Most carbon (C) transformations in soil are carried out by a diverse and complex soil microbial community. The size and composition of the soil microbial community is determined by poorly understood interactions between the quantity and chemical composition of plant inputs, as well as climate. Given the metabolic diversity of...
Burkholderia cepacia complex (Bcc) bacteria reside in soil, plant rhizospheres, and water, but the prevalence of Bcc in outdoor environments is not clear. In this study, we sampled a variety of soil and rhizosphere environments with which people may have contact: playgrounds, athletic fields, parks, hiking trails, residential yards and...
In horticultural nurseries for container-grown plants, production and sales have been threatened by the presence of a quarantined plant pathogen, Phytophthora ramorum (causal agent of sudden oak death). Infested nursery beds are an important source of P. ramorum, which can initiate disease through movement with surface water to infect roots...
ABSTRACT
Wetlands are considered critically important in the delivery of ecosystem services such as water quality improvement, flood protection, and conservation of native biodiversity. A common measure of the effectiveness of these ecosystem services is denitrification, an anaerobic microbial process that converts nitrate (NO3-), a common water pollutant, into dinitrogen...
Nitrogen incorporation from red alder (Alnus rubra Bong.) into an Oregon upland mesic forest soil was studied by tracing the fate of 15N added as 15N-labeled alder leaf litter. The recovery of 15N in vegetation, litter, light- and heavy-fractions of the soil, the chloroform-labile (microbial biomass) pool, and the whole...
Although ammonia-oxidizing archaea (AOA) and bacteria (AOB) coexist in most non-acidic agricultural soils, the factors that influence their relative contributions to soil nitrification activity remain unclear. A 2- to 4-d whole soil microcosm assay was developed, utilizing the aliphatic C₈ alkyne 1-octyne to inactivate AOB-driven nitrification activity without impacting AOA...
Proteinaceous compounds are abundant forms of organic nitrogen in soil and aquatic ecosystems, and the rate of protein depolymerization, which is accomplished by a diverse range of microbial secreted peptidases, often limits nitrogen turnover in the environment. To determine if the distribution of secreted peptidases reflects the ecological and evolutionary...
The use of smart tracers to study hydrologic systems is becoming more widespread. Smart tracers are compounds that irreversibly react in the presence of a process or condition under investigation. Resazurin (Raz) is a smart tracer that undergoes an irreversible reduction to resorufin (Rru) in the presence of cellular metabolic...
Seasonality is defined as a change in mood and behavior with the seasons. Research shows there is a possible connection between vitamin D levels and mood (Murphy & Wagner, 2008; Lansdowne & Provost, 1998). Given that vitamin D is produced when skin is exposed to sunlight and varies with sun...
Use of high-strength steel (HSS) reinforcing bars could provide constructability and economic benefits for the construction of structures, reducing the initial and ultimately the life-cycle cost of bridge and building structural elements. This thesis summarizes work performed in a research project on the use of HSS reinforcing bars for concrete...