I studied the occurrence of two sympatric morphs of arctic charr, Salvelinus
alpinus (L.) in Vatnshlidarvatn, a small shallow lake in NW Iceland. The arctic charr
were subjectively distinguished by colour and appearance as brown morph or silver
morph, and measured for morphological and life history characters. The study
revealed...
Understanding the origin and nature of intra specific biodiversity enables us to better conserve and manage animal populations. Biological diversity is seen at different scales and for different traits such as behavior, morphology, physiology, and life history. Behavior is especially important since behavioral changes are believed to precede changes in...
With increased resource development on the western Arctic coastal plain of Alaska (especially within the oil extraction industry) it is important to understand the basic life history attributes of whitefish stocks in the region in order to ensure appropriate management. These fish are a crucial part of subsistence harvests for...
The National Park Service has a dual mission of providing public access to exceptional natural resources, but in a manner such that these resources are left “unimpaired for the enjoyment of future generations.” Human activities in parks undoubtedly affect wildlife, but the degree to which such activities cause impairment is...
Alternative male phenotypes in salmonine fishes arise from individuals that mature as either larger and older anadromous marine-migrants or as smaller and younger freshwater residents. Variability in age and size of males at maturity is hypothesized to be preceded by early differences in growth in size and lipid storage. Water...
A hierarchical classification system of Iceland's
watersheds and rivers is presented. The classification
is based on Iceland's substrate, climate, water, biota,
and human cultural influences. The geological formations
of Iceland are very different in character depending on
their age and formation history. Three major types of
formations occur: Tertiary, Plio-Pleistocene,...
Sympatric steelhead and resident rainbow trout (Oncorhynchus mykiss) are known
to exist in many rivers throughout the Pacific Rim. Whether sympatric steelhead and
resident rainbow trout are polymorphisms within a single gene pool or two reproductively
isolated populations has significant implications concerning the study and conservation of
this polytypic species....
The introduction of non-native species can negatively impact native species through reduced genetic fitness resulting from hybridization. The lack of spatiotemporal data of hybrids occurrences makes assessing hybridization risk difficult. Here, I developed a spatially-explicit GIS Hybridization Risk Model (HRM) between native ESA-listed Bull Trout and introduced Brook Trout by...
I evaluated hypotheses related to growth as a driver of depth use and diel vertical migration by bull trout (Salvelinus confluentus) in a thermally stratified reservoir. I applied a bioenergetic model to evaluate growth of bull trout in relation to potential patterns of diel depth use by bull trout in...
The present study investigated the effects of stress and exercise on seawater (SW) adaptation and cortisol dynamics in juvenile steelhead (Oncorhynchus mykiss). To examine the effects of stress, fish acclimated to freshwater (FW) were subjected for 3 hours to confinement stress in FW, and subsequently SW (25 ppt) was introduced...
The evolution and maintenance of multiple phenotypes within populations is an interesting evolutionary and ecological question, and is becoming increasingly important for the restoration and conservation of partially migratory species. In particular, why individuals adopt a particular phenotype has been the focus of numerous research efforts. In the partially migratory...
An approach to understanding and managing anadromous salmon, steelhead,
and sea-run cutthroat trout (Oncorhynchus spp.) based on life history and
evolutionary adaptive capacities of species and stocks is presented. Species, stocks,
and local populations are viewed as systems that are continuously adapting to
changing environmental conditions. They have the potential...
The migrations upstream of pre-spawned adult steelhead (Oncorhynchus mykiss) and
downstream of post-spawned steelhead (referred to as "kelts") can geographically and
temporally overlap in the Snake River, leading to management challenges for populations
listed under the Endangered Species Act (ESA). This thesis describes the development and
application of a method...
Research conducted on humpback whitefish Coregonus pidschian in the Copper River Delta, Alaska has revealed a complex life history involving seasonal migrations and the occupation of a variety of freshwater and marine habitats including lacustrine, riverine, estuarine, and marine. Forty-five whitefish were tagged with radio transmitters in 2006 and 2007,...
Spring chinook salmon, Oncorhynchus tshawytscha, in the Snake River Basin are listed as endangered under the Endangered Species Act. The typical life history of spring chinook salmon is semelparous. An experiment was performed to see if mature male spring chinook salmon parr could be reconditioned after hand-spawning and spawned in...
Genetic diversity of two salmonid species, Dolly Varden (Salvelinus malma) and coastal cutthroat trout (Oncorhynchus clarki clarki) in Prince William Sound, Alaska were examined at multiple spatial scales with three molecular markers. Pleistocene glaciers covered what is now Prince William Sound 8,000- 12,000 years ago and both species colonized the...
Salmon hatcheries have been utilized throughout the Pacific Northwest for many decades to mitigate losses, supplement natural spawning populations, and to provide tribal, sport and commercial fishing opportunities. Currently, there is substantial debate on their efficacy and the potential threats hatchery-reared salmonids pose to natural populations. These concerns have lead...
Ten high mountain ponds in Mount Rainier National Park, Washington State, were
studied from June through September 1992 to investigate the influences of fluctuating
pond volumes on zooplankton communities. A temporary pond of short wet phase
duration was inhabited by zooplankton taxa with short generation times and a crustacean
taxa...
Redband trout density was examined in three forested streams in central
Oregon at two scales, pool channel unit and microhabitat. Two streams were in
roadless areas and one was in a "highly managed" watershed. At the larger
spatial scale, trout displayed a seasonal shift in habitat use from early to...
Lingcod are an overexploited fish species in the Pacific Northwest and although there has been extensive study of the habitat requirements of adults, particularly during spawning, relatively little is known regarding the habitat requirements of post-settlement juveniles. Many juvenile fish use structural components of habitat to alleviate the risk of...
Aquatic ecosystems continue to be increasingly affected by climate warming. For salmonids in the Pacific Northwest of North America, increasing temperatures pose tighter thermal constraints on their habitat use as well as aspects of their individual performance, such as disease resistance. This thesis examines the effect of temperature on the...
Microplastics (<5mm diameter) are present in a considerable number of marine and aquatic species. Understanding which species, the global spatial distribution, and what quantities of microplastics are present is extremely important for understanding the potential impacts they could have on recreationally important organisms and for the assessment of risk. We...
Distribution and life history characteristics of lacustrine-adfluvial bull trout (Salvelinus
confluentus) were described in the North Fork Skokomish River Basin (including Lake
Cushman, a reservoir) from 1994 to 1996. Day snorkeling was conducted in the river to
determine initiation of the bull trout spawning migration, abundance of spawners, and
duration...
The quality and availability of forage fishes and invertebrates can affect the behavior and productivity of predators that rely on these resources. This study measures the proximate composition of forage fishes and invertebrates from the southeastern Bering Sea to estimate prey energy density (quality) using a method that is ecologically...
Our understanding of seasonally disconnected floodplains and how they function to support rearing salmonids in the Pacific Northwest is limited. Past studies have found that these dynamic habitats may provide high-risk, high-reward trade-offs for rearing fish. High prey densities and optimal temperatures allow for accelerated growth, but low water levels...
Pacific salmon (Oncorhynchus spp.) rearing in lakes and reservoirs have been known to become heavily infected with an ectoparasitic copepod (Salmincola californiensis). Little is known about the factors that affect the parasite infection prevalence and intensity. However, previous research suggests that the parasite may negatively affect the fitness and survival...
The relationship of coastal cutthroat trout (Oncorhynchus clarki clarki) populations in the Muck Creek basin, a 238 km² southern Puget Sound stream basin in western Washington, was examined using starch gel electrophoresis and meristic analysis. Coastal cutthroat trout were collected from six sites throughout the basin including tributaries, portions of...
Electrofishing is a sampling tool commonly used by fisheries researchers. While much is known about the effects of electroshock on fish physiology, consequences to the immune system and disease progression have not received attention. To understand the effects of electroshock on immune function we undertook a comparison of electroshock and...
Radiotelemetry was used to study the seasonal movements and habitat use of adult westslope cutthroat trout Oncorhynchus clarki lewisi in Roberts
Creek and Rail Creek, headwater tributaries of the John Day River, Oregon,
from September 2000 to December 2001. The objectives were to (1)
describe adult cutthroat trout life history...
The present study investigated the neurocrine and neuroendocrine control of locomotor activity, habitat choice, social behavior, and migratory behavior in juvenile chinook salmon (Oncorhynchus tshawytscha). This was achieved by the manipulation of three neurotransmitter systems; serotonin (5-HT), dopamine (DA), y-amino-n-butyric acid (GABA) and the neuropeptide corticotropin-releasing hormone (CRH). Chemicals were...
The social sciences have the capacity to contribute to natural resource management through investigations of human dynamics associated with the environment. Sense of place (SOP), the formed relationships between an individual and the environment, has been considered a fundamental aspect of human well-being and can contribute to more holistic understanding...
The importance of hormone reservoirs in mature teleost eggs is
unknown. To elucidate the effects of hormones on embryonic development,
steelhead trout eggs, Oncorhynchus mykiss, were immersed in either cortisol,
testosterone, or thyroxine at two different stages of development. Elevated
concentrations of cortisol were detectable in the trout eggs or...
The distribution of herring (Clupea harengus pallasi) in
the Northeast Pacific extends from southern California to
northern Alaska. Studies on variation in herring life-history
are limited to local
characteristics and recruitment
populations or relatively restricted regions of the Northeast
Pacific. In this study I assessed herring life-history
patterns and recruitment...
Recent research conducted throughout the Northern California Current (NCC) on the ecology of Pacific salmon (Oncorhynchus spp.) indicates that variable ocean conditions affect the community composition of zooplankton in the nearshore environment which, in turn, can affect the quality of prey for fish, sea birds and mammals. Interannual variability in...
Steelhead and rainbow trout are common names for marine-migratory (anadromous) and freshwater-resident forms of Oncorhynchus mykiss, a partially migratory salmonid fish. Anadromous and resident forms are sympatric and can produce offspring with a life history different from their own (i.e., steelhead parents can produce rainbow trout offspring and vice versa)....
Various aspects of the energetic response to handling stress in juvenile
coho salmon (Oncorhynchus kisutch) were examined. Fish were subjected to
four different handling stressors in a Blazka-style respirometer. Stressed fish
had rates of oxygen consumption that were higher than controls. The
magnitude of the increase ranged from 139 to...
Northern anchovy (Engraulis mordax) are a dominant forage fish in the California Current large marine ecosystem (CCLME). However, little is known about northern anchovy abundance, distribution, age structure, or population fluctuations relative to ocean conditions in the eastern boundary upwelling system off the U.S. West Coast. This thesis includes three...
Lahontan cutthroat trout (LCT) (Oncorhynchus clarki henshawi) are currently limited in their distribution to a patchwork of small isolated populations, the result of habitat degradation and natural variation in landscape and in-stream conditions. The objectives of this study were to determine how landscape level topographic features influence LCT distribution patterns....
It is well documented that microplastics and semi-synthetic particles (<5 mm) pervade the marine environment, with their ingestion by marine fauna eliciting global concern. While fishes exposed to microparticles in a laboratory setting have exhibited both sub-lethal and lethal effects, the diversity in material, morphology, and size of these contaminants...
Juvenile Chinook Salmon (Oncorhynchus tshawytscha) have a finite amount of energy that they can use to move from their riverine habitat to their oceanic habitat. Fish in the Willamette River Basin are prevented from moving to the ocean easily by dams which create reservoirs, where they reside for up to...
Current riparian management objectives in the Pacific Northwest promote both retention of existing conifers and conversion of hardwood-dominated areas to conifers. Although understanding of relationships between riparian vegetation and salmonid prey availability is growing, temporal variation in these relationships is poorly understood. Seasonal fluxes in availability of aquatic and terrestrial...
An investigation of the genetic and meristic patterns of coastal cutthroat trout (Oncorhynchus clarki clarki) in two coastal basins, one in Oregon and one in Alaska, revealed varying degrees of differences among populations within each site. Coastal cutthroat trout collected from seven sites above and below barriers from Elk River,...
The California Current Large Marine Ecosystem (CCLME), located on the eastern boundary of the North Pacific Ocean, is highly dynamic, with variable conditions driven by seasonal upwelling, regional oceanography, and broad scale climate patterns. In the last decade, the northeast Pacific Ocean has experienced several marine heatwaves (MHWs), prolonged periods...
The Northern California Current (NCC) ecosystem exhibits extreme seasonal, interannual and interdecadal shifts in the abiotic environment and shifts in primary and higher production. This variability is also apparent in the spatial structure of the ecosystem with nearshore-shelf waters (<150 m isobath) being highly productive and having a different community...
Ecological resources available to freshwater fish shift spatially, temporally and across life stages. To better understand how spatial-temporal availability of resources influence fish, I examined the phenologies of hatching and emergence of Coho Salmon (Oncorhynchus kisutch) in streams with contrasting and strongly defined seasonal thermal variability. The study streams included...
Life-history organization of the cutthroat trout (Oncorhvnchus clarki) may be viewed at various levels, including species, subspecies, metapopulation, population, or individual. Each level varies in spatial scale and temporal persistence, and components at each level continually change with changes in environment. Cutthroat trout are widely distributed throughout the western USA,...
The development of assays for stress in marine fishes is vital for studying the impacts of bycatch in fisheries and for determining the health of fish being cultured or used in research. This research developed behavioral and physiological assays for stress in juvenile sablefish, Anoplopoma fimbria, a species that comprises...
Juvenile Chinook salmon (Oncorhynchus tshawytscha) exhibit an array of life history tactics in Oregon's Willamette River Basin, yet we do not know to what extent it is driven by phenotypic plasticity or whether it is predetermined and how conditions in the early rearing environment may affect phenotype expression. We have...
Newly emerged steelhead fry (Oncorhynchus mvkiss) of hatchery and
wild origins were studied in laboratory stream channels and natural
streams. Objectives of the study were to determine if and how earlier
emerging hatchery fry influence the emigration, realized densities,
growth, habitat use, social structure, and activity patterns of
localized populations...
Effects of the marine environment on age and size at maturity, early marine growth, and abundance of chum salmon, Oncorhynchus keta, were studied at Olsen Creek during 1959-77. Chum salmon returned to Olsen Creek as predominately 3-, 4-, and 5-year fish; however, age composition varied from year to year. The...
For Pacific salmon, the evolution of local adaptations depends upon the species' propensity to return, or "home", to natal streams at time of reproduction. Pacific salmon use olfactory cues to guide homing behavior, yet little is known about the genetics of olfaction in salmon. In this study, I use putatively...
Headwater streams in the Oregon Coastal Range are subject to drastic fluctuations in flow and temperature because of the changing seasonality of a Mediterranean climate. In response to these changes, stream fishes exhibit a variety of movement patterns. Coastal Cutthroat Trout (Oncorhynchus clarkii clarkii) have evolved an assortment of life...
In Southeast Alaska, Eulachon (Thaleichthys pacificus) are a culturally and biologically important anadromous fish. Eulachon populations have significantly declined in the southern part of their range, and in 2010 eulachon in northern California, Oregon, and Washington were listed as a threatened species under the Endangered Species Act. In the same...
The early marine phase following freshwater emigration has been identified as a critical period in salmonid (Oncorhynchus spp.) life history, characterized by high but variable mortality. Consistent with the “growth-mortality” and “bigger-is-better” hypotheses, at least some of the mortality during the critical period appears to be size-dependent – with smaller...
A series of experiments with Aeromonas salmonicida and infectious
hematopoietic necrosis virus (IHNV) were carried out to determine dynamics of the
spread of infection in chinook salmon (1.2-1.98g) and rainbow trout (1.2-3.1g). It was
found in experiments with A. salmonicida that fish infected by bath immersion became
infectious at 4...
Wild populations of fish are faced with a multitude of stressors, which may include human interaction, toxins, and disease. Benzo(a)pyrene (BaP), a known carcinogen and immunotoxin, has been reported in the stomach contents of juvenile chinook salmon, Oncorhynchus tshawytscha, in urban waterways. We investigated the impact of chronic dietary exposure...
The work presented in this dissertation examines possible
modes of action for growth inhibition by anthropogenic endocrine
disrupting chemicals (EDCs) as well as endogenous hormones
associated with growth in fish. Using the sheepshead minnow (SHM)
(Cyprinodon variegatus) as a model, I developed methods to examine
perturbations in the endocrine axis...
Depleted species of rockfish (Sebastes spp.) from the Northeast Pacific experience high discard mortality due to "barotrauma," induced from the rapid change in pressure during capture. Research suggests rockfish have the potential to survive barotrauma if immediately recompressed, but the potential for long-term recovery is unknown. In this project, we...
Chinook salmon, Oncorhynchus tshawytscha, returning to the Yukon River basin and other large river systems in western Alaska have declined dramatically since the late 1990s. This continuing trend has raised concerns over the future status of the returns, and severely impacted commercial and subsistence fisheries within the drainage. Management is...
Understanding how populations within a species interact across various geographic and temporal scales is fundamental to developing appropriate conservation strategies. I examined the geographic variation in genetic and meristic characters of coastal cutthroat trout (Oncorhynchus clarki clarki) based on
approximately 1,400 fish sampled from 54 populations spanning their distributional range...
The relationship between population characteristics and population productivity is fundamental to sustainable fisheries management, but predicting productivity remains a challenging task. Proposed mechanisms driving the variability in productivity at a given population size have included environmental and demographic factors related to the age structure of the population, but the broad-scale...
Sampling error associated with estimates of species composition and age composition
of commercial groundfish landings in Oregon from 1989 to 1991 is documented to evaluate
the impact of variable landing data on fisheries management and monitoring programs. The
statistical reliability and bias associated with two multistage sampling designs are
investigated...
Shellfish growers have expressed interest in developing high-yielding oyster strains through selective breeding. This dissertation has three objectives to help determine the effects of genetic and environmental variation on production traits (body weight, survival, and yield) of Pacific oysters grown in the Pacific Northwest. Objective 1: Determine if relative family...
Understanding food webs is fundamental in conserving endangered species and maintaining healthy ecosystem function, particularly in desert spring systems. We identified dominant energy sources in the Muddy River Warm Springs area, Clark County, NV using carbon and nitrogen natural abundance stable isotope analyses. We examined isotopic signatures of specific macroinvertebrate...
Recognizing the importance of native black cottonwood-dominated riparian
forests is especially important to preserve, protect, and manage for biodiversity in
the Willamette River Valley. Species composition, structure, and biomass along a
successional gradient from stand initiation to late succession of black cottonwood
(Populus balsamfera L. subsp. trichocarpa (T. & G.)...
Understanding seasonal changes in growth, survival, and movement rates is
crucial to salmonid management. These life history characteristics provide a context for
evaluation of management actions. We evaluated the life history of individually
marked Oncorhynchus mykiss gairdneri in the South Fork John Day River basin in
Northeastern Oregon. This thesis...
Food webs are fundamental in ecology, as they offer a way to better understand the interrelatedness, connectivity, and complexity within a given ecosystem. The use of network analysis to model food webs can provide insights about the importance of physical templates on the organization of biological systems in streams using...
Microplastics are ubiquitous in our oceans, yet we are still clarifying what risks they pose to marine organisms, which can be challenging due to their trait diversity and spatial patchiness. Laboratory-based studies assessing risk demonstrate that many marine animals internalize microplastics, either actively through ingestion or passively via respiration. However,...
The structure of food webs and how they relate to community stability has been an important debate in ecology. Specifically, predictability of web shape and how it influenced by surrounding landscapes is one of the main goals of such discussions. Headwater streams provide a study template that is of interest...
The typical coho salmon life history has been characterized by juvenile fish that spend their entire first year in freshwater habitats before migrating into estuaries as smolts. However, reports of early migrating coho fry (age 0), including migration downstream to estuarine habitats, date back to the 1960s. Until a few...
Two studies on Catherine Creek and Meadow Creek of the Upper Grande Ronde
River basin, quantified several physical and biotic influences on woody riparian community
composition and structure. The Catherine Creek study examined the association of woody
riparian species with elevational and geomorphic gradients. The Meadow Creek study
examined the...
In the summers of 1998 and 1999, aquatic invertebrate and plant communities were sampled from nineteen springs in the Warner Basin of southeastern Oregon. Across the landscape, these springs exhibited a broad range in water temperature (5-24°C), pH, conductivity, elevation, and gradient. Within a particular spring, water temperature and chemistry...
Management strategies to prevent overfishing while achieving optimum yield vary according to the available data and life history of the fished stock. I evaluated two sets of management strategies for Pacific coast rockfish: strategies to set harvest limits for data-poor stocks, and strategies intended to protect the age structure of...
Processes of metamorphosis, settlement, and growth were examined in Pacific sanddab
using field studies and otolith microstructure. This flatfish transforms at large sizes, has a
gradual metamorphosis, and settles to a nursery on the middle continental shelf. Eye migration
takes 3 months and "metamorphosis proper" which begins after completion of...
Zebrafish, Danio rerio, are widely used as vertebrate research organisms yet little is know about their responses to husbandry stressors. This dissertation examined the whole-body cortisol responses of zebrafish to husbandry stress. Additionally, the effects of stress on the susceptibility to mycobacteriosis and microsporidiosis (Pseudoloma neurophilia) were determined including effects...
Devaleraea mollis (Pacific Dulse) is becoming a popular food for human consumption. Previously, Pacific Dulse has been used as a nutrient source for cultured abalone species, with some historical food use by indigenous peoples, while the closely related Atlantic dulse (Palmaria palmata) has a long-documented history of use in cuisine...
The anadromous Pacific Lamprey (Entosphenus tridentatus) is a biologically and culturally important species native to the North Pacific Ocean and its adjacent freshwater tributaries. Pacific Lamprey have experienced declines in abundance and distribution throughout their native range, highlighting a need for further research on the species to better inform conservation...
Humans have drastically altered the physical habitat and food web structure of stream ecosystems. Two major impacts humans have had on Pacific Northwest streams are modification of streamside forests (as a result of agriculture, land development, and timber harvest), and declines in the return of wild anadromous salmon to headwater...
Although differences between selective pressures in hatcheries
and streams have been theorized to cause genetic divergence between
hatchery and wild salmonids, evidence of this is lacking. This study
was initiated to document the presence or absence of genetic change
in hatchery and wild stocks by characterizing genetic traits in fish...
Evidence for reduced reproductive success (RS) of wild spawning hatchery-reared fish invites serious consideration with regard to the detrimental effects on subsequent generations of wild populations. Mate choice was evaluated as a potential mechanism contributing to these observed RS differences using a previous pedigree of wild spawning hatchery-reared and wild...
Upper Klamath Lake in southern Oregon has two species of lacustrine suckers,
Lost River sucker Deltistes luxatus and shortnose sucker Chasmistes brevirostris that
were historically abundant. Results of surveys performed in the mid-1980's indicated that populations of both species were declining and ageing with apparent recruitment failure in most years...
Tidal marshlands in the upper estuary ecotone provide essential habitat for
juvenile salmonids. In this environment, salmonids grow rapidly and acclimate to
saltwater. Worldwide, tidal marshes have been diked and drained to provide
agricultural and residential land. Tide gates are one-way doors integrated into
dike systems that prevent saltwater flooding...
This thesis provides the first general description of the natural variation in age
structure, growth rates, and survival in headwater populations of coastal cutthroat
trout Oncorhynchus clarkii clarkii from western Oregon, and a subsequent
synthesis of these life-history characteristics across the range of the subspecies.
Age, growth, and survival were...
Climate change is a global phenomenon, but natural selection occurs within landscapes. A central tenet of landscape ecology is that mobile species depend on complementary habitats, which are insufficient in isolation, but combine to support animals through the full annual cycle. For coldwater fishes, it is widely assumed that maximum...
The United States Pacific Northwest is well known for its shellfish farming. Historically, commercial harvests were dominated by the native Olympia oyster, Ostrea lurida, but over-exploitation, habitat degradation, and competition and predation by non-native species has drastically depleted their densities and extirpated many local populations. As a result, shellfish aquaculture...
Conceptually, the dynamics of wood in streams can be viewed in terms of input and in-channel processes. Input processes are associated with both the riparian (tree fall, bank cutting, windthrow) and upslope forests (mass failures). In-channel processes include log breakage, movement, and decomposition. A mechanistic view of these processes is...
The California Current Ecosystem (CCE) is a dynamic marine ecosystem from which many socioeconomically important fisheries species are harvested. In this thesis, a genotyping-by-sequencing (GBS) approach was used to examine genomic variation in an early life stage of the Dungeness crab (Cancer magister), which constitutes the most valuable single-species commercial...
Small-scale fisheries (SSF) around the world face many challenges. They are a highly dynamic, important sector for coastal communities in developing nations, playing a critical role in poverty alleviation and food security. SSFs generally have few resources to ensure their long-term sustainability. They are often fished and managed locally and...
Of 109 aquatic birnaviruses (AB) belonging to 9 serogroup A, all replicated and produced rapid and extensive cytopathology in CHSE-214 and RTG-2 cells, whereas only half produced significant levels of cytopathological effect (CPE) in two nonsalmonid cell lines tested (EPC and FHM). In many instances it was found that although...
Channels that were scoured to bedrock by debris flows provided unique opportunities to calculate the rate of sediment and wood accumulation, to make inferences about processes associated with input and transport of sediment, and to gain insight into the temporal succession of channel morphology following disturbance. In an intensive investigation...
We assessed use and selection of cover by coastal cutthroat trout (Oncorhynchus clarkii
clarkii) in six headwater streams in three watersheds in western Oregon, USA during the summer low flow period from 1 August and September 30, 2007. We tagged 1037 coastal cutthroat trout (>100 mm) with passive integrated transponder...
Somatic growth variation manifests from the cumulative effects of a suite of biological, ecological, and environmental processes and can have profound effects on individual fitness and species population dynamics. As ectotherms whose growth dynamics are greatly influenced by environmental factors, sea turtles display considerable variation in somatic growth within and...
The average size and age of chinook salmon (Oncorhynchus
tshawytscha) caught in commercial fisheries along the Pacific Coast
of North America have decreased substantially in this century. These
declines might be caused in part by changes in size and age at
maturity within the stocks contributing to those fisheries. Upriver...
Salmonid run sizes are strongly affected by their early marine stage. Fully understanding the life history of salmonids means understanding how they interact with their marine environment and with other fishes. Changes in the biological and physical environment off the Columbia River region affects the distribution and abundance of predatory...
More than 1500 species of plants and animals in the United States are listed as threatened or endangered under the Endangered Species Act (ESA). The U.S. Departments of Interior and Commerce are required, under Section 4(f)(1) of the ESA, to develop recovery plans for ESA-listed species under the respective agency...
Marine bivalves are globally recognized as ecologically and commercially valuable species and, for over a century, researchers have been studying their feeding, digestion and other related physiological processes. These studies have shown that marine bivalves have complex feeding and particle processing behaviors to maximize growth in dynamic environmental conditions. Additionally,...
The Middle Fork John Day River is composed of low gradient, alluvial valley
segments separated by constrained, canyon-like reaches, and has a history of multiple
land-uses. These factors can alter the physical and biological structure of streams, and
disrupt the longitudinal river continuum. I examined habitat, fish, macroinvertebrates,
and primary...