Managing rangelands with livestock grazing is a tool that can be applied to obtain vegetation management objectives. Animals utilize available resources, which vary in quantity and quality, across the landscape. Their movements are adjusted to the spatial and temporal heterogeneity of resource distribution. Controlling livestock distribution is fundamental to economically...
This thesis includes three studies involving different aspects of modeling protein structure. The first study illustrates the levels of insight available from atomic-resolution protein structures. The second study derives general trends of protein geometry from atomic-resolution structures and shows their implications for modeling. The third study creates a model of...
Hydrodynamic models are used as a diagnostic tool to understand the temporal variability of shallow-water processes that are difficult to completely resolve with traditional field measurements. For all simulations, modeled quantities are qualitatively or quantitatively compared with available measurements to gain confidence in conclusions derived from the modeled results. In...
The emerging use of portable digital devices by students, parents and teachers, is forcing schools to develop real-time communication systems that integrate technology into the general operations of schools, and contemplate governing policies and procedures to sustain and guide the challenges of these new technologies. This study contributes to this...
Mycobacterium avium cause disseminated disease in immunocompromised people such as AIDS patients. Subsequent to crossing the intestinal epithelium, M. avium thrive within vacuoles in macrophages. The bacteria exhibit a different, more invasive, phenotype after being in macrophages compared to M. avium from laboratory conditions. We hypothesized that this intracellular phenotype...
Clostridium perfringens is the causative agent of a wide variety of diseases in animals and humans. C. perfringens can produce more than 15 toxins. However, individual strains produce a subset of these toxins. Although a small percentage of C. perfringens isolates (mostly belonging to type A) produce C. perfringens enterotoxin...
This thesis presents a progression of novel planning algorithms that culminates in a new family of diverse Monte-Carlo methods for probabilistic planning domains. We provide a proof for performance guarantees and analyze how these algorithms can resolve some of the shortcomings of traditional probabilistic planning methods. The direct policy search...
In this dissertation, I qualitatively examined the meaning of mothering a child with autism in two countries: the United States and South Korea. The overarching research question focused on how sociocultural ideas about mothering and disability, particularly autism spectrum disorders, shape women’s understanding of themselves and their children with disabilities....
This study investigated how a minority population of Latino/a immigrant children attending a middle school in the Pacific Northwest made sense of engaging with school and school mathematics. A cross disciplinary theoretical framework was used to examine how individual student motivation is impacted by the social context in which the...
The purpose of this study is to explore the applicability of Collins’ (2001) Good-to-Great theory, as originally introduced for the business sector and as adapted for the social sector, to the ways a community college moved from being “good” to being
“great.” The following questions guided the research: (1) Which...
The use of autonomous robots in complex exploration tasks is rapidly increasing. Indeed, robots can provide speed and cost effectiveness in many tasks, as well as allow operation in environments that are hostile to humans. In this dissertation we: 1) provide two adaptive navigation algorithms; 2) develop a coordination mechanism;...
Until a few years ago, wireless-capable laptops were considered novelties by many. It is now hard to find a laptop or a hand-held computing device that is not wireless-ready. As wireless devices are becoming commodities, they have also become an indispensable part of the modern society. Not surprisingly, research in...
Non-destructive testing methods and applications have become of increasing interest due to the worldwide aging and deteriorating infrastructure network. In the field of Civil Engineering, bridges and bridge components as well as non-structural elements such as roadway pavements for example, are affected. In particular, the Acoustic Emission (AE) technique offers...
Rubber without reinforcement has limited applications. The strength of reinforced rubber composites can be ten times stronger than that of unreinforced rubbers. Therefore, rubber composites are widely used in various applications ranging from automobile tires to seals, valves, and gaskets because of their excellent mechanical elastic properties. Silica and carbon...
The respiratory and metabolic biology of dinosaurs is poorly, if at all, reflected in the fossil record. By comparing anatomical features of modern taxa that are functionally linked to specific biology with the remains of theropod dinosaurs (Archosauria: Theropoda) and early birds, we may reasonably infer the physiology of long...
Litter nutrient dynamics contribute significantly to biogeochemical cycling in
forest ecosystems. These dynamics may be influenced by site attributes, litter nutrient concentrations, and soil nutrient availability either independently or synergistically. Litter nutrient dynamics were examined in two decomposition studies in temperate coniferous forests of Oregon. I used ¹⁵N-labelled litter of...
Non-destructive commercial ultrasonic grading provides laminated veneer lumber (LVL) manufacturers a means for sorting veneer based on average ultrasonic propagation time (UPT) and/or average dynamic modulus of elasticity (MOEd). While this may provide reliable estimations of modulus of elasticity (MOE), little is known about the influence of veneer defects on...
The properties and evolution of nonlinear internal waves (NLIWs) depend
upon the background conditions within which waves form, propagate, and dissipate. As a result, the NLIW field on the New Jersey shelf displayed dramatic variability during the Shallow Water 2006 experiment. Wave variability was exhibited by 1) amplitudes that ranged...
Many engineering devices and propulsion systems suffer from undesirable effects of cavitation; such as degradation in the efficiency of pumps and turbines, generation of noise and vibration on ship propeller, increased drag and erosion of propeller blade, etc.
In spite of decades of research on this problem, detailed study of...
A new set of data from a large-scale sand bar migration experiment is presented. During this experiment, two sandbars were generated. One of the bar was generated by the action of undertow, and sediment moved offshore. The other bar was generated by the shoreward movement of sediment coming from the...
This collection of three manuscripts serves to improve methods for collecting, interpreting, and utilizing autocorrelated data from headwater stream networks. Each stream network is comprised of linear segments. These segments lie within a unique branching structure that connects the segments via flowing water, and the connectivity provided by water varies...
Many conditions affecting hydrogen (H₂) production by the cyanobacterium, Synechocystis sp. PCC 6803, were optimized to yield maximum H₂ accumulation. Biological H₂ production from photosynthetic species is a promising form of renewable energy since an abundant supply of sunlight hits the Earth every day, and photosynthetic bacteria can harness this...
Why do rural households leave for urban places? And how does this
decision affect their economic well-being? Rural places in the United States have higher poverty and unemployment rates and lower levels of educational attainment relative to urban places. Does leaving a rural place for a city offer a pathway...
Despite the advances in surgery, physical therapy, and pharmaceutical agents, muscle
dysfunction (i.e., atrophy and weakness) continues to impair recovery from an anterior
cruciate ligament (ACL) injury and surgery. Ischemia-reperfusion injury during surgery
and the subsequent limb disuse are two events experienced by patients having ACL
surgery. Oxidative stress and...
The structural architecture present in marine toxin azaspiracid - 20 stereocenters, 9 rings, 3 separated spirocenters - has attracted considerable synthetic attention. Our efforts toward the synthesis of azaspiracid have led to the completion of both C₁-C₂₆ northern and C₂₇-C₄₀ southern halves. Herein, the
synthesis of southern FGHI ring system...
For Pacific salmon, the evolution of local adaptations depends upon the species' propensity to return, or "home", to natal streams at time of reproduction. Pacific salmon use olfactory cues to guide homing behavior, yet little is known about the genetics of olfaction in salmon. In this study, I use putatively...
Cephalosporium stripe (Cephalosporium gramineum) is an important disease limiting adoption of conservation tillage practices in the Pacific Northwest. The disease can cause severe loss of grain yield and quality in winter wheat (Triticum aestivum L.). Modified cultural practices can reduce disease incidence, but are not always dependable because of variation...
There are typically two responses to the complex environmental problems of our time: 1) doom and gloom and 2) optimism. There is a lot of doom and gloom in the environmental literature. This literature warns that the future portends danger for humans and their life support systems. But when one...
Sprawled-posture insects exhibit a remarkable ability to rapidly run in a stable manner
over complex terrain, a feat that has yet to be equaled by man-made legged robots.
Recent experimental results suggest that these insects may employ a hierarchical
control structure, in which locomotion performance emerges from a combination of...
Reinforcement learning in real-world domains suffers from three curses of dimensionality: explosions in state and action spaces, and high
stochasticity or "outcome space" explosion. Multiagent domains are particularly susceptible to these problems. This thesis describes ways to mitigate these curses in several different multiagent domains, including real-time delivery of products...
Recently, the concept of performance based design has become popular for many types of structures, including port facilities under seismic loading. For the case of pile-supported wharves, the level of performance is generally estimated using the displacement capacity of the structure. Therefore, understanding soil-pile interaction is one of the most...
Many species have complex life cycles in which a dispersive larval stage is
followed by a relatively sedentary adult stage. For such species, reproductive output
is often high and large variation in survivorship throughout early life-history phases
(eggs and larvae) can lead to dramatic fluctuations in recruitment which may in...
Many conventionally reinforced concrete deck girder bridges (RCDG) and their intermediate supporting bent caps were designed during the Eisenhower interstate era of the 1950’s with the AASHO design equations at the time, which subsequently place higher demand on the concrete. The referenced components may exhibit diagonal cracking due to the...
New highly polymorphic simple sequence repeat (SSR) markers for European hazelnut (Corylus avellana L.). were developed from several sources. The markers were characterized, and segregation in a mapping population allowed to assign them to linkage groups. Their transferability across genera and species in the Betulaceae family was investigated. SSR markers...
The vegetation in Yosemite National Park changed during the 20th century and may change in the 21st century in response to climate change. Vegetation surveys made during the 1930s and the 1990s provide benchmark records separated by 60 years. This study uses the MC1 dynamic global vegetation model to forecast...
Interconnection networks play important roles in designing high performance computers. Recently two new classes of interconnection networks based on the concept of Gaussian and Eisenstein-Jacobi integers were introduced. In this research, efficient routing and broadcasting algorithms for these networks are developed. Furthermore, constructing edge disjoint Hamiltonian cycles in Gaussian networks...
Support Vector Machines (SVM) and Random Forests (RF) have
consistently outperformed other machine learning algorithms on a variety of
problems. SVM can be used for classification and regression on many types of
data (e.g. nonlinear, high dimensional), but cannot handle missing or mixed data.
This research implements a permutation-based variable...
The 2-ka eruption of Misti volcano produced voluminous flowage deposits and a wide-spread tephra-fall deposit. The flowage deposits form large terraces within channels draining the south side of the volcano. All the channels drain into the city of Arequipa. Arequipa's city center is ~16 km from the summit of the...
School attendance is perceived as a critical issue in today’s primary and secondary educational systems. This manuscript reviews literature that speaks to the complexity of issues related to truancy and then posits that many of the interventions typically recommended to address truancy are ones that school counselors already provide or...
The original research detailed in this document recognizes that the majority of students with disabilities between 18-69 years of age will attend a community college. The literature also indicates an exponential increase for better job opportunity and earnings relative to individuals with disabilities who attain higher levels of education. This...
The purpose of this study was to investigate third year college students' transfer of learning of the concepts of eigenvalues and eigenvectors from the winter term physics courses to the interviews in which they participated before, during, and after these courses. Transfer of learning of each student was explored
by...
Studies towards the total synthesis of (+)-Phomactin A (1), D (6), and G (9), fungal metabolites with unique molecular architecture and pronounced biological activity, are described. These studies resulted in the synthesis of advanced intermediates 354 and 356, which contain all of the carbon atoms of 1, 6 and 9....
The research‘s purpose was to examine how exemplary community college study abroad programs assisted student participants in acquiring global competence. Three research questions were explored: 1.What issues need to be anticipated when planning a study abroad program for community college students in order to effectively incorporate opportunities for students to...
The Department of Nuclear Engineering and Radiation Health Physics (NE/RHP) at Oregon State University (OSU) has been developing an innovative modular reactor plant concept since being initiated with a Department of Energy (DoE) grant in 1999.
This concept, the Multi-Application Small Light Water Reactor (MASLWR), is an integral pressurized water...
The adduction of proteins and other biomolecules by electrophilic lipid peroxidation products such as 4-hydroxy-2-nonenal (HNE), 4-oxo-2-nonenal (ONE), malondialdehyde (MDA) or acrolein (ACR) is thought to be an initiating and/or propagating factor in the pathophysiology of several diseases such as atherosclerosis, diabetes, Alzheimer's, Parkinson's and other age-related disorders. The identification...
Influenza A and Respiratory Syncytial Virus (RSV) are both enveloped, negative strand
RNA viruses which infect the respiratory mucosa of animals and humans. Despite
decades of research and development of antivirals and vaccines, both of these viruses
continue to be a major health concern throughout the world. The focus of...
The purpose of this exploratory study was to examine scientific arguments constructed by secondary science teachers during instruction. The analysis focused on how arguments constructed by teachers differed based on the mode of inquiry underlying the topic. Specifically, how did the structure and content of arguments differ between experimentally and...
The Change in Alcohol Consumption of Important People to Clients measures the relationship between outcomes of clients’ alcohol treatment and the changes in alcohol consumption by important people (IP) in clients’ social networks. The prevalence of alcoholism in America continues to negatively impact individuals and society, yet few people with...
A striking feature in the study of Riemannian manifolds of positive sectional curvature
is the narrowness of the collection of known examples. In this thesis, we examine the
structure of the cohomology rings of three families of compact simply connected seven dimensional
Riemannian manifolds that may contain new examples of...
The purpose of this study was to better understand the perceptions of employers and graduates regarding the applied baccalaureate degree when conferred by community colleges. By better understanding the perceptions of employers and graduates, community colleges considering offering applied baccalaureate degrees will have some context within which to begin communicating...
General purpose computer systems have seen increased performance potential through the parallel processing capabilities of multicore processors. Yet this potential performance can only be attained through parallel applications, thus forcing software developers to rethink how everyday applications are designed. The most readily form of Thread Level Parallelism (TLP) within any...
The bi-directional relationships within the personal and contextual environments of adolescents are critical to the development of adolescents and their transition into adulthood. Opportunities for youth to participate in and provide leadership in meaningful programs, gain life skills, and interact with adults in sustained relationships are key features leading to...
Two forest management objectives being debated in the context of federally managed landscapes in the US Pacific Northwest involve a perceived trade-off between fire restoration and C sequestration. The former strategy would reduce fuel (and therefore C) that has accumulated through a century of fire suppression and exclusion that has...
Commercial thinning operations can result in damage to residual stems. A literature review revealed that little was known about the effects of residual logging wounds with regard to rotation-age commercial conifers, particularly Douglas-fir. An experiment to examine fungal colonization of Douglas-fir following logging damage showed that while damage was significant...
The purpose of this dissertation was to explore the experiences of Asian group leaders who were leading groups in Asia. This research was developed to address a need for exploratory research in the area of Asian group leaders' perceptions and experiences during the process of leading groups in Asia. Grounded...
Approximately 12% of Americans do not consume the amount of zinc equal to the Estimated Average Requirement for zinc and could be at risk for marginal zinc deficiency. Zinc is an essential component of proteins in the defense against oxidative stress and DNA damage repair. Specifically in the prostate, zinc...
The purposes of this study were to examine the experiences of African American female students attending urban community colleges, to gain further understanding of how they interpret the meaning of persistence, and to identify the factors that affect their persistence. African American women attending community college in Los Angeles were...
The purpose of this study is to examine the role of a Filipino American college student organization at a Predominantly White Institution, and uncover elements of the organization that influence or limit the development of critical consciousness of its members. This study focuses on the aspect of critical consciousness that...
Endothelial activation with increased expression of cellular adhesion molecules, chemokines and pro-inflammatory cytokines critically contributes to vascular inflammation and the initiation and progression of atherosclerosis. By affecting redox-sensitive cell signaling pathways and transcription factors, redox-active transition metal ions, such as copper and iron, may play an important role in these...
Ecosystems are facing increasing threats from human related activities, such as overfishing, pollution, habitat destruction, species invasions, and diseases, among others. While oceanic islands provide natural laboratories to understand ecological and evolutionary process, they are also particularly vulnerable to these impacts, given their usual isolation from the mainland and the...
The use of paraeducators has increased as a main mechanism to include more
students with disabilities in multiple settings in the public schools in the U.S.
Research has examined the use of paraeducators in typical classroom settings but
little is known about their role in physical education. Although the utilization...
The experimental and theoretical bases of transient electric birefringence (TEB) and its application in a variety of nanomaterials, including Na-montmorillonite, cellulose nanocrystals (CNXL), and CdSe quantum dots (QDs) will be presented. TEB is a phenomenon attributed to the alignment of particles in response to an applied electric field and has...
Contract harvest operations have become the preferred approach to reducing the largest cost component of timber production through free market competition amongst logging contractors bidding or negotiating for work. The goal of this research was to investigate economic components of harvesting operations not previously studied for steep slope thinning harvests...
Analysis, visualization, and design of vector fields on surfaces have a wide variety of major applications in both scientific visualization and computer graphics. On the one hand, analysis and visualization of vector fields provide critical insights to the flow data produced from simulation or experiments of various engineering processes. On...
Measurements of social constructs that evaluate natural hazard preparedness are important to decrease natural hazard vulnerability. Preparedness reduces natural hazard impacts and human vulnerability. Investment in education and education research contribute to human sustainable development and natural hazard preparedness. Faced with other needs, people typically do not prepare enough to...
This research effort examined Traditional Ecological Knowledge (TEK) of Siletz tribal members of the environment they live and/or lived in, and how both Western societal beliefs and land reduction to the initially established reservation location affected and altered how the area TEK has been maintained and passed down. The theory...
End users' programs are fraught with errors, costing companies millions of dollars. One reason may be that researchers and tool designers have not yet focused on end-user debugging strategies. To investigate this possibility, this dissertation presents eight empirical studies and a new strategy-based end-user debugging tool for Excel, called StratCel....
The purpose of this case study was to examine a third-grade teacher’s effective use of mathematical discourse in the classroom setting. The study offers insights into the following research questions: 1) How does a teacher’s engagement in mathematical discourse communities influence her practice and self-efficacy as a mathematics educator? 2)...
Real-time, high efficiency neutron spectroscopy has, historically, been a persistent challenge in the field of radiation detection and, for the most part, has gone unsolved. The most promising method to resolve this challenge, is the boron-capture technique using an organic scintillation system (BC-523a). Detectors that utilize this method possess an...
The current appeal of reality television is undeniable, with the specific genre of makeover television having special nationalistic and moral appeal in the United States. Previous analyses of NBC's weight-loss makeover show The Biggest Loser suggest that the program is inherently problematic because of its ingrained fat bias and unethical...
The purpose of this study was to identify and describe the underlying mechanisms within community colleges that influence cross-functional collaboration. The study also explored the role of community college leadership in fostering internal collaboration. The following questions guided the research: (1) What does cross-functional collaboration look like at a community...
The marine climate of the Galapagos is spatially and seasonally
heterogeneous. A taxonomically comprehensive study of Galapagos zooplankton has
never been done. This study is an initial effort to establish the distribution and
community structure of zooplankton in the Archipelago. I collected zooplankton
samples by vertical tows over the Galapagos...
X-ray computed tomography is a noninvasive imaging modality capable of reconstructing exact density values of 3D objects. Computed tomography machines are deployed across the world to provide doctors with an image that reveals more detail than a standard x-ray image. We investigate algorithms based on exact computed tomography reconstruction formulas...