Of 2,122 marine fishes belonging to 36 species collected in the
vicinity of Newport, Oregon, 541 belonging to 8 species were infected
with hemoflagellates. Four species of trypanosomes and three species
of cryptobias were found in offshore fishes, but no hemoflagellates
were observed in fishes from Yaquina Bay.
Trypanosoma pacifica...
The microsporidan Pleistophora sp. is a common parasite of
Crangon franciscorum, C. nigricauda, and C. stylirostris in the
vicinity of Yaquina Bay, Oregon. Characteristics of the parasite are
described. Skeletal muscle was the only host tissue infected.
The seasonal prevalence and intensity of the parasite in
crangonids are described, based...
The term "interaction" in evolutionary biology and ecology
describes the relationships among variables in two classes of causal
models. In the first, "interaction" refers to the influence of a
single putatively causal variable on a variable of interest. In the
second class of models, the term applies when a third...
Multiple successional sequences have been observed following disturbance in communities on marine hard substrata. Observations of the turf-forming alga, Iridaea cornucopiae Post. & Rupr. (Gigartinaceae), suggest that I. cornucopiae may assume its dominance by its ability to vegetatively pre-empt space. High limpet densities in the natural community, suggest that I....
Breeding ecology and behavior were investigated in a field study of three sympatric anuran amphibians in the Oregon Cascade Mountains: the western toad (Bufo
boreas), the Cascades frog (Rana cascadae) and the Pacific treefrog (Hyla regilla). A comprehensive study of the western toad mating system was conducted at three populations...
My dissertation focuses on the evolutionary forces that have shaped the chemical signaling system of plethodontid salamanders. Pheromones mediate two phases of plethodontid reproduction: mate attraction prior to courtship and female persuasion during courtship. Substrate-borne chemical signals are believed to play an important role in mate attraction for these animals....
Climate change is predicted to affect ecosystems, including systems already stressed by human impacts. One ecosystem that is already highly impacted by human land use is the cold headwater stream system of the Pacific Northwest. One method of assessing the function of an ecosystem is by using an indicator species....
My dissertation focuses on the factors that influence variation in female reproductive success in plethodontid salamanders and in toads. Variation in reproductive success fuels evolutionary change. Although, females often have been overlooked in studies of reproductive success due to perceived lower levels of variation when compared to variation in male...
I examined two amphibian communities to assess factors
that may impact amphibian biodiversity. The results suggest
that the potential factors which influence the maintenance
of amphibian biodiversity are multi-faceted and thus,
attempts to understand these factors must reflect these
complexities.
I investigated factors that influenced the susceptibility
of western toad...
A major goal of conservation biology is to elucidate the population genetic structure in threatened species and assess the relative importance of the evolutionary forces that shape that population genetic structure. I conducted three studies in the declining amphibian Rana cascadae to assess levels of population genetic differentiation and the...
The current rate of global biodiversity loss and extinctions is unparalleled and a major concern. Freshwater organisms are facing particularly rapid rates of biodiversity loss. Amphibians, which require an aquatic environment for part of their life cycle, are one of the most vulnerable vertebrate groups. Amphibians are experiencing population declines,...
Chemoreception is one of the dominant sensory modalities for many species of salamanders (reviewed in Chapter 2). At least seven of the ten currently recognized salamander families are known to respond to some sort of chemical cue. These responses are as varied as delaying hatching, seeking refuge, or initiating aggressive...
Animal signaling systems frequently utilize multiple traits to produce and transmit a signal. These system elements may span multiple levels of organization. Functional integration of these traits may be expected to generate concordance in evolutionary pattern among system elements, such that evolutionary change in one system component is correlated with...
Darwin devised the evolutionary theory of sexual selection to account for the manifold extravagances of courtship behaviors and displays. Mating interactions represent a major evolutionary process driving the elaboration, vibrancy, and peculiarity of these courtship traits. For my dissertation research, I strived to elucidate the dynamics that constitute the complex...
Environmental stress can negatively affect the ability of organisms to reproduce. Energetic trade-offs exist in all organisms, and under stress, energy may be allocated away from reproduction and towards physiological defense and repair mechanisms. The rocky intertidal environment is ideal for investigating the influence of environmental stress, as organisms are...
Previous attempts to understand the factors affecting the energetic cost of locomotion have found a direct link between the energetic cost and the mechanical work done during periods when the limb is in contact with the ground. However, when the limb is not in contact with the ground during the...
The breeding habits and embryonic thermal requirements of the
Cascade frog of Oregon, Rana cascadae Slater, are described. The
limits of temperature tolerance of the pre-feeding stages are from
6° to 27°C for embryos held at constant temperatures. However, for
pre-feeding embryos exposed at different developmental stages for
short durations...
The intracellular mutualism between cnidarians and photosynthetic dinoflagellates (genus Symbiodinium) is responsible for the physical and trophic structure of diverse coral reef ecosystems. This relationship, based on nutrient exchange, allows for high productivity in tropical waters, which are generally nutrient-poor environments. Numerous environmental stressors currently threaten the health of corals,...
Seven species of fresh water fishes belonging to three different
families and two species of snails from Ritner Creek, Polk County,
Oregon were surveyed for adult and larval trematodes. A total of
seven species of trematodes representing four families was recovered
from the intestine of the fishes. Of these, at...
Sialic acids are involved in many cellular interactions. They can serve as an adhesion ligand or act as an inhibitor to cellular adhesion by charge repulsion or by masking potential ligands. Although sialic acids are implicated in the process of blastocyst implantation, their expression and regulation in uterine epithelium of...
The symbiosis between cnidarians, such as corals and sea anemones, and photosynthetic dinoflagellates belonging to the genus Symbiodinium spp. is one of the most productive in the marine environment. This mutualistic endosymbiosis allow reef-building corals to lay down the foundation of coral reef ecosystems, which supports a highly biodiverse community...
The influence of the physical environment on organisms has long been a subject of ecological research. But, the complex drivers of environmental variation, and the multiple scales at which this can occur, make studying this topic a difficult challenge. In rocky intertidal habitats, oceanographic- and climate-scale variability influence benthic communities...
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4.7. Mesocosm results showing the influence on Fucus of immersion time (a, c, e,
g) and light
This dissertation focuses on the evolutionary forces of genetic drift and gene flow in frog populations. The balance of these two forces and the force of mutation largely determine the amount of neutral genetic variation within populations as well as the degree of genetic similarity among populations. The stochastic evolutionary...
The influence of loss of diversity on community dynamics and ecosystem functioning has recently received considerable attention. Although study of biodiversity has a long history within ecology, empirical investigations exploring consequences of loss have been rare. Because many factors confound diversity comparisons, experimental manipulations of diversity offer the most direct...
The purpose of this thesis was to determine if an underlying biological cause exists for the exuberant reproductive success in free-roaming unowned (FRU) cats. The hypothesis for this thesis was that FRU tom and queen cats have reproductively adapted to man-made sterilization efforts by lowering the age at which they...
From British Columbia to northern California, coastal giant salamanders (Dicamptodon tenebrosus) are a dominant vertebrate predator in headwater streams. Though widespread, salamander health and abundance levels differ greatly between locations, provoking the question as to what factors may influence this variation and whether habitat features or biotic variables play a...
Emerging infectious diseases are increasing globally and are a threat to human, wildlife, and ecosystem health. The emerging fungal pathogen, Batrachochytrium dendrobatidis (Bd), or amphibian chytrid fungus, is associated with worldwide amphibian population declines and extinctions. Bd has been found on every continent where amphibians exist and has been documented...
The tadpoles of several anuran species with groupforming
larvae are relatively unpalatable to many of
their potential predators. To more fully understand the
role of palatability and its relationship to group
formation as an antipredator defense in anuran amphibian
larvae, I investigated the palatabilities of the larvae
of three species...
Rapid rates of biodiversity loss have supported the notion that Earth is experiencing a sixth major extinction event. The causes of worldwide biodiversity loss are multifaceted and context dependent. One of the most prominent groups experiencing population declines and extinctions are amphibians. Several pathogens and their associated diseases are especially...
Emerging infectious diseases impact both human and wildlife populations. Infectious agents, in particular the aquatic fungus Batrachochytrium dendrobatidis (chytrid), have an influential role in driving global amphibian population declines. The emergence of the chytrid fungus has aspects of both geographic spread as well as climate shifts altering environmental conditions and...
Releasing hatchery reared salmon and steelhead to supplement threatened and endangered populations is a widely used conservation tool. One issue with this strategy is hatchery fish have lower reproductive fitness than wild fish when spawning in the wild. One of the drivers of fitness loss in steelhead is adaptation to...
The objectives of this study were to determine the effects of acupuncture in dairy cows on caruncular matrix metalloproteinase type-2 (MMP2) tissue concentration and enzyme activity at 0, 2, and 4 hours after calving. Immediately after natural calving, a caruncle was obtained from the body of the uterus and flash...
Ecosystems are facing increasing threats from human related activities, such as overfishing, pollution, habitat destruction, species invasions, and diseases, among others. While oceanic islands provide natural laboratories to understand ecological and evolutionary process, they are also particularly vulnerable to these impacts, given their usual isolation from the mainland and the...
The stability of a limpet-dominated community was
assessed in a experiment in which an consumer was
temporarily removed. Compared to unmanipulated plots,
the limpet-exclusion plots developed greater algal
abundance and altered species composition of both algae
and barnacles. The community was not perturbed beyond
its capacity to recover, since the...
To quantify the reproductive behavior of male and female gray-tailed
voles, Microtus canicaudus, under conditions of natural
estrus, sexually experienced pairs were observed in a standardized
behavior test for 10 hours. The total duration of sexual
interactions averaged 223 minutes, which is considerably longer than
previously published reports on microtines....
Hypotheses concerning relative costs of inbreeding and
outbreeding were evaluated for the harpacticoid copepod Tigriopus
californicus, which inhabits high intertidal tidepools. Field
studies indicate high variation in biotic and abiotic parameters
among pools. These findings coupled with previous information
about very low dispersal rates and local adaptations to individual
pools...
Volcanic activity during the Tertiary has long been held
responsible for the deaths and subsequent fossilization of the
vertebrate populations of the John Day region in Oregon. Oreodonts
as plains or savannah dwelling ruminant herbivores, were likely to
have been subject to potential exposure throughout their lifetime
to volcanic debris...
Eggs, larvae and adults of the four subspecies of Hy la regilla
occurring in Oregon as given by Jameson, Mackey and Richmond
(1966) were collected and subjected to salt stress in a series of
graded seawaters.
It was found that in all cases adults were more tolerant than
larvae and...
Recruitment of larvae from the plankton is an important determinant of
community structure in marine systems. In populations of many marine species,
recruitment determines the basic demographic parameters of immigration, emigration,
and reproduction. Moreover, the effect of recruitment as an "ecological subsidy" can
determine the strength of interactions among species...
The earth is undergoing a “biodiversity crisis” characterized by loss of populations, species, genetic diversity, and ecosystem services. Part of this crisis consists of population declines, extinctions, and increased incidence of deformities in amphibians. It is unknown whether deformities contribute to these declines. Many cases of population declines in amphibians...
Foundation species are important components of ecosystems because they provide habitat and ameliorate stressful conditions for residents. This thesis considers the role of surfgrasses (Phyllospadix spp.) as dynamic foundation species on the coast of Oregon in two studies. Chapter 2, which presents an observational survey of two Phyllospadix congeners, investigates...
The multifaceted role of the environment in regulating the structure and dynamics of biological communities has long fascinated ecologists and motivated much debate and research. Now, in a time of accelerated global changes due to human impacts, the need to understand how the environment shapes communities has gained new urgency....
The influence of large-scale processes on natural communities has become one of the central issues of modern ecology. I combined field and laboratory studies to investigate the effects of variation in coastal upwelling on rocky intertidal communities along the central Oregon coast. I examined whether the growth of intertidal barnacles...
Although endothermy is one of the most significant evolutionary developments in the vertebrates, its origins among extinct taxa have traditionally been difficult to determine. Endothermy is primarily an attribute of the "soft anatomy," and its key features, such as complex lungs, elevated blood oxygen carrying capacity and mitochondrial density, do...
The staghorn sculpin Leptocottus armatus is abundant in the
Yaquina Bay estuary on the central Oregon coast and also occurs
offshore in shallow water. A total of 560 L. armatus were collected
at three locations in Yaquina Bay and between 7 and 11 kilometers
offshore in depths of 40 to...
The current generation of scientists will be asked to mitigate climate change, stall biodiversity loss, and protect ecological communities. These are tasks that require a knowledge of both ecological and social systems to be undertaken successfully. Therefore, my dissertation spans the fields of community ecology and social sciences in an...
This dissertation focuses on science relevant to the design and implementation of marine reserves. The chapters explore a range of topics related to among-site variation in population, community, and ecosystem dynamics. My results demonstrate the value and feasibility of integrating this knowledge into more comprehensive conservation and management approaches. While...
The relationship between nutrients and community structure is poorly understood in open-coast habitats. I created a system of artificial tidepools, of identical age and physical dimensions, at two sites that differed in wave exposure, and manipulated nutrient levels and the abundance of herbivores. Using these unique field mesocosms, I explored...
The anemone Anthopleura xanthogrammica varies in color from
bright green to muddy brown. However, individuals found in caves
are white. White specimens of Anthopleura xanthogrammica collected
from dark caves along the Oregon coast were subjected to various
experiments to determine if these cave dwelling animals carried any
cells of the...
Oceanic uptake of rising anthropogenic CO₂ emissions has caused the emergence of ocean acidification as a major threat to marine ecosystems worldwide. Along eastern boundary current systems, seawater is naturally acidified due to coastal upwelling of low pH seawater from depth. Compounded by ocean acidification, upwelling regions are expected to...
Some parasites may modify the behavior of their
hosts. Altered behaviors may: 1) benefit the host in
that they defend against the pathogen, 2) benefit the
pathogen and represent manipulations of the host
response, and 3) benefit neither the host or the
pathogen and simply be a product of the...
I examined the biomechanical factors that influence the sizes of intertidal macroalgae by studying a population of Fucus gardneri at Fogarty Creek Point, OR. I constructed a mathematical model to predict optimal sizes and probabilities of survival for Fucus under conditions of high and low wave exposure. Predicted optimal sizes...
The Mark 0. Hatfield Marine Science Center (HMSC)
public education opportunities include interpretive programs
offered along the Estuary Nature Trail. The purpose of this
study was to determine the effectiveness of three informal
education programs, interpretive signs, a self-guided trail
brochure, and guided naturalist walks, in imparting
information on the...
The causes of the global biodiversity crisis are varied and complex. Anthropogenic threats may act in isolation, or interact additively or synergistically with each other or with natural stressors to affect sensitive taxa. The recent emergence of many infectious diseases in wildlife has brought attention to the role of disease...
The results of my research suggest that tadpoles of the Western
toad (Bufo boreas) and the Cascades frog (Rana cascadae) display an
alarm response to chemicals from injured conspecific tadpoles.
Furthermore, results suggest that the Bufo boreas alarm response can
be elicited by a natural predator when it feeds on...
Many organisms with complex life cycles undergo transition periods associated with increased vulnerability to predation. Several evolutionary adaptations have been proposed as antipredator defenses for organisms during risky transition periods. These include: shortening of the transition period, parental care, cryptic coloration, and synchrony of risky transitions with large numbers of...
Inferences regarding the biology of extinct taxa are often founded primarily
on cladistically-based phylogenetic hypotheses. However, these inferences are
frequently inconsistent with the morphology and physiology of modern animals. I
suggest that reference to the biology of modern animals might be a more
appropriate tool to aid in the reconstruction...
Winters in north-temperate climates impose high
thermogenic demands upon small birds which are met by
seasonal acclimatization. This thesis investigates the
extent and mechanisms of seasonal acclimatization in darkeyed
juncos (Junco hyemalis) inhabiting western Oregon.
Although insulation is significantly increased in
winter, acclimatization is primarily metabolic. Increased
metabolism is required...
The feeding ecology of a common temperate mesoherbivore, the oligophagous sea slug Placida dendritica (Gastropoda: Opisthobranchia: Ascoglossa), was examined from April 1985 to June 1989. Along the central coast of Oregon, Placida consumed three host species: the low intertidal green algae Codium setchellii, C. fragile, and Bryopsis corticulans. Individual slugs...
Previous observations of light levels and phytoplankton abundances along the Oregon coast demonstrated that phytoplankton attenuated light sufficiently to potentially limit the growth of intertidal macrophytes and therefore structure local intertidal communities. Inspired by this observation, in spring 2004, I initiated a study to quantify the direct and indirect benthic...
This thesis tests the hypothesis that innate immunity may be enhanced
immediately following a stressful event. The experiments characterize the acute
effects of the fight or flight response on some immunological and endocrine
parameters in rainbow trout (Oncorhynchus mykiss). Plasma cortisol and
catecholamines were elevated within seconds of the initiation...
In the past decade, declines in amphibian populations have captured scientific and popular interest. The causes of the declines are likely to be complex and involve interactions between several environmental stressors. Using multifactorial experiments, I investigated the combined effects of several anthropogenic stressors on developing amphibians in Oregon, USA. In...
Many marine fish populations are severely declining due to over-fishing, loss of both juvenile and adult habitats, and accelerating environmental degradation. Fisheries management and the implementation of marine protected areas (MPAs) and other conservation tools are currently hindered by large gaps in knowledge about larval dispersal and its subsequent effects...
Understanding the dynamics of open marine populations is difficult. Ecological processes may vary with the spatial structure of the habitat, and this variation may subsequently affect demographic rates. In a series of observational and experimental studies in the Bahamas, I examined the roles of emigration, mortality, and predation in the...
The syllid polychaete Autolytus varius reproduces in the spring
and early summer in Yaquina Bay, Oregon, The fertilized female
epitokes, or Sacconereis, carry the developing eggs and larvae in a
ventral sac until the larvae are ready to be released; incubation
lasts 14 to 18 days in the laboratory, The...
In a comparison of the mammalian and fish immune systems many similarities and differences are found. While most of the differences occur in the acquired or lymphoid arm of immunity, the nonlymphoid immune systems of fish and mammals share many similarities. For instance, both animal groups use phagocytic neutrophils and...
Ecologists must increasingly balance the need for accurate predictions about how ecosystems will be affected by climate change, against the fact that making such predictions at the ecosystem-level may be infeasible. Although information about responses of individual species to a changing environment is increasing, scaling such information to the community...
Gradients of physical disturbance are central to
theories of community organization yet rarely are studies
performed in which physical factors are experimentally
manipulated. Pothole tidepool algal communities exhibit
distinct zonation patterns from top to bottom that result
from scouring by rocks and other debris in the pools.
Scouring is easily...
This dissertation focuses on the importance of pelagic subsidies in the Northeast Pacific to rocky shore community regulation. My results document the patterns of pelagic subsidy supply, determine if those subsidies are correlated with community structure, and examine if community regulation differs between areas of high- and low-subsidies. Understanding how...
As ecologists are being called upon to predict the consequences of human
perturbations to natural communities, an important goal is to understand what factors
drive variability or consistency in nature.
In the rocky intertidal of San Juan Island, Washington, a comparative
experimental approach was used to investigate spatial and temporal...
Earthworms are capable of osmotic and ionic regulation while
living in a dilute balanced salt solution. When transferred from soil
to pond-water (PW) their body weight increases by 15 percent due to
a net uptake of water.
This results in an initial dilution of the
coelomic fluid (CF).
Subsequently, Na...
Clinocardium nuttallii from Yaquina Bay, Oregon, were found to
harbor an algal symbiont in the siphon, mantle and occasionally
the foot tissues. Approximately 35 percent of the population in the
study area was infected to some degree with the alga; however, no
cockles under two years of age were infected....
An investigation of the correlation between a number of behavioral,
morphological and physiological parameters and dominance status of male
Ring-necked Pheasants (Phasianus colchicus) was undertaken. Dominant
males performed significantly more aggressive behaviors than
subordinates and a higher proportion of these behaviors was directed
toward distantly ranked subordinates. Animals could also...
To assess the context dependence of kin discriminating
behavior, I examined kin-biased aggregation behavior in tadpoles
of R. cascadae in different ecological conditions. I manipulated food
distribution, predator presence, thermal heterogeneity, and
relatedness in a multifactorial mesocosm experiment. All four
factors interacted to influence tadpole dispersion. My results
suggest that...
Understanding how large-scale processes (>100 kms) influence ecological communities is currently a major focus in ecology. In marine systems, coastal upwelling, a large-scale oceanographic process in which surface water pushed offshore by winds is replaced by cold, nutrient-rich water from depth, appears to cause variation in rocky intertidal communities. Along...
The host fish for this study were collected from January
through June of 1965. Tidepools were selected at Bar View, Cape
Arago, Neptune State Park, Seal Rock, and Yaquina Head. Of the
187 fish examined, 132 were infected. The following host fishes
yielded the following parasites. New Host records are...
Most climate change predictions focus on the response of individual species to changing local conditions and ignore species interactions, largely due to the lack of a sound theoretical foundation for how interactions are expected to change with climate and how to incorporate them into climate change models. Much of the...
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Appendix E – Temporal trends in the annual mean and intra-annual distribution of
upwelling
The life cycle of a monogenean, Diclidophora sp., was studied
with special attention to the time required for developmental stages
to occur. Eggs are produced by adult worms at the rate of one every
13.5 minutes and require 32 days to hatch when incubated at 12.5°C
and 30.9‰ salinity. Rate...
My thesis explored the effects of and potential mediating mechanisms for an important environmental stressor, ultraviolet-B (UVB) radiation. UVB radiation has negative effects on organisms in both terrestrial and aquatic systems. I used meta-analysis to quantify the effects of UVB radiation on a diversity of aquatic organisms (Chapter 2). UVB...
The high productivity of Eastern Boundary Upwelling Ecosystems (EBUE), some of the most productive ecosystems in the globe, is attributed to the nutrient rich waters brought up through upwelling. Climate change scenarios for coastal upwelling systems, predict an intensification of coastal upwelling winds. Associated with intensification in upwelling are biogeochemical...
I studied the feeding behavior of marked individuals of the
carnivorous marine snail Thais melones in a rocky shore habitat of
Pacific Panama. The population of snails consume a variety of
invertebrate species such as bivalves, limpets, and polychaetes.
Individuals exhibited a range of diet breadth, with some
specialized, but...
Ultraviolet-B radiation (UVB) is an abiotic stressor in both terrestrial and aquatic systems. The stratospheric ozone layer, depleted due to anthropogenic activities and the cause of elevated UVB at earth's surface over the last four decades, is predicted to recover by 2065. However, UVB levels in aquatic systems may continue...
Plethodontid salamanders have served as an informative vertebrate system for studying the role of chemical signals in facilitating social and reproductive behaviors. Individuals produce complex mixtures of chemicals from multiple glandular regions. In total, these secretions convey a wide variety of information, and are important for numerous inter- and intraspecific...
Predator-prey interactions have historically been studied to explain patterns of organization observed in populations and communities. They have also been important in understanding the evolution of antipredator responses in prey and counterstrategies in predators. Despite the breadth of knowledge that exists for heterospecific interactions, relatively few studies have investigated the...
Population genetic structure is widespread in many organisms and can be found at small spatial scales. Fine-scale differentiation is the result of ecological and evolutionary processes working together to produce an overall pattern, but the relative importance of these factors in population differentiation is poorly understood. The goals of my...
Understanding the mechanisms that regulate local species diversity and community structure is a perennial goal of ecology. Local community structure can be viewed as the result of numerous local and regional processes; these processes act as filters that reduce the regional species pool down to the observed local community. In...
Aspects of the life history and ecology of the intertidal turf-forming
alga Rhodomela larix (Turner) C. Agardh were examined over a two
year period at several sites on the Oregon coast. Rhodomela occurred
over a broad tidal range and exhibited different growth and morphology
characteristics with respect to tidal height....
Rockfish of the genus Sebastes are important components of Oregon reef communities. I examined patterns of age and growth in young-of-year rockfish across two nested spatial scales – local and regional – along the Oregon coast. Using otolith microstructural examination, I examined the relative importance of local versus regional factors...