Index Catalog // ScholarsArchive@OSU

Evaluation and improvement of the Community Land Model (CLM4) in Oregon forests

Creator:: Hudiburg, T. W., Law, B. E., and Thornton, P. E.
Abstract:: Ecosystem process models are important tools for determining the interactive effects of global change and disturbance on forest carbon dynamics. Here we evaluated and improved terrestrial carbon cycling simulated by the Community Land Model (CLM4), the land model portion of the Community Earth System Model (CESM1.0.4). Our analysis was conducted...
Resource Type:: Article
Full Text:: Evaluation and improvement of the Community Land Model (CLM4) in Oregon forests T. W. Hudiburg1, B. E. Law2

A Multi-Year Longitudinal Study of Water Quality Parameters in Four Salmon-Bearing and Recreational Streams on Mount Hood, Oregon

Creator:: Wasowski, Ronald, Alexander, David, Kolmes, Steven, Banet, Nathan, Card, Amy, Haines, Morgan, Kolmes, Elijah, Northcutt, Kelly, Roemer, Derek, and Webber, Sarah
Abstract:: Four streams-Clear Fork, Lost Creek, Camp Creek and Still Creek-in northwestern Oregon's Sandy River Basin were monitored for temperature, dissolved oxygen levels, and fecal bacterial concentrations in a multi-year analysis examining stream health for recreational users and anchor habitat for Pacific Salmon. Temperatures were recorded using micro -T temperature loggers...
Resource Type:: Article
Full Text:: , Lost Creek, Camp Creek and Still Creek–in northwestern Oregon’s Sandy River Basin were monitored for

How Effective Are DNA Barcodes in the Identification of African Rainforest Trees?

Creator:: Parmentier, Ingrid, Duminil, Jérôme, Kuzmina, Maria, Philippe, Morgane, Thomas, Duncan W., Kenfack, David, Chuyong, George B., Cruaud, Corinne, and Hardy, Olivier J.
Abstract:: Background: DNA barcoding of rain forest trees could potentially help biologists identify species and discover new ones. However, DNA barcodes cannot always distinguish between closely related species, and the size and completeness of barcode databases are key parameters for their successful application. We test the ability of rbcL, matK and...
Resource Type:: Article
Full Text:: Philippe1, Duncan W. Thomas4, David Kenfack5, George B. Chuyong6, Corinne Cruaud7, Olivier J. Hardy1* 1

Catching the Right Wave: Evaluating Wave Energy Resources and Potential Compatibility with Existing Marine and Coastal Uses

Creator:: Kim, Choong-Ki, Toft, Jodie E., Papenfus, Michael, Verutes, Gregory, Guerry, Anne D., Ruckelshaus, Marry H., Arkema, Katie K., Guannel, Gregory, Wood, Spencer A., Bernhardt, Joanna R., Tallis, Heather, Plummer, Mark L., Halpern, Benjamin S., Pinsky, Malin L., Beck, Michael W., Chan, Francis, Chan, Kai M. A., Levin, Phil S., and Polasky, Stephen
Abstract:: Many hope that ocean waves will be a source for clean, safe, reliable and affordable energy, yet wave energy conversion facilities may affect marine ecosystems through a variety of mechanisms, including competition with other human uses. We developed a decision-support tool to assist siting wave energy facilities, which allows the...
Resource Type:: Article
Full Text:: , Benjamin S. Halpern6, Malin L. Pinsky7, Michael W. Beck8, Francis Chan9, Kai M. A. Chan10, Phil S. Levin5

Status of the European Green Crab in Oregon and Washington Estuaries Final Report November 2006

Creator:: Yamada, Sylvia Behrens and Randall, Andrea
Abstract:: Prepared for Aquatic Nuisance Species Project, Pacific States Marine Fisheries Commission.
Resource Type:: Technical Report
Full Text:: for trapping help in Oregon estuaries. We are grateful to Harry and Annette’s Seafood for

Regulation of Motility of Myogenic Cells in Filling Limb Muscle Anlagen by Pitx2

Creator:: Campbell, Adam L., Shih, Hung-Ping, Xu, Jun, Gross, Michael K., and Kioussi, Chrissa
Abstract:: Cells of the ventrolateral dermomyotome delaminate and migrate into the limb buds where they give rise to all muscles of the limbs. The migratory cells proliferate and form myoblasts, which withdraw from the cell cycle to become terminally differentiated myocytes. The myogenic lineage colonizes pre-patterned regions to form muscle anlagen...
Resource Type:: Article
Full Text:: ) was used to purify the EGFP+ (G) and EGFP2 (W) cells from pools of 3–4 sets of forelimbs of MUT, HET

Proteins Secreted via the Type II Secretion System: Smart Strategies of Vibrio cholerae to Maintain Fitness in Different Ecological Niches

Creator:: Sikora, Aleksandra E.
Abstract:: Many Gram-negative bacteria use the type II secretion (T2S) pathway to deliver proteins that contribute to disease in humans, animals, and plants. Vibrio cholerae, the causative agent of the life-threatening diarrheal disease cholera, utilizes the T2S system for translocation of at least 19 proteins, including the large hexameric protein cholera...
Resource Type:: Article
Full Text:: , which raises the levels of cAMP and induces the Cl2 secretory response, followed by flow of Cl2 and

Regional variation in stand structure and development in forests of Oregon, Washington, and inland Northern California

Creator:: Reilly, Matthew J. and Spies, Thomas A.
Abstract:: Despite its importance to biodiversity and ecosystem function, patterns and drivers of regional scale variation in forest structure and development are poorly understood. We characterize structural variation, create a hierarchical classification of forest structure, and develop an empirically based framework for conceptualizing structural development from 11,091 plots across 25 million...
Resource Type:: Article
Full Text:: Potential developmental pathways Vegetation zone Evidence (1.1) Very Low Live Biomass and Density w/ Very

Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations

Creator:: Bollmann, Annette, Sedlacek, Christopher J., Norton, Jeanette, Laanbroek, Hendrikus J., Suwa, Yuichi, Stein, Lisa Y., Klotz, Martin G., Arp, Daniel J., Sayavedra-Soto, Luis, Lu, Megan, Bruce, David, Detter, Chris, Tapia, Roxanne, Han, James, Woyke, Tanja, Pitluck, Sam, Pennacchio, Len, Nolan, Matt, Land, Miriam L., Huntemann, Marcel, Deshpande, Shweta, Han, Cliff, Chen, Amy, Kyrpides, Nikos, Movromatis, Konstantinos, Markowitz, Victor, Szeto, Ernest, Ivonova, Natalia, Mikhailova, Natalia, Pagani, Ioanna, Pati, Amrita, Peters, Lin, Ovchinnikova, Galina, Goodwin, Lynne A., and Lucas, Susan M.
Abstract:: Nitrosomonas sp. Is79 is a chemolithoautotrophic ammonia-oxidizing bacterium that belongs to the family Nitrosomonadaceae within the phylum Proteobacteria. Ammonia oxidation is the first step of nitrification, an important process in the global nitrogen cycle ultimately resulting in the production of nitrate. Nitrosomonas sp. Is79 is an ammonia oxidizer of high...
Resource Type:: Article
Full Text:: Cytoskeleton W 0 0.00 Extracellular structures U 87 3.30 Intracellular trafficking, secretion, and

A first chronology for the North Greenland Eemian Ice Drilling (NEEM) ice core

Creator:: Rasmussen, S. O., Abbott, P. M., Blunier, T., Bourne, A. J., Brook, Edward J., Buchardt, S. L., Buizert, Christo, Chappellaz, J., Clausen, H. B., Cook, E., Dahl-Jensen, D., Davies, S. M., Guillevic, M., Kipfstuhl, S., Laepple, T., Seierstad, I. K., Severinghaus, J. P., Steffensen, J. P., Stowasser, C., Svensson, A., Vallelonga, P., Vinther, B. M., Wilhelms, F., and Winstrup, M.
Abstract:: A stratigraphy-based chronology for the North Greenland Eemian Ice Drilling (NEEM) ice core has been derived by transferring the annual layer counted Greenland Ice Core Chronology 2005 (GICC05) and its model extension (GICC05modelext) from the NGRIP core to the NEEM core using 787 match points of mainly volcanic origin identified...
Resource Type:: Article
Full Text:: core was drilled during 2008–2010 through the ice sheet in Northwest Greenland (77.45◦ N, 51.07◦ W, sur

ScholarsArchive@OSU

Evaluation and improvement of the Community Land Model (CLM4) in Oregon forests

A Multi-Year Longitudinal Study of Water Quality Parameters in Four Salmon-Bearing and Recreational Streams on Mount Hood, Oregon

How Effective Are DNA Barcodes in the Identification of African Rainforest Trees?

Catching the Right Wave: Evaluating Wave Energy Resources and Potential Compatibility with Existing Marine and Coastal Uses

Status of the European Green Crab in Oregon and Washington Estuaries Final Report November 2006

Regulation of Motility of Myogenic Cells in Filling Limb Muscle Anlagen by Pitx2

Proteins Secreted via the Type II Secretion System: Smart Strategies of Vibrio cholerae to Maintain Fitness in Different Ecological Niches

Regional variation in stand structure and development in forests of Oregon, Washington, and inland Northern California

Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations

A first chronology for the North Greenland Eemian Ice Drilling (NEEM) ice core

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