Index Catalog // ScholarsArchive@OSU

The conservation genetics juggling act: integrating genetics and ecology, science and policy

Creator:: Haig, Susan M., Miller, Mark. P., Bellinger, Renee, Draheim, Hope M., Mercer, Dacey M., and Mullins, Thomas D.
Abstract:: The field of conservation genetics, when properly implemented, is a constant juggling act integrating molecular genetics, ecology, and demography with applied aspects concerning managing declining species or implementing conservation laws and policies. This young field has grown substantially since the 1980s following the development of polymerase chain reaction and now...
Resource Type:: Article
Full Text:: The conservation genetics juggling act: integrating genetics and

Endogenous Small RNA Mediates Meiotic Silencing of a Novel DNA Transposon

Creator:: Wang, Yizhou, Smith, Kristina M., Taylor, John W., Freitag, Michael, and Stajich, Jason E.
Abstract:: Genome defense likely evolved to curtail the spread of transposable elements and invading viruses. A combination of effective defense mechanisms has been shown to limit colonization of the Neurospora crassa genome by transposable elements. A novel DNA transposon named Sly1-1 was discovered in the genome of the most widely used...
Resource Type:: Article
Full Text:: meiotic silencing of a novel DNA transposon. G3: Genes| Genomes| Genetics, 5(10), 1949-1960. doi:10.1534

The role of allochrony in influencing interspecific differences in foraging distribution during the non-breeding season between two congeneric crested penguin species

Creator:: Green, Cara-Paige, Ratcliffe, Norman, Mattern, Thomas, Thompson, David, Lea, Mary-Anne, Wotherspoon, Simon, Borboroglu, Pablo Garcia, Ellenberg, Ursula, Morrison, Kyle W., Pütz, Klemens, Sagar, Paul M., Seddon, Philip J., Torres, Leigh G., and Hindell, Mark A.
Abstract:: Mechanisms promoting coexistence between closely related species are fundamental for maintaining species diversity. Mechanisms of niche differentiation include allochrony which offsets the peak timing of resource utilisation between species. Many studies focus on spatial and temporal niche partitioning during the breeding season, few have investigated the role allochrony plays in...
Resource Type:: Article
Full Text:: under permit issued by the New Zealand Department of Conservation (Wildlife Act Authority 35682-FAU

A Low-Volume Flow-Through System for Rearing Pacific Oyster (Crassostrea gigas) Larvae

Creator:: Fleener, Henry R.
Abstract:: Standard larval Pacific oyster (Crassostrea gigas) rearing systems can be described as either static or continuous flow. While rearing oyster larvae in static cultures can be a low-cost and simple method, static systems require significant husbandry effort, floorspace and can produce highly variable results due to environmental variance among cultures....
Resource Type:: Masters Thesis
Full Text:: Fisheries, Wildlife, and Conservation Sciences Dean of the Graduate School I

Temporal Genetic Variance and Propagule-Driven Genetic Structure Characterize Naturalized Rainbow Trout (Oncorhynchus mykiss) from a Patagonian Lake Impacted by Trout Farming

Creator:: Benavente, Javiera N., Seeb, Lisa W., Seeb, James E., Arismendi, Ivan, Hernández, Cristián E., Gajardo, Gonzalo, Galleguillos, Ricardo, Cádiz, Maria I., Musleh, Selim S., and Gomez-Uchida, Daniel
Abstract:: Knowledge about the genetic underpinnings of invasions—a theme addressed by invasion genetics as a discipline—is still scarce amid well documented ecological impacts of non-native species on ecosystems of Patagonia in South America. One of the most invasive species in Patagonia’s freshwater systems and elsewhere is rainbow trout (Oncorhynchus mykiss). This...
Resource Type:: Article
Full Text:: about the genetic underpinnings of invasions—a theme addressed by invasion genetics as a discipline—is

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture

Creator:: Harper, Lisa, Campbell, Jacqueline, Cannon, Steve, Carson, James, Condon, Bradford, Cooper, Laurel, Dunn, Nathan, Elsik, Christine G., Farmer, Andrew, Ficklin, Stephen P., Grant, David, Grau, Emily, Cannon, Ethalinda K. S., Herndon, Nic, Hu, Zhi-Liang, Humann, Jodi, Jaiswal, Pankaj, Jonquet, Clement, Laporte, Marie-Angelique, Larmande, Pierre, Lazo, Gerard, McCarthy, Fiona, Menda, Naama, Jung, Sook, Mungall, Christopher J., Munoz-Torres, Monica C., Naithani, Sushma, Nelson, Rex, Nesdill, Daureen, Park, Carissa, Reecy, James, Reiser, Leonore, Sanderson, Lacey-Anne, Sen, Taner Z., Poelchau, Monica, Staton, Margaret, Subramaniam, Sabarinath, Tello-Ruiz, Marcela Karey, Unda, Victor, Unni, Deepak, Wang, Liya, Ware, Doreen, Wegrzyn, Jill, Williams, Jason, Woodhouse, Margaret, Walls, Ramona, Yu, Jing, Main, Doreen, Andorf, Carson, Arnaud, Elizabeth, Berardini, Tanya Z., and Birkett, Clayton
Abstract:: The future of agricultural research depends on data. The sheer volume of agricultural biological data being produced today makes excellent data management essential. Governmental agencies, publishers and science funders require datamanagement plans for publicly funded research. Furthermore, the value of data increases exponentially when they are properly stored, described, integrated...
Resource Type:: Article
Full Text:: article AgBioData consortium recommendations for sustainable genomics and genetics databases for

Larval development in the Pacific oyster and the impacts of ocean acidification : differential genetic effects in wild and domesticated stocks

Creator:: Durland, Evan, Pierre De Wit,, Meyer, Eli, and Langdon, Chris
Abstract:: The adaptive capacity of marine calcifiers to ocean acidification (OA) is a topic of great interest to evolutionary biologists and ecologists. Previous studies have provided evidence to suggest that larval resilience to high pCO2 seawater for these species is a trait with a genetic basis and variability in natural populations....
Resource Type:: Article
Full Text:: impacts of ocean acidification: Differential genetic effects in wild and domesticated stocks 2258

Population Structure and Phylogeography in Nassau Grouper (Epinephelus striatus), a Mass-Aggregating Marine Fish

Creator:: Jackson, Alexis M., Semmens, Brice X., de Mitcheson, Yvonne Sadovy, Nemeth, Richard S., Heppell, Scott A., Bush, Phillippe G., Aguilar-Perera, Alfonso, Claydon, John A. B., Calosso, Marta C., Sealey, Kathleen S., Schärer, Michelle T., and Bernardi, Giacomo
Abstract:: To address patterns of genetic connectivity in a mass-aggregating marine fish, we analyzed genetic variation in mitochondrial DNA (mtDNA), microsatellites, and single nucleotide polymorphisms (SNPs) for Nassau grouper (Epinephelus striatus). We expected Nassau grouper to exhibit genetic differentiation among its subpopulations due to its reproductive behavior and retentive oceanographic conditions...
Resource Type:: Article

Potentially adaptive mitochondrial haplotypes as a tool to identify divergent nuclear loci

Creator:: Garvin, Michael R., Templin, William D., Gharrett, Anthony J., DeCovich, Nick, Kondzela, Christine M., Guyon, Jeffrey R., and McPhee, Megan V.
Abstract:: 1. Genetic tools are commonly used for conservation and management of at-risk species. Individuals are often sampled from mixtures that are composed of many populations, which creates a need to assign individuals to their source. This can be problematic when the genetic divergence among source populations is weak but can...
Resource Type:: Article
Full Text:: . Key-words: conservation genetics, genetic stock identification, mitochondrial DNA, positive selection

Fine-scale spatial and temporal genomic variation among Dungeness crab Cancer magister larval recruits in the California Current Ecosystem

Creator:: Lee, Elizabeth M. J. and O'Malley, Kathleen G.
Abstract:: Dynamic marine environments can shape complex spatial and temporal patterns in the population connectivity of marine species, and this is often exemplified in species with long larval phases. Here, we used a genotyping-by-sequencing (GBS) approach to examine fine-scale spatial and temporal genomic variation among Dungeness crab Cancer magister larval recruits...
Resource Type:: Article
Full Text:: locations (demographic con- nectivity) and by gene flow between groups of indi- viduals (genetic

ScholarsArchive@OSU

The conservation genetics juggling act: integrating genetics and ecology, science and policy

Endogenous Small RNA Mediates Meiotic Silencing of a Novel DNA Transposon

The role of allochrony in influencing interspecific differences in foraging distribution during the non-breeding season between two congeneric crested penguin species

A Low-Volume Flow-Through System for Rearing Pacific Oyster (Crassostrea gigas) Larvae

Temporal Genetic Variance and Propagule-Driven Genetic Structure Characterize Naturalized Rainbow Trout (Oncorhynchus mykiss) from a Patagonian Lake Impacted by Trout Farming

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture

Larval development in the Pacific oyster and the impacts of ocean acidification : differential genetic effects in wild and domesticated stocks

Population Structure and Phylogeography in Nassau Grouper (Epinephelus striatus), a Mass-Aggregating Marine Fish

Potentially adaptive mitochondrial haplotypes as a tool to identify divergent nuclear loci

Fine-scale spatial and temporal genomic variation among Dungeness crab Cancer magister larval recruits in the California Current Ecosystem

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