Index Catalog // ScholarsArchive@OSU

Dataset used for “The early life stages of California yellowtail (Seriola dorsalis) and white seabass (Atractoscion nobilis) respond to food particle taste more than smell.”

Creator:: Hawkyard, Matt, Langdon, Chris, Stuart, Kevin, and Drawbridge, Mark
Abstract:: This dataset was produced as a result of experiments conducted with simple and alginate complex particles that were used to evaluate feeding in California yellowtail and white seabass post larvae. Retention data was collected from a series of retention trials whereby particles were suspended in seawater for various lengths of...
Resource Type:: Dataset

Capitalizing on Oregon’s Offshore Freshwater Bounty REnewable Food Energy Water on Land and Sea (REFEWLS)

Creator:: Blessing, Jacob M.
Abstract:: REFEWLS - REnewable Food Energy Water on Land and Sea Nexus This project will explore the connections between food, energy, and water uses along Oregon's mid coastal regions with a emphasis and focus on Newport. On average Newport uses approximately 2,000,000 gallons of water per day, but in the tourist...
Resource Type:: Poster
Full Text:: , H., Person, M., Ge, S. & Edmunds, W.M. (2013) Offshore fresh groundwater reserves as a global

Tracking North Pacific Humpback Whales To Unravel Their Basin-Wide Movements

Creator:: Palacios, Daniel M., Mate, Bruce R., Baker, C. Scott, Hayslip, Craig E., Follett, Thomas M., Steel, Debbie, Lagerquist, Barbara A., Irvine, Ladd M., and Winsor, Martha H.
Abstract:: In 2014, Oregon State University (OSU) initiated a multi-year project to study humpback whale (Megaptera novaeangliae) migrations in the North Pacific Ocean using satellite tracking technology in combination with genetic and photo-identification (photo-ID) analyses. The study is highly relevant to management, given the need for new information arising from the...
Resource Type:: Technical Report
Full Text:: , Debbie Steel, Barbara A. Lagerquist, Ladd M. Irvine, and Martha H. Winsor Marine Mammal Institute

Big fishery, big data, and little crabs : using genomic methods to examine the seasonal recruitment patterns of early life stage dungeness crab (Cancer magister) in the California Current ecosystem

Creator:: Lee, Elizabeth M. J. and O'Malley, Kathleen
Abstract:: The California Current Ecosystem (CCE) is a dynamic marine ecosystem from which many socioeconomically important fisheries species are harvested. Here, a genotyping-by-sequencing (GBS) approach was used to examine genomic variation in an early life stage (megalopae) of the Dungeness crab (Cancer magister), which constitutes the most valuable single-species commercial fishery...
Resource Type:: Article
Full Text:: Lee and O’Malley Genomics and Dungeness Crab Recruitment REFERENCES Addison, J. A., and Hart, M. W

Fine-scale spatial and temporal genomic variation among Dungeness crab Cancer magister larval recruits in the California Current Ecosystem

Creator:: Lee, Elizabeth M. J. and O'Malley, Kathleen G.
Abstract:: Dynamic marine environments can shape complex spatial and temporal patterns in the population connectivity of marine species, and this is often exemplified in species with long larval phases. Here, we used a genotyping-by-sequencing (GBS) approach to examine fine-scale spatial and temporal genomic variation among Dungeness crab Cancer magister larval recruits...
Resource Type:: Article
Full Text:: ). Population connectivity within a species can be defined by the movement of indivi - duals among groups or

A latitudinal cline in the Chinook salmon (Oncorhynchus tshawytscha) Clock gene: evidence for selection on PolyQ length variants

Creator:: O'Malley, Kathleen G. and Banks, Michael A.
Abstract:: A critical seasonal event for anadromous Chinook salmon (Oncorhynchus tshawytscha) is the time at which adults migrate from the ocean to breed in freshwater. We investigated whether allelic variation at the circadian rhythm genes, OtsClock1a and OtsClock1b, underlies genetic control of migration timing among 42 populations in North America. We...
Resource Type:: Article
Full Text:: & M. A. Banks Clinal variation in OtsClock1b seasonal runs: autumn, spring and the only remaining

Characterizing neutral and adaptive genomic differentiation in a changing climate: The most northerly freshwater fish as a model

Creator:: O'Malley, Kathleen G., Vaux, Felix, and Black, Andrew N.
Abstract:: Arctic freshwater ecosystems have been profoundly affected by climate change. Given that the Arctic charr (Salvelinus alpinus) is often the only fish species inhabiting these ecosystems, it represents a valuable model for studying the impacts of climate change on species life‐history diversity and adaptability. Using a genotyping‐by‐se‐ quencing approach, we...
Resource Type:: Article
Full Text:: depth of 37 m, occurring ~10 m above sea level (Bøyum & Kjensmo, 1978). There is a brief ice‐free

Classification of Animal Movement Behavior through Residence in Space and Time

Creator:: Orben, Rachael A., Thompson, David R., Tolkova, Irina, and Torres, Leigh G.
Abstract:: Identification and classification of behavior states in animal movement data can be complex, temporally biased, time-intensive, scale-dependent, and unstandardized across studies and taxa. Large movement datasets are increasingly common and there is a need for efficient methods of data exploration that adjust to the individual variability of each track. We...
Resource Type:: Article
Full Text:: in Space and Time Leigh G. Torres1*, Rachael A. Orben1, Irina Tolkova2, David R. Thompson3 1

A Low-Volume Flow-Through System for Rearing Pacific Oyster (Crassostrea gigas) Larvae

Creator:: Fleener, Henry R.
Abstract:: Standard larval Pacific oyster (Crassostrea gigas) rearing systems can be described as either static or continuous flow. While rearing oyster larvae in static cultures can be a low-cost and simple method, static systems require significant husbandry effort, floorspace and can produce highly variable results due to environmental variance among cultures....
Resource Type:: Masters Thesis
Full Text:: for the degree of Master of Science in Fisheries Science presented on October 16, 2023. Title: A

Sex matters: Otolith shape and genomic variation in deacon rockfish (Sebastes diaconus)

Creator:: Vaux, Felix, Rasmuson, Leif K., Kautzi, Lisa A., Rankin, Polly S., Blume, Matthew T. O., Lawrence, Kelly A., Bohn, Sandra, and O'Malley, Kathleen G.
Abstract:: Little is known about intraspecific variation within the deacon rockfish (Sebastes di‐ aconus), a recently described species found in the northeast Pacific Ocean. We in‐ vestigated population structure among fish sampled from two nearshore reefs (Siletz Reef and Seal Rock) and one offshore site (Stonewall Bank) within a <50‐km2 area...
Resource Type:: Article
Full Text:: , fishing at depths ≥55 m opened to a new rec‐ reational fixed gear fishery that utilized modified

ScholarsArchive@OSU

Dataset used for “The early life stages of California yellowtail (Seriola dorsalis) and white seabass (Atractoscion nobilis) respond to food particle taste more than smell.”

Capitalizing on Oregon’s Offshore Freshwater Bounty REnewable Food Energy Water on Land and Sea (REFEWLS)

Tracking North Pacific Humpback Whales To Unravel Their Basin-Wide Movements

Big fishery, big data, and little crabs : using genomic methods to examine the seasonal recruitment patterns of early life stage dungeness crab (Cancer magister) in the California Current ecosystem

Fine-scale spatial and temporal genomic variation among Dungeness crab Cancer magister larval recruits in the California Current Ecosystem

A latitudinal cline in the Chinook salmon (Oncorhynchus tshawytscha) Clock gene: evidence for selection on PolyQ length variants

Characterizing neutral and adaptive genomic differentiation in a changing climate: The most northerly freshwater fish as a model

Classification of Animal Movement Behavior through Residence in Space and Time

A Low-Volume Flow-Through System for Rearing Pacific Oyster (Crassostrea gigas) Larvae

Sex matters: Otolith shape and genomic variation in deacon rockfish (Sebastes diaconus)

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