Index Catalog // ScholarsArchive@OSU

Evolutionary Biology for the 21st Century

Creator:: Losos, Jonathan B., Arnold, Stevan J., Bejerano, Gill, Brodie, E. D. III, Hibbett, David, Hoekstra, Hopi E., Mindell, David P., Monteiro, Antonia, Moritz, Craig, Orr, H. Allen, Petrov, Dmitri A., Renner, Susanne S., Ricklefs, Robert E., Soltis, Pamela S., and Turner, Thomas L.
Abstract:: We live in an exciting time for biology. Technological advances have made data collection easier and cheaper than we could ever have imagined just 10 years ago. We can now synthesize and analyze large data sets containing genomes, transcriptomes, proteomes, and multivariate phenotypes. At the same time, society's need for...
Resource Type:: Article
Full Text:: emerging research areas, and identify infrastructure and training needs. Evolutionary Applications

Nested scales of spatial heterogeneity in juvenile walleye pollock Theragra chalcogramma in the southeastern Bering Sea

Creator:: Benoit-Bird, Kelly J., McIntosh, Neal E., and Heppell, Scott A.
Abstract:: We sought to characterize the distribution of juvenile walleye pollock Theragra chalcogramma in an area of intense predator-prey interactions and to describe habitat features that lead to their observed distributions. The distribution of juvenile walleye pollock around the Pribilof Islands in the southeastern Bering Sea in 2008 and 2009 was...
Resource Type:: Article
Full Text:: Marine Ecology Progress Series 484:219 MARINE ECOLOGY

Escaped farmed salmon and trout in Chile: incidence, impacts, and the need for an ecosystem view

Creator:: Sepúlveda, Maritza, Arismendi, Ivan, Soto, Doris, Jara, Fernando, and Farias, Francisca
Abstract:: The exponential growth of the salmonid farming industry during the last 3 decades has created conditions for massive escapes of these exotic species into natural environments in southern Chile. Here, we review and update information about salmonid escapes from 1993 to 2012 and examine their potential environmental, social, and economic...
Resource Type:: Article
Full Text:: Inter-Research Accepted Manuscript http://cdss.library.oregonstate.edu/sa-termsofuse 1

Comparative Composition, Diversity and Trophic Ecology of Sediment Macrofauna at Vents, Seeps and Organic Falls

Creator:: Bernardino, Angelo F., Levin, Lisa A., Thurber, Andrew R., and Smith, Craig R.
Abstract:: Sediments associated with hydrothermal venting, methane seepage and large organic falls such as whale, wood and plant detritus create deep-sea networks of soft-sediment habitats fueled, at least in part, by the oxidation of reduced chemicals. Biological studies at deep-sea vents, seeps and organic falls have looked at macrofaunal taxa, but...
Resource Type:: Article
Full Text:: and Trophic Ecology of Sediment Macrofauna at Vents, Seeps and Organic Falls Angelo F. Bernardino1

Long-term individual sighting history database: an effective tool to monitor satellite tag effects on cetaceans

Creator:: Gendron, D., Serrano, I. Martinez, de la Cruz, A. Ugalde, Calambokidis, J., and Mate, B.
Abstract:: During the last 3 decades, tagging technology has been used to study different aspects of cetacean ecology. Tags implanted in animal’s blubber, muscle and surrounding tissue have produced successful results, providing information on long-term movements. However, apart from the reports of ‘divots’ (depressions) and swelling at the tag sites in...
Resource Type:: Article
Full Text:: n26:235 ENDANGERED SPECIES RESEARCH Endang Species Res Vol

Critically low abundance and limits to human-related mortality for the Maui's dolphin

Creator:: Hamner, Rebecca M., Wade, Paul, Oremus, Marc, Stanley, Martin, Brown, Phillip, Constantine, Rochelle, and Baker, C. Scott
Abstract:: The New Zealand endemic Maui’s dolphin Cephalorhynchus hectori maui is characterized by several life history traits thought to be important predictors of extinction risk in marine mammals, including a slow rate of reproduction, small geographic range, small group size, and coastal distribution. We continued the genetic monitoring of the remnant...
Resource Type:: Article
Full Text:: n26:87 ENDANGERED SPECIES RESEARCH Endang Species Res Vol

In Vivo Quantification Reveals Extensive Natural Variation in Mitochondrial Form and Function in Caenorhabditis briggsae

Creator:: Hicks, Kiley A., Howe, Dana K., Leung, Aubrey, Denver, Dee R., and Estes, Suzanne
Abstract:: In We have analyzed natural variation in mitochondrial form and function among a set of Caenorhabditis briggsae isolates known to harbor mitochondrial DNA structural variation in the form of a heteroplasmic nad5 gene deletion (nad5 Delta) that correlates negatively with organismal fitness. We performed in vivo quantification of 24 mitochondrial...
Resource Type:: Article
Full Text:: , Portland, Oregon, United States of America, 2 Department of Zoology and Center for Genome Research and

Mutualistic Co-evolution of Type III Effector Genes in Sinorhizobium fredii and Bradyrhizobium japonicum

Creator:: Kimbrel, Jeffrey A., Thomas, William J., Jiang, Yuan, Creason, Allison L., Thireault, Caitlin A., Sachs, Joel L., and Chang, Jeff H.
Abstract:: Two diametric paradigms have been proposed to model the molecular co-evolution of microbial mutualists and their eukaryotic hosts. In one, mutualist and host exhibit an antagonistic arms race and each partner evolves rapidly to maximize their own fitness from the interaction at potential expense of the other. In the opposing...
Resource Type:: Article
Full Text:: of America, 4 Center for Genome Research and Biocomputing, Oregon State University, Corvallis

The Genome of Tolypocladium inflatum: Evolution, Organization, and Expression of the Cyclosporin Biosynthetic Gene Cluster

Creator:: Bushley, Kathryn E., Raja, Rajani, Jaiswal, Pankaj, Cumbie, Jason S., Nonogaki, Mariko, Boyd, Alexander E., Owensby, C. Alisha, Knaus, Brian J., Elser, Justin, Miller, Daniel, Di, Yanming, McPhail, Kerry L., and Spatafora, Joseph W.
Abstract:: The ascomycete fungus Tolypocladium inflatum, a pathogen of beetle larvae, is best known as the producer of the immunosuppressant drug cyclosporin. The draft genome of T. inflatum strain NRRL 8044 (ATCC 34921), the isolate from which cyclosporin was first isolated, is presented along with comparative analyses of the biosynthesis of...
Resource Type:: Article
Full Text:: America, 3 Center for Genome Research & Biocomputing, Oregon State University, Corvallis, Oregon, United

Using data management plans as a research tool for improving data services in academic libraries

Creator:: Whitmire, Amanda L., Hswe, Patricia, Westra, Brian, Wells Parham, Susan, and Carlson, Jake
Abstract:: An analysis of Data Management Plans (DMPs) can offer insight into local data management practices. The IMLS- funded “Data management plans as A Research Tool (DART) Project” has developed an analytic rubric to assist librarians in facilitating and standardizing the review of DMPs. This panel will consist of data specialists...
Resource Type:: Presentation
Full Text:: Using data management plans as a research tool for

ScholarsArchive@OSU

Evolutionary Biology for the 21st Century

Nested scales of spatial heterogeneity in juvenile walleye pollock Theragra chalcogramma in the southeastern Bering Sea

Escaped farmed salmon and trout in Chile: incidence, impacts, and the need for an ecosystem view

Comparative Composition, Diversity and Trophic Ecology of Sediment Macrofauna at Vents, Seeps and Organic Falls

Long-term individual sighting history database: an effective tool to monitor satellite tag effects on cetaceans

Critically low abundance and limits to human-related mortality for the Maui's dolphin

In Vivo Quantification Reveals Extensive Natural Variation in Mitochondrial Form and Function in Caenorhabditis briggsae

Mutualistic Co-evolution of Type III Effector Genes in Sinorhizobium fredii and Bradyrhizobium japonicum

The Genome of Tolypocladium inflatum: Evolution, Organization, and Expression of the Cyclosporin Biosynthetic Gene Cluster

Using data management plans as a research tool for improving data services in academic libraries

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