions. Southward wind stresses of 0.05-0.1 N m⁻²
occurred roughly 75% of the time, with a sustained period of dominantly southward stress
from mid-June...
Three-dimensional ecosystem response to wind forcing on the continental shelf off Oregon is studied using a five-component nitrogen-based ecosystem model coupled to a high-resolution circulation model. We investigate, in particular, the influence of timedependent winds and alongshore variations in shelf topography for summer 2001 during the time period of the...
Time‐dependent, three‐dimensional, upwelling circulation on the continental shelf off the Oregon coast is studied using a primitive equation numerical model. A limited area domain with a high‐resolution curvilinear grid is utilized. The response of the coastal ocean to forcing by observed wind stress and heat flux during the summer 2001...
We construct an extratropical reduced temperature–depth profile for land areas north
of 20°N latitude from the global borehole temperature database compiled for climate
reconstruction. The mean reduced temperature profile compares well with a time series
constructed from an initial baseline temperature (0.6° ± 0.1°C) and the last 140 years
of...
Detailed and repeated measurements of nitrate across the Oregon shelf, made
coincident with turbulence measurements, reveal the importance of cross-isopycnal
mixing via turbulence in providing nitrate to the upper water column. Spatial distributions
of vertical gradients and turbulent fluxes in the Oregon coastal ocean reveal variability that
could not have...
Female calanoid copepods of the family Calanidae can mature with either the juvenile and most typical female pattern of setation, termed trithek (T), or with the male pattern, termed quadrithek (Q). It was suggested by Fleminger (1985), but not proved, that females with the Q pattern have switched from development...
Underground temperatures contain a record of past changes in the energy balance at the Earth's surface, such that borehole temperature data can be used to reconstruct long‐term trends of ground surface temperature (GST) changes. In addition to surface air temperature, however, GST is the response of the ground to other...
Discusses the ease and usefulness of conducting usability studies and provides an example of usability testing at Oregon State University undertaken to improve the DSpace Electronic Thesis/Dissertation (ET/D) submission process.
Observations of sunlight reflected from regions of sun glint are used to check the relative calibration of spectral radiances obtained with imaging radiometers. Reflectances at different wavelengths for sun-glint regions are linearly related. Provided that the atmosphere is reasonably transparent at the wavelengths, the aerosol burden is reasonably light, 0.64-μm...
The Plant Ontology Consortium (POC) (www.plantontology.org) is a collaborative
effort among several plant databases and experts in plant systematics, botany
and genomics. A primary goal of the POC is to develop simple yet robust
and extensible controlled vocabularies that accurately reflect the biology of plant
structures and developmental stages. These...
Energy flux is a fundamental quantity for understanding internal wave generation, propagation, and dissipation. In this paper, the estimation of internal wave energy fluxes <u′p′> from ocean observations that may be sparse in either time or depth are considered. Sampling must be sufficient in depth to allow for the estimation...
Horizontal current measurements from an array of moored acoustic Doppler profilers are assimilated sequentially into a model of coastal wind-driven circulation off Oregon during the upwelling season of May–August 2001. Model results are compared against independent moored and ship survey data to document a positive effect of velocity data assimilation...
Pacific winter waters, a major source of nutrients and buoyancy to the Arctic Ocean, are thought to ventilate the Arctic's lower halocline either by injection (isopycnal or penetrative) of cold saline shelf waters, or by cooling and freshening Atlantic waters upwelled onto the shelf. Although ventilation at salinity (S) >...
Near the bottom, the velocity profile in the bottom boundary layer over the continental
shelf exhibits a characteristic law-of-the-wall that is consistent with local estimates of
friction velocity from near-bottom turbulence measurements. Farther from the bottom, the
velocity profile exhibits a deviation from the law-of-the-wall. Here the velocity gradient
continues...
The physical demands of rapid and economical running differ from the demands of fighting in ways that may prevent the simultaneous evolution of optimal performance in these two behaviors. Here, we test an hypothesis of functional trade-off in limb bones by measuring mechanical properties of limb bones in two breeds...
We measured iron concentrations off the Oregon coast in spring (May–June) and summer (August) of 2001 as part of the Coastal Ocean Advances in Shelf Transport (COAST) program. Dissolvable and total dissolvable iron levels in surface waters were generally higher in spring (mean of 2.1 and 33.9 nmol L¯¹, respectively)...
High electron mobility thin films of In₂₋ₓWₓO₃₊y(0≤x≤0.075) were prepared on amorphous SiO₂ and single-crystal yttria-stablized zirconia (001) substrates by pulsed laser deposition. Mobilities ranged between 66 and 112 cm² /Vs depending on the substrate type and deposition conditions, and the highest mobility was observed at a W-dopant concentration of x~0.03....
Mosquitoes and mosquitoborne disease transmission
are sensitive to hydrologic variability. If local hydrologic
conditions can be monitored or modeled at the scales at
which these conditions affect the population dynamics of
vector mosquitoes and the diseases they transmit, a means
for monitoring or modeling mosquito populations and mosquitoborne
disease transmission...
A primitive equation model is used to study the finite-amplitude evolution of instabilities associated with the coastal upwelling front. Simulations of increasing complexity are examined that represent idealizations of summer conditions off the Oregon coast, including cases with steady and with time-variable wind in a domain with alongshore-uniform bathymetry and...
Results from a model of wind-driven circulation are analyzed to study spatial and temporal variability in
the bottom mixed layer (BML) on the mid-Oregon shelf in summer 2001. The model assimilates acoustic
Doppler profiler velocities from two cross-shore lines of moorings 90 km apart to provide improved
accuracy of near-bottom...
MicroRNAs (miRNAs) are an extensive class of noncoding genes that regulate gene expression through
posttranscriptional repression. Given the potential for large viral genomes to encode these transcripts, we
examined the human cytomegalovirus AD169 genome for miRNAs using a bioinformatics approach. We
identified 406 potential stem-loops, of which 110 were conserved...
Well-defined fronts develop at the seaward edge of riverine plumes where suspended materials and planktonic organisms are concentrated by convergent water flows. Riverine plume fronts have been hypothesized to be favorable fish habitats because they can lead to localized prey
aggregations. We examined the spatial distribution of juvenile Pacific salmonids...
Hop (Humulus lupulus L.) is a perennial, dioecious species in which the female inflorescence (cones) are harvested and used in the beer-brewing process to impart bittering and/or flavoring to beer. Hop breeders have typically utilized clonal selection and hybridization to develop new cultivars. The use of genetically diverse parents for...
Invertebrates are an important food source for grouse chicks, especially within the first 2 weeks of life. Invertebrate abundance is highly patchy and dependent upon herbaceous cover and vegetation structure. We examined the relationship between invertebrate biomass (from sweepnet samples) and habitat structure at lesser prairie-chicken (Tympanuchus pallidicinctus) brood-use and...
A counterflow virtual impactor was used to collect residual particles larger than about 0.1 μm diameter from anvil cirrus clouds generated over Florida in the southern United States. A wide variety of particle types were found. About one-third of the nuclei were salts, with varying amounts of crustal material, industrial...
Changes in snow’s influence on surface ground temperature (SGT) could create a bias
in the borehole temperature record of climate change. Using a snow-ground thermal model
which predicts changes in the mean annual offset between SGT and surface air
temperature (SAT), we calculate the response of SGT to changes in...
Dramatic changes in the physical and biological conditions off Washington and Oregon, USA, have occurred since 1998, including extreme El Niño (warm) and La Niña (cool) years, high and low Columbia River flow years, a major intrusion of subarctic water, and a low oxygen event on the shelf. The occurrence...
Rapid eruption of submarine lava flows during formation of the Caribbean plateau correlates closely with
ocean anoxic event 2 (OAE2), which bracketed the Cenomanian/Turonian boundary (~93.5 Ma). These events
also correspond with a positive excursion in carbon isotopic composition of seawater. Hydrothermal activity
associated with large-scale submarine volcanism may have...
Obtaining global sea surface temperature (SST) fields for the ocean boundary condition in numerical weather prediction (NWP) models and for climate research has long been problematic. Historically, such fields have been constructed by a blending of in situ observations from ships and buoys and satellite infrared observations from the Advanced...
In forest landscape level analyses, forest information is commonly represented by separate polygons, defined by differences in species composition, stand structure, crown closure, and productivity. The simplest approach to projecting yield of stands over the land base is to create an aggregated yield table, weighted by area of each stand...
A new model of the marine ecosystem coupled into a global Earth System Climate Model suitable for long-term (multimillennial timescale) simulations is presented. The model is based on nitrate as the sole limiting nutrient. Prognostic equations for nutrients, phytoplankton, zooplankton, and detritus are solved online in the three-dimensional ocean circulation...
The Moult Rate (MR) method has been used widely to derive stage-specific growth rates in juvenile copepods. It is the most common field-based method. Unfortunately, the equation underlying the method is wrong and, consequently, large errors in juvenile growth rate estimates are widespread. The equation derives growth from the mean...
Errors in eddy correlation measurements from moving platforms (aircraft, ships, buoys, blimps, tethered balloons, and kites) include contamination of the measured fluctuations by superficial fluctuations associated with vertical movement of the platform in the presence of mean vertical gradients. Such errors occur even with perfect removal of the motion of...
Two sources of systematic errors are considered for estimating air temperature. The first source is ambiguity of the definition of the standardized measurement height over vegetated surfaces of varying heights. Without such a standardization, evaluation of the horizontal air temperature gradient is contaminated by the vertical variation of air temperature....
Hop (Humulus lupulus L. var. lupulus) is grown worldwide for the production of the dried female inflorescence (strobulus), or cones, used principally for the bittering and flavoring of beer. Information is scant on the inheritance of traits of economic importance in hop, and present knowledge is based on historical data...
Age-1 and age-2 Pacific halibut Hippoglossus stenolepis were exposed to a range of times in air (0-60 min) and air temperatures (10 degrees C or 16 degrees C) that simulated conditions on deck after capture to test for correspondence among responses in plasma constituents and mortality. Pacific halibut mortality generally...
This paper presents a detailed study of a single thunderstorm anvil cirrus cloud measured on 21 July 2002
near southern Florida during the Cirrus Regional Study of Tropical Anvils and Cirrus Layers–Florida Area
Cirrus Experiment (CRYSTAL-FACE). NASA WB-57F and University of North Dakota Citation aircraft
tracked the microphysical and radiative...