Index Catalog // ScholarsArchive@OSU

Using assessment of NSF data management plans to enable evidence-based evolution of research data services

Creator:: Whitmire, Amanda L., Carlson, Jake, Hswe, Patricia, Wells Parham, Susan, Rolando, Lizzy, and Westra, Brian
Abstract:: Funding agencies increasingly require a data management plan (DMP) with funding proposals, which describe how data generated in the proposed work will be managed, preserved and shared. Data management plans are a rich source of information about an institution’s researchers and their research data management (RDM) knowledge, capabilities, and needs....
Resource Type:: Presentation
Full Text:: with a CC-BY 4.0 license. https://creativecommons.org/licenses/by/4.0/ This was presented at the

Enhancing the T-shaped learning profile when teaching hydrology using data, modeling, and visualization activities

Creator:: Sanchez, C. A., Ruddell, B. L., Schiesser, R., and Merwade, V.
Abstract:: Previous research has suggested that the use of more authentic learning activities can produce more robust and durable knowledge gains. This is consistent with calls within civil engineering education, specifically hydrology, that suggest that curricula should more often include professional perspective and data analysis skills to better develop the ‘T-shaped’...
Resource Type:: Article
Full Text:: Copernicus Publications on behalf of the European Geosciences Union Accepted Manuscript http

Absolute humidity and the seasonal onset of influenza in the continental United States

Creator:: Shaman, Jeffrey, Pitzer, Virginia E., Viboud, Cecile, Grenfell, Bryan T., and Lipsitch, Marc
Abstract:: Corrections 18 Mar 2010: Shaman J, Pitzer VE, Viboud C, Grenfell BT, Lipsitch M (2010) Correction: Absolute Humidity and the Seasonal Onset of Influenza in the Continental United States. PLOS Biology 8(3): 10.1371/annotation/35686514-b7a9-4f65-9663-7baefc0d63c0. 15 Mar 2010: Shaman J, Pitzer VE, Viboud C, Grenfell BT, Lipsitch M (2010) Correction: Absolute Humidity...
Resource Type:: Article
Full Text:: ): e1000316. doi:10.1371/journal.pbio.1000316 Academic Editor: Neil M. Ferguson, Imperial College London

The Level of Residual Dispersion Variation and the Power of Differential Expression Tests for RNA-Seq Data

Creator:: Mi, Gu and Di, Yanming
Abstract:: RNA-Sequencing (RNA-Seq) has been widely adopted for quantifying gene expression changes in comparative transcriptome analysis. For detecting differentially expressed genes, a variety of statistical methods based on the negative binomial (NB) distribution have been proposed. These methods differ in the ways they handle the NB nuisance parameters (i.e., the dispersion...
Resource Type:: Article
Full Text:: :10.1371/journal.pone.0120117 10.1371/journal.pone.0120117 Public Library of Science Version of Record

A Multi-Year Longitudinal Study of Water Quality Parameters in Four Salmon-Bearing and Recreational Streams on Mount Hood, Oregon

Creator:: Wasowski, Ronald, Alexander, David, Kolmes, Steven, Banet, Nathan, Card, Amy, Haines, Morgan, Kolmes, Elijah, Northcutt, Kelly, Roemer, Derek, and Webber, Sarah
Abstract:: Four streams-Clear Fork, Lost Creek, Camp Creek and Still Creek-in northwestern Oregon's Sandy River Basin were monitored for temperature, dissolved oxygen levels, and fecal bacterial concentrations in a multi-year analysis examining stream health for recreational users and anchor habitat for Pacific Salmon. Temperatures were recorded using micro -T temperature loggers...
Resource Type:: Article
Full Text:: ): e70453. doi:10.1371/journal.pone.0070453 Editor: Willem van Schaik, University Medical Center Utrecht

Intra‐ and inter‐annual variation in gray whale body condition on a foraging ground

Creator:: Soledade Lemos, Leila, Burnett, Jonathan D., Chandler, Todd E., Sumich, James L., and Torres, Leigh G.
Abstract:: Baleen whales store energy gained on foraging grounds to support reproduction and other metabolic needs while fasting for long periods during migration. Whale body condition can be used to monitor foraging success, and thus better understand and anticipate individual‐ and population‐level trends in reproduction and survival. We assessed the body...
Resource Type:: Article
Full Text:: data obtained from http://upwell.pfe g.noaa.gov/erddap/. ❖ www.esajournals.org 14 April 2020 ❖ Volume

Consortial-Based Customizations for New Primo UI

Creator:: Mealey, Nathan and Moore, Dan
Abstract:: Users interested in customizing their Primo installation are required to configure specific settings, files, and code during the View setup process. A consequence of this is that unique customizations are not easily sharable between institutions. With the release of the new Primo User Interface, Ex Libris has enabled institutions to...
Resource Type:: Article
Full Text:: for New Primo UI http://journal.code4lib.org/articles/11948 1/5 ISSN 19405758Issue 34, 20161025

Loss of Abdominal Muscle in Pitx2 Mutants Associated with Altered Axial Specification of Lateral Plate Mesoderm

Creator:: Eng, Diana, Ma, Hsiao-Yen, Xu, Jun, Shih, Hung-Ping, Gross, Michael K., and Kiouss, Chrissa
Abstract:: Correction 17 Oct 2012: Eng D, Ma HY, Xu J, Shih HP, Gross MK, et al. (2012) Correction: Loss of Abdominal Muscle in Pitx2 Mutants Associated with Altered Axial Specification of Lateral Plate Mesoderm. PLOS ONE 7(10): 10.1371/annotation/c980d5a1-1899-4d30-af7b-573d4049cf4b
Resource Type:: Article
Full Text:: Specification of Lateral Plate Mesoderm. PLoS ONE 7(7): e42228. doi:10.1371/journal.pone.0042228 Editor

Mechanistic Insights into Validoxylamine A 7’-Phosphate Synthesis by VldE Using the Structure of the Entire Product Complex

Creator:: Cavalier, Michael C., Yim, Young-Sun, Asamizu, Shumpei, Neau, David, Almabruk, Khaled H., Mahmud, Taifo, and Lee, Yong-Hwan
Abstract:: The pseudo-glycosyltransferase VldE catalyzes non-glycosidic C-N coupling between an unsaturated cyclitol and a saturated aminocyclitol with the conservation of the stereochemical configuration of the substrates to form validoxylamine A 7'-phosphate, the biosynthetic precursor of the antibiotic validamycin A. To study the molecular basis of its mechanism, the three-dimensional structures of...
Resource Type:: Article
Full Text:: unique b-hairpin motif. doi:10.1371/journal.pone.0044934.g003 Crystal Structure of the VldE Product

Near-Real-Time Acoustic Monitoring of Beaked Whales and Other Cetaceans Using a Seaglider (TM)

Creator:: Klinck, Holger, Mellinger, David K., Klinck, Karolin, Bogue, Neil M., Luby, James C., Jump, William A., Shilling, Geoffrey B., Litchendorf, Trina, Wood, Angela S., Schorr, Gregory S., and Baird, Robin W.
Abstract:: Correction 10 Aug 2012: Klinck H, Mellinger DK, Klinck K, Bogue NM, Luby JC, et al. (2012) Correction: Near-Real-Time Acoustic Monitoring of Beaked Whales and Other Cetaceans Using a Seaglider™. PLOS ONE 7(8): 10.1371/annotation/57ad0b82-87c4-472d-b90b-b9c6f84947f8.
Resource Type:: Article
Full Text:: Beaked Whales and Other Cetaceans Using a SeagliderTM. PLoS ONE 7(5): e36128. doi:10.1371/journal.pone

ScholarsArchive@OSU

Using assessment of NSF data management plans to enable evidence-based evolution of research data services

Enhancing the T-shaped learning profile when teaching hydrology using data, modeling, and visualization activities

Absolute humidity and the seasonal onset of influenza in the continental United States

The Level of Residual Dispersion Variation and the Power of Differential Expression Tests for RNA-Seq Data

A Multi-Year Longitudinal Study of Water Quality Parameters in Four Salmon-Bearing and Recreational Streams on Mount Hood, Oregon

Intra‐ and inter‐annual variation in gray whale body condition on a foraging ground

Consortial-Based Customizations for New Primo UI

Loss of Abdominal Muscle in Pitx2 Mutants Associated with Altered Axial Specification of Lateral Plate Mesoderm

Mechanistic Insights into Validoxylamine A 7’-Phosphate Synthesis by VldE Using the Structure of the Entire Product Complex

Near-Real-Time Acoustic Monitoring of Beaked Whales and Other Cetaceans Using a Seaglider (TM)

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