Index Catalog // ScholarsArchive@OSU

Post-Breeding Season Migrations of a Top Predator, the Harbor Seal (Phoca vitulina richardii), from a Marine Protected Area in Alaska

Creator:: Womble, Jamie N. and Gende, Scott M.
Abstract:: Marine protected areas (MPAs) are increasingly being used as a conservation tool for highly mobile marine vertebrates and the focus is typically on protecting breeding areas where individuals are aggregated seasonally. Yet movements during the non-breeding season can overlap with threats that may be equally as important to population dynamics....
Resource Type:: Article
Full Text:: ; Accepted December 23, 2012; Published February 14, 2013 This is an open-access article, free of all

Climate Change Winners: Receding Ice Fields Facilitate Colony Expansion and Altered Dynamics in an Adélie Penguin Metapopulation

Creator:: LaRue, Michelle A., Ainley, David G., Swanson, Matt, Dugger, Katie M., Lyver, Phil O'B., Barton, Kerry, and Ballard, Grant
Abstract:: There will be winners and losers as climate change alters the habitats of polar organisms. For an Adelie penguin (Pygoscelis adeliae) colony on Beaufort Island (Beaufort), part of a cluster of colonies in the southern Ross Sea, we report a recent population increase in response to increased nesting habitat as...
Resource Type:: Article
Full Text:: southern annular mode variability. J Geo Res 113. doi: 10.1029/2007JC004269. 14. Massom RA, Stammerjohn

Deciphering the Cryptic Genome: Genome-wide Analyses of the Rice Pathogen Fusarium fujikuroi Reveal Complex Regulation of Secondary Metabolism and Novel Metabolites

Creator:: Wiemann, Philipp, Sieber, Christian M. K., von Bargen, Katharina W., Studt, Lena, Niehaus, Eva- Maria, Espino, Jose J., Huß, Kathleen, Michielse, Caroline B., Albermann, Sabine, Wagner, Dominik, Bergner, Sonja V., Connolly, Lanelle R., Fischer, Andreas, Reuter, Gunter, Kleigrewe, Karin, Bald, Till, Wingfield, Brenda D., Ophir, Ron, Freeman, Stanley, Hippler, Michael, Smith, Kristina M., Brown, Daren W., Proctor, Robert H., Munsterkotter, Martin, Freitag, Michael, Humpf, Hans-Ulrich, Guldener, Ulrich, and Tudzynski, Bettina
Abstract:: The fungus Fusarium fujikuroi causes "bakanae" disease of rice due to its ability to produce gibberellins (GAs), but it is also known for producing harmful mycotoxins. However, the genetic capacity for the whole arsenal of natural compounds and their role in the fungus' interaction with rice remained unknown. Here, we...
Resource Type:: Article
Full Text:: ) transacylase (MAT) domains. Based on domain content, 14 of the predicted PKSs are reducing-type PKSs (R-PKS

Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi

Creator:: Ohm, Robin A., Feau, Nicolas, Henrissat, Bernard, Schoch, Conrad L., Horwitz, Benjamin A., Barry, Kerrie W., Condon, Bradford J., Copeland, Alex C., Dhillon, Braham, Glaser, Fabian, Hesse, Cedar N., Kosti, Idit, LaButti, Kurt, Lindquist, Erika A., Lucas, Susan, Salamov, Asaf A., Bradshaw, Rosie E., Ciuffetti, Lynda, Hamelin, Richard C., Kema, Gert H. J., Lawrence, Christopher, Scott, James A., Spatafora, Joseph W., Turgeon, B. Gillian, de Wit, Pierre J. G. M., Zhong, Shaobin, Goodwin, Stephen B., and Grigoriev, Igor V.
Abstract:: Correction 5 Mar 2013: Ohm RA, Feau N, Henrissat B, Schoch CL, Horwitz BA, et al. (2013) Correction: Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi. PLOS Pathogens 9(3): 10.1371/annotation/fcca88ac-d684-46e0-a483-62af67e777bd
Resource Type:: Article
Full Text:: of Public Health, University of Toronto, Toronto, Canada, 14 Laboratory of Phytopathology

Host Identity Matters in the Amphibian-Batrachochytrium dendrobatidis System: Fine-Scale Patterns of Variation in Responses to a Multi-Host Pathogen

Creator:: Gervasi, Stephanie, Gondhalekar, Carmen, Olson, Deanna H., and Blaustein, Andrew R.
Abstract:: Species composition within ecological assemblages can drive disease dynamics including pathogen invasion, spread, and persistence. In multi-host pathogen systems, interspecific variation in responses to infection creates important context dependency when predicting the outcome of disease. Here, we examine the responses of three sympatric host species to a single fungal pathogen,...
Resource Type:: Article
Full Text:: MacVicar Animal Health Scholar Award (issued through Oregon State University to SG). The funders had no

First Leaf Emergence Force of Winter Wheat

Creator:: Lutcher, Larry K., Wuest, Stewart B., and Johlke, Tami R.
Abstract:: Small, single-point load cells were used to measure force exerted by the first leaf of three hard red cultivars (Farnum, Finley, and Norwest 553) as it emerged from a deep planting depth in a small containerized volume of soil. Coleoptile diameter was determined using a 0 to 25 mm, ratchet-stop...
Resource Type:: Dataset
Full Text:: seedlings. Soil Tillage Res. 17: 211-219. Carmer SG, Walker WM. 1985. Pairwise multiple comparisons of

ARK: Aggregation of Reads by K-Means for Estimation of Bacterial Community Composition

Creator:: Koslicki, David, Chatterjee, Saikat, Shahrivar, Damon, Walker, Alan W., Francis, Suzanna C., Fraser, Louise J., Vehkaperä, Mikko, Lan, Yueheng, and Corander, Jukka
Abstract:: Motivation: Estimation of bacterial community composition from high-throughput sequenced 16S rRNA gene amplicons is a key task in microbial ecology. Since the sequence data from each sample typically consist of a large number of reads and are adversely impacted by different levels of biological and technical noise, accurate analysis of...
Resource Type:: Article
Full Text:: [2], Quikr [3] and the recently proposed SEK [14]. Taxy is a convex-optimization based method. SEK

Local Variability Mediates Vulnerability of Trout Populations to Land Use and Climate Change

Creator:: Penaluna, Brooke E., Dunham, Jason B., Railsback, Steve F., Arismendi, Ivan, Johnson, Sherri L., Bilby, Robert E., Safeeq, Mohammad, and Skaugset, Arne E.
Abstract:: Land use and climate change occur simultaneously around the globe. Fully understanding their separate and combined effects requires a mechanistic understanding at the local scale where their effects are ultimately realized. Here we applied an individual-based model of fish population dynamics to evaluate the role of local stream variability in...
Resource Type:: Article
Full Text:: climate change intensify [14]. Accordingly, local variability in environmental conditions may play a key

The Effect of Iron Limitation on the Transcriptome and Proteome of Pseudomonas fluorescens Pf-5

Creator:: Lim, Chee Kent, Hassan, Karl A., Tetu, Sasha G., Loper, Joyce E., and Paulsen, Ian T.
Abstract:: One of the most important micronutrients for bacterial growth is iron, whose bioavailability in soil is limited. Consequently, rhizospheric bacteria such as Pseudomonas fluorescens employ a range of mechanisms to acquire or compete for iron. We investigated the transcriptomic and proteomic effects of iron limitation on P. fluorescens Pf-5 by...
Resource Type:: Article
Full Text:: transcriptional and post-transcriptional levels. Citation: Lim CK, Hassan KA, Tetu SG, Loper JE, Paulsen IT (2012

Cost of producing white pine lumber in New England

Creator:: Jensen, Victor S. (Victor Sylvan), 1901-, Behre, C. Edward (Charles Edward), 1895-, Benson, A. O. (Arnold Orlando), 1886-, and United States. Department of Agriculture
Resource Type:: Technical Report
Full Text:: 22 .7 25 .0 2 4 21 .5 66 .0 7 .0 14. 5 3. 7 11 .3 0 3. 7

Geo-Referenced, Abundance Calibrated Ocean Distribution of Chinook Salmon (Oncorhynchus tshawytscha) Stocks across the West Coast of North America

Creator:: Bellinger, M. Renee, Banks, Michael A., Bates, Sarah J., Crandall, Eric D., Garza, John Carlos, Sylvia, Gil, and Lawson, Peter W.
Abstract:: Understanding seasonal migration and localized persistence of populations is critical for effective species harvest and conservation management. Pacific salmon (genus Oncorhynchus) forecasting models predict stock composition, abundance, and distribution during annual assessments of proposed fisheries impacts. Most models, however, fail to account for the influence of biophysical factors on year-to-year...
Resource Type:: Article
Full Text:: -area combinations having zero catch for all sample days (n = 14 days total within nine of 168 week-area

ScholarsArchive@OSU

Post-Breeding Season Migrations of a Top Predator, the Harbor Seal (Phoca vitulina richardii), from a Marine Protected Area in Alaska

Climate Change Winners: Receding Ice Fields Facilitate Colony Expansion and Altered Dynamics in an Adélie Penguin Metapopulation

Deciphering the Cryptic Genome: Genome-wide Analyses of the Rice Pathogen Fusarium fujikuroi Reveal Complex Regulation of Secondary Metabolism and Novel Metabolites

Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi

Host Identity Matters in the Amphibian-Batrachochytrium dendrobatidis System: Fine-Scale Patterns of Variation in Responses to a Multi-Host Pathogen

First Leaf Emergence Force of Winter Wheat

ARK: Aggregation of Reads by K-Means for Estimation of Bacterial Community Composition

Local Variability Mediates Vulnerability of Trout Populations to Land Use and Climate Change

The Effect of Iron Limitation on the Transcriptome and Proteome of Pseudomonas fluorescens Pf-5

Cost of producing white pine lumber in New England

Geo-Referenced, Abundance Calibrated Ocean Distribution of Chinook Salmon (Oncorhynchus tshawytscha) Stocks across the West Coast of North America

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