We explore the application of deep learning to the disparate fields of natural language processing and computational biology. Both the sentences uttered by humans as well as the RNA and protein sequences found within the cells of their bodies can be considered formal languages in computer science, as sets of...
Machine learning (ML) and deep learning (DL) models impact our daily lives with applications in natural language modeling, image analysis, healthcare, genomics, and bioinformatics. The exponential growth of biological sequence data necessitates accompanying advances in computational methods. Although deep learning is highly effective for detecting and classifying biological sequences, challenges...
Information about named entities (real-world objects) is usually harvested from different sources and organized as a multiple relational directed graph in Knowledge Bases (KBs). KBs play essential roles in many NLP modules including question answering, fact-checking, search engines, etc. KBs are big but still incomplete: relational information among entities is...
There are more than 87,000 chemicals in current use with little to no toxicity information available. Assessing such a large number of chemicals using traditional methods would take an unreasonable amount of time and money, and require the use a large number of animals. The incorporation of high-throughput in vivo...
Professional development is a critical part of education, especially in career and technical education (CTE). CTE programs have rapidly changing technological foundations, and while the CTE teachers' primary focus is to prepare students for entry-level positions in their occupational areas, CTE teachers are also required to embed academics into their...
The aryl hydrocarbon receptor (AHR) is a ligand activated transcription factor that is a member of the basic helix-loop-helix PER-ARNT-SIM (bHLH/PAS) protein family of cellular sensors. The AHR is conserved across multiple animal phyla and is required for proper vertebrate development. A structurally diverse group of chemicals, including polycyclic aromatic...
Despite more than two centuries of exploration, including more than six million deep wellbores with depths exceeding 40,000 feet in some parts of the world, our ability to constrain subsurface processes and properties remains limited. Characteristics of the subsurface vary and can be analyzed on a variety of spatial scales....
One of the most common practices regarding estimation of forest attributes is
the partitioning of large forested subpopulations into smaller areas of interest to
coincide with specific objectives of present and future forest management. New
estimators are needed to improve estimation of selected forest attributes in small areas
where the...
The purpose of this study was to learn about the experiences of Generation 1.5 Hispanics in developmental English in community college. A qualitative comparative case study design was used for this social critical study. The key findings fell into three categories: road blocks, motivators, and actions. The road blocks included:...
Coastal multi-hazards, i.e., earthquakes followed by tsunamis, induce severe damage to coastal infrastructure. The multi-hazards can cause soil liquefaction, which is one of the major concerns for evaluating sediments transport potential and structure failure mechanisms. The objectives for this work is threefold. First, to build and validate a soil numerical...