Index Catalog // ScholarsArchive@OSU

Patterns of loggerhead turtle ontogenetic shifts revealed through isotopic analysis of annual skeletal growth increments

Creator:: Ramirez, Matthew D., Avens, Larisa, Seminoff, Jeffrey A., Goshe, Lisa R., and Heppell, Selina S.
Abstract:: Ontogenetic changes in resource use often delimit transitions between life stages. Ecological and individual factors can cause variation in the timing and consistency of these transitions, ultimately affecting community and population dynamics through changes in growth and survival. Therefore, it is important to document and understand behavioral and life history...
Resource Type:: Article
Full Text:: ., Avens, L., Seminoff, J. A., Goshe, L. R., & Heppell, S. S. (2015). Patterns of loggerhead turtle

Regional variation in stand structure and development in forests of Oregon, Washington, and inland Northern California

Creator:: Reilly, Matthew J. and Spies, Thomas A.
Abstract:: Despite its importance to biodiversity and ecosystem function, patterns and drivers of regional scale variation in forest structure and development are poorly understood. We characterize structural variation, create a hierarchical classification of forest structure, and develop an empirically based framework for conceptualizing structural development from 11,091 plots across 25 million...
Resource Type:: Article
Full Text:: California MATTHEW J. REILLY1,� AND THOMAS A. SPIES2 1Department of Forest Ecosystems and Society, College

A genome scale metabolic network for rice and accompanying analysis of tryptophan, auxin and serotonin biosynthesis regulation under biotic stress

Creator:: Dharmawardhana, Palitha, Ren, Liya, Amarasinghe, Vindhya, Monaco, Marcela, Thomason, Jim, Ravenscroft, Dean, McCouch, Susan, Ware, Doreen, and Jaiswal, Pankaj
Abstract:: Background: Functional annotations of large plant genome projects mostly provide information on gene function and gene families based on the presence of protein domains and gene homology, but not necessarily in association with gene expression or metabolic and regulatory networks. These additional annotations are necessary to understand the physiology, development...
Resource Type:: Article
Full Text:: A genome scale metabolic network for rice and accompanying

Electronic Properties of Chlorine, Methyl, and Chloromethyl as Substituents to the Ethylene Group-Viewed from the Core of Carbon

Creator:: Zahl, Maria G., Fossheim, Randi, Børve, Knut J., Sæthre, Leif J., and Thomas, T. Darrah
Abstract:: “Substituent effects” is an important and useful concept in organic chemistry. Although there are many approaches to parametrizing the electronic and steric effects of substituents, the physical basis for the parameters is often unclear. The purpose of the present work is to explore the properties of chemical shifts in carbon...
Resource Type:: Article

Post-fire tree establishment and early cohort development in conifer forests of the western Cascades of Oregon, USA

Creator:: Tepley, Alan J., Swanson, Frederick J., and Spies, Thomas A.
Abstract:: Early‐seral ecosystems make important contributions to regional biodiversity by supporting high abundance and diversity of many plant and animal species that are otherwise rare or absent from closed‐canopy forests. Therefore, the period of post‐fire tree establishment is a key stage in forest stand and ecosystem development that can be viewed...
Resource Type:: Article
Full Text:: Oregon, USA ALAN J. TEPLEY,1,3,� FREDERICK J. SWANSON,2 AND THOMAS A. SPIES2 1Departments of

Evaluating Paratransgenesis as a Potential Control Strategy for African Trypanosomiasis

Creator:: Medlock, Jan, Atkins, Katherine E., Thomas, David N., Aksoy, Serap, and Galvani, Alison P.
Abstract:: Genetic-modification strategies are currently being developed to reduce the transmission of vector-borne diseases, including African trypanosomiasis. For tsetse, the vector of African trypanosomiasis, a paratransgenic strategy is being considered: this approach involves modification of the commensal symbiotic bacteria Sodalis to express trypanosome-resistance-conferring products. Modified Sodalis can then be driven into...
Resource Type:: Article
Full Text:: pntd.0002374 1..8 Evaluating Paratransgenesis as a Potential

Mutualistic Co-evolution of Type III Effector Genes in Sinorhizobium fredii and Bradyrhizobium japonicum

Creator:: Kimbrel, Jeffrey A., Thomas, William J., Jiang, Yuan, Creason, Allison L., Thireault, Caitlin A., Sachs, Joel L., and Chang, Jeff H.
Abstract:: Two diametric paradigms have been proposed to model the molecular co-evolution of microbial mutualists and their eukaryotic hosts. In one, mutualist and host exhibit an antagonistic arms race and each partner evolves rapidly to maximize their own fitness from the interaction at potential expense of the other. In the opposing...
Resource Type:: Article
Full Text:: Genes in Sinorhizobium fredii and Bradyrhizobium japonicum Jeffrey A. Kimbrel1,2.¤, William J. Thomas1,2

MTB-3, a Microtubule Plus-End Tracking Protein (+TIP) of Neurospora crassa

Creator:: Mourino-Perez, Rosa R., Linacre-Rojas, Lorena P., Roman-Gavilanes, Ariana I., Lew, Thomas K., Callejas-Negrete, Olga A., Roberson, Robert W., and Freitag, Michael
Abstract:: The microtubule (MT) "plus end" constitutes the platform for the accumulation of a structurally and functionally diverse group of proteins, collectively called "MT plus-end tracking proteins" (+TIPs). +TIPs control MT dynamics and link MTs to diverse sub-cellular structures. Neurospora crassa MicroTubule Binding protein-3 (MTB-3) is the homolog of yeast EB1,...
Resource Type:: Article
Full Text:: -Gavilanes1, Thomas K. Lew2, Olga A. Callejas-Negrete1, Robert W. Roberson3, Michael Freitag2 1 Departamento

A Phylogenetic Perspective on the Individual Species- Area Relationship in Temperate and Tropical Tree Communities

Creator:: Yang, Jie, Swenson, Nathan G., Cao, Min, Chuyong, George B., Ewango, Corneille E. N., Howe, Robert, Kenfack, David, Thomas, Duncan, Wolf, Amy, and Lin, Luxiang
Abstract:: Ecologists have historically used species-area relationships (SARs) as a tool to understand the spatial distribution of species. Recent work has extended SARs to focus on individual-level distributions to generate individual species area relationships (ISARs). The ISAR approach quantifies whether individuals of a species tend have more or less species richness...
Resource Type:: Article
Full Text:: deb_pone.0063192 1..10 A Phylogenetic Perspective on the

Local artifacts in ice core methane records caused by layered bubble trapping and in situ production: a multi-site investigation

Creator:: Rhodes, Rachael H., Faïn, Xavier, Brook, Edward J., McConnell, Joseph R., Maselli, Olivia J., Sigl, Michael, Edwards, Jon, Buizert, Christo, Blunier, Thomas, Chappellaz, Jérôme, and Freitag, Johannes
Abstract:: Advances in trace gas analysis allow localised, non-atmospheric features to be resolved in ice cores, superimposed on the coherent atmospheric signal. These high-frequency signals could not have survived the low-pass filter effect that gas diffusion in the firn exerts on the atmospheric history and therefore do not result from changes...
Resource Type:: Article

ScholarsArchive@OSU

Patterns of loggerhead turtle ontogenetic shifts revealed through isotopic analysis of annual skeletal growth increments

Regional variation in stand structure and development in forests of Oregon, Washington, and inland Northern California

A genome scale metabolic network for rice and accompanying analysis of tryptophan, auxin and serotonin biosynthesis regulation under biotic stress

Electronic Properties of Chlorine, Methyl, and Chloromethyl as Substituents to the Ethylene Group-Viewed from the Core of Carbon

Post-fire tree establishment and early cohort development in conifer forests of the western Cascades of Oregon, USA

Evaluating Paratransgenesis as a Potential Control Strategy for African Trypanosomiasis

Mutualistic Co-evolution of Type III Effector Genes in Sinorhizobium fredii and Bradyrhizobium japonicum

MTB-3, a Microtubule Plus-End Tracking Protein (+TIP) of Neurospora crassa

A Phylogenetic Perspective on the Individual Species- Area Relationship in Temperate and Tropical Tree Communities

Local artifacts in ice core methane records caused by layered bubble trapping and in situ production: a multi-site investigation

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