Index Catalog // ScholarsArchive@OSU

Genetic and Functional Diversification of Small RNA Pathways in Plants

Creator:: Xie, Zhixin, Johansen, Lisa K., Gustafan, Adam M., Kasschau, Kristin D., Lellis, Andrew D., Zilberman, Daniel, Jacobsen, Steven E., and Carrington, James C.
Abstract:: Multicellular eukaryotes produce small RNA molecules (approximately 21–24 nucleotides) of two general types, microRNA (miRNA) and short interfering RNA (siRNA). They collectively function as sequence-specific guides to silence or regulate genes, transposons, and viruses and to modify chromatin and genome structure. Formation or activity of small RNAs requires factors belonging...
Resource Type:: Article
Full Text:: . Kasschau 1 , Andrew D. Lellis 1 , Daniel Zilberman 2 , Steven E. Jacobsen 2,3 , James C. Carrington 1

Amplification and dampening of soil respiration by changes in temperature variability

Creator:: Sierra, C. A., Harmon, M. E., Thomann, E., Perakis, S. S., and Loescher, H. W.
Abstract:: Accelerated release of carbon from soils is one of the most important feedbacks related to anthropogenically induced climate change. Studies addressing the mechanisms for soil carbon release through organic matter decomposition have focused on the effect of changes in the average temperature, with little attention to changes in temperature variability....
Resource Type:: Article
Full Text:: records from 1 June 1998 to 31 December 2006, with a grand mean of−2.5◦C. From the H. J. Andrews LTER

Mapping Migratory Bird Prevalence Using Remote Sensing Data Fusion

Creator:: Swatantran, Anu, Dubayah, Ralph, Goetz, Scott, Hofton, Michelle, Betts, Matthew G., Sun, Mindy, Simard, Marc, and Holmes, Richard
Abstract:: Background: Improved maps of species distributions are important for effective management of wildlife under increasing anthropogenic pressures. Recent advances in lidar and radar remote sensing have shown considerable potential for mapping forest structure and habitat characteristics across landscapes. However, their relative efficacies and integrated use in habitat mapping remain largely...
Resource Type:: Article
Full Text:: . PLoS ONE 7(1): e28922. doi:10.1371/journal.pone.0028922 Editor: Guy J-P. Schumann, University of

Predation on an Upper Trophic Marine Predator, the Steller Sea Lion: Evaluating High Juvenile Mortality in a Density Dependent Conceptual Framework

Creator:: Horning, Markus and Mellish, Jo-Ann E.
Abstract:: The endangered western stock of the Steller sea lion (Eumetopias jubatus) - the largest of the eared seals - has declined by 80% from population levels encountered four decades ago. Current overall trends from the Gulf of Alaska to the Aleutian Islands appear neutral with strong regional heterogeneities. A published...
Resource Type:: Article
Full Text:: differential impact of predation on multiple vital rates. Citation: Horning M, Mellish J-AE (2012) Predation

Delayed Cutaneous Wound Healing and Aberrant Expression of Hair Follicle Stem Cell Markers in Mice Selectively Lacking Ctip2 in Epidermis

Creator:: Liang, Xiaobo, Bhattacharya, Shreya, Bajaj, Gaurav, Guha, Gunjan, Wang, Zhixing, Jang, Hyo-Sang, Leid, Mark, Indra, Arup Kumar, and Ganguli-Indra, Gitali
Abstract:: Background: COUP-TF interacting protein 2 [(Ctip2), also known as Bcl11b] is an important regulator of skin homeostasis, and is overexpressed in head and neck cancer. Ctip2(ep-/-) mice, selectively ablated for Ctip2 in epidermal keratinocytes, exhibited impaired terminal differentiation and delayed epidermal permeability barrier (EPB) establishment during development, similar to what...
Resource Type:: Article
Full Text:: and Image J software, and epidermal thickness was quantified using Leica One-Suite software

Footprint of Positive Selection in Treponema pallidum subsp. pallidum Genome Sequences Suggests Adaptive Microevolution of the Syphilis Pathogen

Creator:: Giacani, Lorenzo, Chattopadhyay, Sujay, Centurion-Lara, Arturo, Jeffrey, BrendanM., Le, Hoavan T., Molini, Barbara J., Lukehart, Sheila A., Sokurenko, Evgeni V., and Rockey, Daniel D.
Abstract:: In the rabbit model of syphilis, infection phenotypes associated with the Nichols and Chicago strains of Treponema pallidum (T. pallidum), though similar, are not identical. Between these strains, significant differences are found in expression of, and antibody responses to some candidate virulence factors, suggesting the existence of functional genetic differences...
Resource Type:: Article
Full Text:: Giacani1*., Sujay Chattopadhyay2., Arturo Centurion-Lara1, Brendan M. Jeffrey3, Hoavan T. Le1, Barbara J

High-Density SNP Genotyping of Tomato (Solanum lycopersicum L.) Reveals Patterns of Genetic Variation Due to Breeding

Creator:: Sim, Sung-Chur, Van Deynze, Allen, Stoffel, Kevin, Douches, David S., Zarka, Daniel, Ganal, Martin W., Chetelat, Roger T., Hutton, Samuel F., Scott, John W., Gardner, Randolph G., Panthee, Dilip R., Mutschler, Martha, Myers, James R., and Francis, David M.
Abstract:: The effects of selection on genome variation were investigated and visualized in tomato using a high-density single nucleotide polymorphism (SNP) array. 7,720 SNPs were genotyped on a collection of 426 tomato accessions (410 inbreds and 16 hybrids) and over 97% of the markers were polymorphic in the entire collection. Principal...
Resource Type:: Article
Full Text:: Deynze2, Kevin Stoffel2, David S. Douches3, Daniel Zarka3, Martin W. Ganal4, Roger T. Chetelat5, Samuel F

The Aryl Hydrocarbon Receptor Mediates Leflunomide- Induced Growth Inhibition of Melanoma Cells

Creator:: O’Donnell, Edmond F., Kopparapu, Prasad Rao, Koch, Daniel C., Jang, Hyo Sang, Phillips, Jessica Lynne, Tanguay, Robert L., Kerkvliet, Nancy I., and Kolluri, Siva Kumar
Abstract:: A novel role of the dihydroorotatedehydrogenase (DHODH) inhibitor leflunomide as a potential anti-melanoma therapy was recently reported (Nature 471: 518-22, 2011). We previously reported that leflunomide strongly activates the transcriptional activity of the Aryl Hydrocarbon Receptor (AhR). We therefore tested whether the AhR regulates the anti-proliferative effects of leflunomide in...
Resource Type:: Article
Full Text:: , Daniel C. Koch1,2,5, Hyo Sang Jang1,2,5, Jessica Lynne Phillips1,3,5, Robert L. Tanguay2,3,4,5, Nancy I

Clostridium difficile Spore-Macrophage Interactions: Spore Survival

Creator:: Paredes-Sabja, Daniel, Cofre-Araneda, Glenda, Brito-Silva, Christian, Pizarro-Guajardo, Marjorie, and Sarker, Mahfuzur R.
Abstract:: Background: Clostridium difficile is the main cause of nosocomial infections including antibiotic associated diarrhea, pseudomembranous colitis and toxic megacolon. During the course of Clostridium difficile infections (CDI), C. difficile undergoes sporulation and releases spores to the colonic environment. The elevated relapse rates of CDI suggest that C. difficile spores has...
Resource Type:: Article
Full Text:: Interactions: Spore Survival Daniel Paredes-Sabja1,2*, Glenda Cofre-Araneda1, Christian Brito-Silva1, Marjorie

Comparison of fixatives and fixation time for PCR detection of Mycobacterium in zebrafish Danio rerio

Creator:: Peterson, Tracy S., Kent, Michael L., Ferguson, Jayde A., Watral, Virginia G., and Whipps, Christopher M.
Abstract:: Mycobacteriosis is a common disease of laboratory zebrafish Danio rerio. Different infection patterns occur in zebrafish depending on mycobacterial species. Mycobacterium marinum and M. haemophilum produce virulent infections associated with high mortality, whereas M. chelonae is more widespread and is not associated with high mortality. Identification of mycobacterial infections to...
Resource Type:: Article
Full Text:: polymerase chain reaction for rapid diagnosis of tubercu- losis. J Clin Microbiol 30: 255−258 Daniel TM

ScholarsArchive@OSU

Genetic and Functional Diversification of Small RNA Pathways in Plants

Amplification and dampening of soil respiration by changes in temperature variability

Mapping Migratory Bird Prevalence Using Remote Sensing Data Fusion

Predation on an Upper Trophic Marine Predator, the Steller Sea Lion: Evaluating High Juvenile Mortality in a Density Dependent Conceptual Framework

Delayed Cutaneous Wound Healing and Aberrant Expression of Hair Follicle Stem Cell Markers in Mice Selectively Lacking Ctip2 in Epidermis

Footprint of Positive Selection in Treponema pallidum subsp. pallidum Genome Sequences Suggests Adaptive Microevolution of the Syphilis Pathogen

High-Density SNP Genotyping of Tomato (Solanum lycopersicum L.) Reveals Patterns of Genetic Variation Due to Breeding

The Aryl Hydrocarbon Receptor Mediates Leflunomide- Induced Growth Inhibition of Melanoma Cells

Clostridium difficile Spore-Macrophage Interactions: Spore Survival

Comparison of fixatives and fixation time for PCR detection of Mycobacterium in zebrafish Danio rerio

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