Index Catalog // ScholarsArchive@OSU

Genetic Connectivity of Dungeness Crab (Cancer magister) in the California Current System and Puget Sound

Creator:: Jackson, Tyler M.
Abstract:: Understanding connectivity among exploited populations is critical to their sustainable management and long-term viability. In the marine environment, estimates of connectivity often rely on the use of genetic markers, as dispersal primarily occurs during a planktonic larval phase which is difficult to track using direct methods. In this thesis, we...
Resource Type:: Masters Thesis
Full Text:: Abstract approved: ______________________________________________________ Kathleen G. O’Malley

Big Fishery, Big Data, and Little Crabs: Using a Genomic Approach to Examine Larval Recruitment Patterns of Dungeness Crab (Cancer magister) in the California Current Ecosystem

Creator:: Lee, Elizabeth M. J.
Abstract:: The California Current Ecosystem (CCE) is a dynamic marine ecosystem from which many socioeconomically important fisheries species are harvested. In this thesis, a genotyping-by-sequencing (GBS) approach was used to examine genomic variation in an early life stage of the Dungeness crab (Cancer magister), which constitutes the most valuable single-species commercial...
Resource Type:: Masters Thesis
Full Text:: Kathleen G. O’Malley The California Current Ecosystem (CCE) is a dynamic marine ecosystem from

Characterizing Fine-Scale Neutral and Adaptive Genetic Diversity of Oncorhynchus mykiss in the Klamath Basin Before Dam Removal

Creator:: Piotrowski, Stanley J.
Abstract:: An inextricable link exists between dams and human development in the Pacific Northwest, but they can fragment rivers and reduce genetic connectivity for freshwater and anadromous fishes. Since the early-twentieth century, a series of hydropower and irrigation dams on the mainstem Klamath River, California, has fragmented migratory corridors and eliminated...
Resource Type:: Masters Thesis
Full Text:: Kathleen G. O’Malley An inextricable link exists between dams and human development in the Pacific

Mate choice of wild spawning coho salmon (Oncorhynchus kisutch) in the Umpqua River, Oregon

Creator:: Whitcomb, Amelia C.
Abstract:: Evidence for reduced reproductive success (RS) of wild spawning hatchery-reared fish invites serious consideration with regard to the detrimental effects on subsequent generations of wild populations. Mate choice was evaluated as a potential mechanism contributing to these observed RS differences using a previous pedigree of wild spawning hatchery-reared and wild...
Resource Type:: Masters Thesis
Full Text:: : Michael A. Banks Kathleen G. O’Malley Evidence for reduced reproductive success (RS) of wild spawning

Use of Landscape Characteristics to Quantify Hybridization Risk Between Native and Introduced Salmonids

Creator:: Manning, Michael A.
Abstract:: The introduction of non-native species can negatively impact native species through reduced genetic fitness resulting from hybridization. The lack of spatiotemporal data of hybrids occurrences makes assessing hybridization risk difficult. Here, I developed a spatially-explicit GIS Hybridization Risk Model (HRM) between native ESA-listed Bull Trout and introduced Brook Trout by...
Resource Type:: Masters Thesis
Full Text:: documented hybridization with native northern flying squirrel (G. sabrinus) populations (Garroway et al

An investigation into the genetic basis of migration timing in Chinook salmon (Oncorhynchus tshawytscha)

Creator:: O'Malley, Kathleen G.
Abstract:: The genetic basis of adaptation is complex as many fitness-related traits are quantitative and likely influenced by multiple genes with variable effects across different selective environments. One important adaptation for anadromous Chinook salmon (Oncorhynchus tshawytscha) is the time at which individuals return to natal breeding sites within a reproductive season....
Resource Type:: Dissertation
Full Text:: Kathleen G. O’Malley for the degree of Doctor of Philosophy in Fisheries Science presented on October 16

Evaluating the population genetic structure of Dungeness crab (Cancer magister) off the Oregon coast

Creator:: O'Malley, Kathleen and Roegner, Curtis
Abstract:: Despite the high economic and social value of Dungeness crab, no stock assessment work has been conducted on coastal Dungeness crab populations in Oregon. The fishery is currently managed based on a sex, size, and season strategy (e.g. males of a minimum size fished during specified months). It is estimated...
Resource Type:: Technical Report
Full Text:: coastcoasthis is the Area for the Title of the Report Prepared by Kathleen O’Malley, Oregon State

Big fishery, big data, and little crabs: Using genomic methods to examine the seasonal recruitment patterns of early life stage Dungeness crab (Cancer magister) in the California Current Ecosystem

Creator:: Lee, Elizabeth M. J. and O'Malley, Kathleen G.
Abstract:: The California Current Ecosystem (CCE) is a dynamic marine ecosystem from which many socioeconomically important fisheries species are harvested. Here, a genotyping- by-sequencing (GBS) approach was used to examine genomic variation in an early life stage (megalopae) of the Dungeness crab (Cancer magister), which constitutes the most valuable single-species commercial...
Resource Type:: Article
Full Text:: elizabethmjlee@gmail.com †ORCID: Elizabeth M. J. Lee orcid.org/0000-0003-3412-1591 Kathleen G. O’Malley

A latitudinal cline in the Chinook salmon (Oncorhynchus tshawytscha) Clock gene: evidence for selection on PolyQ length variants

Creator:: O'Malley, Kathleen G. and Banks, Michael A.
Abstract:: A critical seasonal event for anadromous Chinook salmon (Oncorhynchus tshawytscha) is the time at which adults migrate from the ocean to breed in freshwater. We investigated whether allelic variation at the circadian rhythm genes, OtsClock1a and OtsClock1b, underlies genetic control of migration timing among 42 populations in North America. We...
Resource Type:: Article
Full Text:: ) Clock gene: evidence for selection on PolyQ length variants Kathleen G. O’Malley* and Michael A. Banks

Fine-scale spatial and temporal genomic variation among Dungeness crab Cancer magister larval recruits in the California Current Ecosystem

Creator:: Lee, Elizabeth M. J. and O'Malley, Kathleen G.
Abstract:: Dynamic marine environments can shape complex spatial and temporal patterns in the population connectivity of marine species, and this is often exemplified in species with long larval phases. Here, we used a genotyping-by-sequencing (GBS) approach to examine fine-scale spatial and temporal genomic variation among Dungeness crab Cancer magister larval recruits...
Resource Type:: Article
Full Text:: *, Kathleen G. O’Malley State Fisheries Genomics Lab, Coastal Oregon Marine Experiment Station, Department of

ScholarsArchive@OSU

Genetic Connectivity of Dungeness Crab (Cancer magister) in the California Current System and Puget Sound

Big Fishery, Big Data, and Little Crabs: Using a Genomic Approach to Examine Larval Recruitment Patterns of Dungeness Crab (Cancer magister) in the California Current Ecosystem

Characterizing Fine-Scale Neutral and Adaptive Genetic Diversity of Oncorhynchus mykiss in the Klamath Basin Before Dam Removal

Mate choice of wild spawning coho salmon (Oncorhynchus kisutch) in the Umpqua River, Oregon

Use of Landscape Characteristics to Quantify Hybridization Risk Between Native and Introduced Salmonids

An investigation into the genetic basis of migration timing in Chinook salmon (Oncorhynchus tshawytscha)

Evaluating the population genetic structure of Dungeness crab (Cancer magister) off the Oregon coast

Big fishery, big data, and little crabs: Using genomic methods to examine the seasonal recruitment patterns of early life stage Dungeness crab (Cancer magister) in the California Current Ecosystem

A latitudinal cline in the Chinook salmon (Oncorhynchus tshawytscha) Clock gene: evidence for selection on PolyQ length variants

Fine-scale spatial and temporal genomic variation among Dungeness crab Cancer magister larval recruits in the California Current Ecosystem

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