Index Catalog // ScholarsArchive@OSU

Willamette Water 2100 Forest Elevational Snow Transect (ForEST) Project

Creator:: Roth, Travis R. and Nolin, Anne W.
Abstract:: The Forest Elevation Snow Transect (ForEST) project is a paired site elevational snow study. It is designed to measure how snow accumulates and ablates under different forest structures across an elevation range. The ForEST project has been ongoing since the winter of 2011-2012 within the McKenzie River Basin of the...
Resource Type:: Dataset

Practical considerations for enhanced-resolution coil-wrapped distributed temperature sensing

Creator:: Hilgersom, Koen, van Emmerik, Tim, Solcerova, Anna, Berghuijs, Wouter, Selker, John, and van de Giesen, Nick
Abstract:: Fibre optic distributed temperature sensing (DTS) is widely applied in Earth sciences. Many applications require a spatial resolution higher than that provided by the DTS instrument. Measurements at these higher resolutions can be achieved with a fibre optic cable helically wrapped on a cylinder. The effect of the probe construction,...
Resource Type:: Article
Full Text:: temperature sensing Koen Hilgersom1, Tim van Emmerik1, Anna Solcerova1, Wouter Berghuijs2, John Selker3, and

What the Inbred Scandinavian Wolf Population Tells Us about the Nature of Conservation

Creator:: Räikkönen, Jannikke, Vucetich, John A., Vucetich, Leah M., Peterson, Rolf O., and Nelson, Michael P.
Abstract:: The genetic aspects of population health are critical, but frequently difficult to assess. Of concern has been the genetic constitution of Scandinavian wolves (Canis lupus), which represent an important case in conservation. We examined the incidence of different congenital anomalies for 171 Scandinavian wolves, including the immigrant founder female, born...
Resource Type:: Article
Full Text:: Tells Us about the Nature of Conservation Jannikke Räikkönen1*, John A. Vucetich2, Leah M. Vucetich2

Circadian Regulation of Glutathione Levels and Biosynthesis in Drosophila melanogaster

Creator:: Beaver, Laura M., Klichko, Vladimir I., Chow, Eileen S., Kotwica-Rolinska, Joanna, Williamson, Marisa, Orr, William C., Radyuk, Svetlana N., and Giebultowicz, Jadwiga M.
Abstract:: Circadian clocks generate daily rhythms in neuronal, physiological, and metabolic functions. Previous studies in mammals reported daily fluctuations in levels of the major endogenous antioxidant, glutathione (GSH), but the molecular mechanisms that govern such fluctuations remained unknown. To address this question, we used the model species Drosophila, which has a...
Resource Type:: Article
Full Text:: and Biosynthesis in Drosophila melanogaster Laura M. Beaver1¤a, Vladimir I. Klichko2, Eileen S. Chow1

Two new combinations in Euploca Nutt. (Heliotropiaceae, Boraginales) and a conspectus of the species of the Guiana Shield area

Creator:: Feuillet, Christian
Abstract:: Heliotropium foliatum and Tournefortia humilis are transferred to Euploca Nutt. respectively as Euploca foliata comb. n. and Euploca humilis comb. n. A collection from Guyana has been recently identified as Euploca humistrata, a species previously considered a Brazilian endemic. A collection from French Guiana documents for the first time the...
Resource Type:: Article
Full Text:: 1998, pg. 235: P! [scan!]; isotypes K!, M n.v., MPU!, P! [scan!]). Heliotropium littorale Mart. ex

Frequent Alteration of the Tumor Suppressor Gene APC in Sporadic Canine Colorectal Tumors

Creator:: Youmans, Lydia, Taylor, Cynthia, Shin, Edwin, Harrell, Adrienne, Ellis, Angela E., Seguin, Bernard, Ji, Xinglai, and Zhao, Shaying
Abstract:: Sporadic canine colorectal cancers (CRCs) should make excellent models for studying the corresponding human cancers. To molecularly characterize canine CRC, we investigated exonic sequence mutations of adenomatous polyposis coli (APC), the best known tumor suppressor gene of human CRC, in 23 sporadic canine colorectal tumors, including 8 adenomas and 15...
Resource Type:: Article
Full Text:: Teacher of Yunnan University (PI: Ji); the NCI P50 CA128613 (PI: Dr. Dong M. Shin) and GM085354 (PI: Dr

Simulated Evolution of Protein-Protein Interaction Networks with Realistic Topology

Creator:: Peterson, G. Jack, Pressé, Steve, Peterson, Kristin S., and Dill, Ken A.
Abstract:: We model the evolution of eukaryotic protein-protein interaction (PPI) networks. In our model, PPI networks evolve by two known biological mechanisms: (1) Gene duplication, which is followed by rapid diversification of duplicate interactions. (2) Neofunctionalization, in which a mutation leads to a new interaction with some other protein. Since many...
Resource Type:: Article
Full Text:: selection. In our model, NE mutations occur at a rate m, which is assumed to be constant. All proteins are

Adaptive genetic markers discriminate migratory runs of Chinook salmon (Oncorhynchus tshawytscha) amid continued gene flow

Creator:: O'Malley, Kathleen G., Jacobson, Dave P., Kurth, Ryon, Dill, Allen J., and Banks, Michael A.
Abstract:: Neutral genetic markers are routinely used to define distinct units within species that warrant discrete management. Human-induced changes to gene flow however may reduce the power of such an approach. We tested the efficiency of adaptive versus neutral genetic markers in differentiating temporally divergent migratory runs of Chinook salmon (Oncorhynchus...
Resource Type:: Article
Full Text:: . We are grateful to Anna Kastner, the Feather River Hatchery Manager, for her support to this

Malonate Inhibits Virulence Gene Expression in Vibrio cholerae

Creator:: Minato, Yusuke, Fassio, Sara R., and Häse, Claudia C.
Abstract:: We previously found that inhibition of the TCA cycle, either through mutations or chemical inhibition, increased toxT transcription in Vibrio cholerae. In this study, we found that the addition of malonate, an inhibitor of succinate dehydrogenase (SDH), decreased toxT transcription in V. cholerae, an observation inconsistent with the previous pattern...
Resource Type:: Article
Full Text:: gene regulator in Vibrio cholerae. Microbiology (in press). 13. Iwanaga M, Kuyyakanond T (1987) Large

Assessing De Novo transcriptome assembly metrics for consistency and utility

Creator:: O’Neil, Shawn T. and Emrich, Scott J.
Abstract:: Background: Transcriptome sequencing and assembly represent a great resource for the study of non-model species, and many metrics have been used to evaluate and compare these assemblies. Unfortunately, it is still unclear which of these metrics accurately reflect assembly quality. Results: We simulated sequencing transcripts of Drosophila melanogaster. By assembling...
Resource Type:: Article

ScholarsArchive@OSU

Willamette Water 2100 Forest Elevational Snow Transect (ForEST) Project

Practical considerations for enhanced-resolution coil-wrapped distributed temperature sensing

What the Inbred Scandinavian Wolf Population Tells Us about the Nature of Conservation

Circadian Regulation of Glutathione Levels and Biosynthesis in Drosophila melanogaster

Two new combinations in Euploca Nutt. (Heliotropiaceae, Boraginales) and a conspectus of the species of the Guiana Shield area

Frequent Alteration of the Tumor Suppressor Gene APC in Sporadic Canine Colorectal Tumors

Simulated Evolution of Protein-Protein Interaction Networks with Realistic Topology

Adaptive genetic markers discriminate migratory runs of Chinook salmon (Oncorhynchus tshawytscha) amid continued gene flow

Malonate Inhibits Virulence Gene Expression in Vibrio cholerae

Assessing De Novo transcriptome assembly metrics for consistency and utility

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