Index Catalog // ScholarsArchive@OSU

GLiMR toolset (ArcGIS geoprocessing tools), instruction manual, and 3D data used in support of the manuscript "GLiMR: A GIS-Based Method for the Geometric Morphometric Analysis of Artifacts"

Creator:: Davis, Loren G., Bean, Daniel W., Nyers, Alexander J., and Brauner, David R.
Abstract:: Here, we describe and demonstrate a geographic information systems-based lithic morphometric research (GLiMR) software approach. GLiMR accurately and rapidly handles a sequence of ArcGIS procedures to extract geometric morphometric data from 2D and 3D scan files of lithic artifacts. GLiMR generates three main types of geometric properties: shape data, topographic...
Resource Type:: Dataset

Population History and Pathways of Spread of the Plant Pathogen Phytophthora plurivora

Creator:: Schoebel, Corine N., Stewart, Jane, Gruenwald, Niklaus J., Rigling, Daniel, and Prospero, Simone
Abstract:: Human activity has been shown to considerably affect the spread of dangerous pests and pathogens worldwide. Therefore, strict regulations of international trade exist for particularly harmful pathogenic organisms. Phytophthora plurivora, which is not subject to regulations, is a plant pathogen frequently found on a broad range of host species, both...
Resource Type:: Article

Resource Selection by the California Condor (Gymnogyps californianus) Relative to Terrestrial-Based Habitats and Meteorological Conditions

Creator:: Rivers, James W., Johnson, J. Matthew, Haig, Susan M., Schwarz, Carl J., Glendening, John W., Burnett, L. Joseph, George, Daniel, and Grantham, Jesse
Abstract:: Condors and vultures are distinct from most other terrestrial birds because they use extensive soaring flight for their daily movements. Therefore, assessing resource selection by these avian scavengers requires quantifying the availability of terrestrial-based habitats, as well as meteorological variables that influence atmospheric conditions necessary for soaring. In this study,...
Resource Type:: Article

A broad-spectrum cloning vector that exists as both an integrated element and a free plasmid in Chlamydia trachomatis

Creator:: Garvin, Lotisha, Vande Voorde, Rebecca, Dickinson, Mary, Carrell, Steven, Hybiske, Kevin, and Rockey, Daniel
Abstract:: Plasmid transformation of chlamydiae has created new opportunities to investigate host–microbe interactions during chlamydial infections; however, there are still limitations. Plasmid transformation requires a replicon derived from the native Chlamydia plasmid, and these transformations are species-specific. We explored the utility of a broad host-range plasmid, pBBR1MCS-4, to transform chlamydiae, with...
Resource Type:: Article
Full Text:: GarvinID 1, Rebecca Vande Voorde1, Mary Dickinson2, Steven Carrell1, Kevin Hybiske2, Daniel RockeyID 1* 1

Estimating Global ‘‘Blue Carbon’’ Emissions from Conversion and Degradation of Vegetated Coastal Ecosystems

Creator:: Pendleton, Linwood, Donato, Daniel C., Murray, Brian C., Crooks, Stephen, Jenkins, W. Aaron, Sifleet, Samantha, Craft, Christopher, Fourqurean, James W., Kauffman, J. Boone, Marba, Nuria, Megonigal, Patrick, Pidgeon, Emily, Herr, Dorothee, Gordon, David, and Baldera, Alexis
Abstract:: Recent attention has focused on the high rates of annual carbon sequestration in vegetated coastal ecosystems—marshes, mangroves, and seagrasses—that may be lost with habitat destruction (‘conversion’). Relatively unappreciated, however, is that conversion of these coastal ecosystems also impacts very large pools of previously-sequestered carbon. Residing mostly in sediments, this ‘blue...
Resource Type:: Article
Full Text:: from Conversion and Degradation of Vegetated Coastal Ecosystems Linwood Pendleton1., Daniel C. Donato2

Comparative Genomics of Plant-Associated Pseudomonas spp.: Insights into Diversity and Inheritance of Traits Involved in Multitrophic Interactions

Creator:: Loper, Joyce E., Hassan, Karl A., Mavrodi, Dmitri V., Davis, Edward W., II, Lim, Chee Kent, Shaffer, Brenda T., Elbourne, Liam D. H., Stockwell, Virginia O., Hartney, Sierra L., Breakwell, Katy, Henkels, Marcella D., Tetu, Sasha G., Rangel, Lorena I., Kidarsa, Teresa A., Wilson, Neil L., van de Mortel, Judith E., Song, Chunxu, Blumhagen, Rachel, Radune, Diana, Hostetler, Jessica B., Brinkac, Lauren M., Durkin, A. Scott, Kluepfel, Daniel A., Wechter, W. Patrick, Anderson, Anne J., Kim, Young Cheol, Pierson, Leland S., III, Pierson, Elizabeth A., Lindow, Steven E., Kobayashi, Donald Y., Raaijmakers, Jos M., Weller, David M., Thomashow, Linda S., Allen, Andrew E., and Paulsen, Ian T.
Abstract:: We provide here a comparative genome analysis of ten strains within the Pseudomonas fluorescens group including seven new genomic sequences. These strains exhibit a diverse spectrum of traits involved in biological control and other multitrophic interactions with plants, microbes, and insects. Multilocus sequence analysis placed the strains in three sub-clades,...
Resource Type:: Article
Full Text:: Durkin6, Daniel A. Kluepfel7, W. Patrick Wechter8, Anne J. Anderson9, Young Cheol Kim10, Leland S

Comparative Genomics of Plant-Associated Pseudomonas spp.: Insights into Diversity and Inheritance of Traits Involved in Multitrophic Interactions

Creator:: Loper, Joyce E., Hassan, Karl A., Mavrodi, Dmitri V., Davis, Edward W., II, Lim, Chee Kent, Shaffer, Brenda T., Elbourne, Liam D. H., Stockwell, Virginia O., Hartney, Sierra L., Breakwell, Katy, Henkels, Marcella D., Tetu, Sasha G., Rangel, Lorena I., Kidarsa, Teresa A., Wilson, Neil L., van de Mortel, Judith E., Song, Chunxu, Blumhagen, Rachel, Radune, Diana, Hostetler, Jessica B., Brinkac, Lauren M., Durkin, A. Scott, Kluepfel, Daniel A., Wechter, W. Patrick, Anderson, Anne J., Kim, Young Cheol, Pierson, Leland S., III, Pierson, Elizabeth A., Lindow, Steven E., Kobayashi, Donald Y., Raaijmakers, Jos M., Weller, David M., Thomashow, Linda S., Allen, Andrew E., and Paulsen, Ian T.
Abstract:: We provide here a comparative genome analysis of ten strains within the Pseudomonas fluorescens group including seven new genomic sequences. These strains exhibit a diverse spectrum of traits involved in biological control and other multitrophic interactions with plants, microbes, and insects. Multilocus sequence analysis placed the strains in three sub-clades,...
Resource Type:: Article
Full Text:: Durkin6, Daniel A. Kluepfel7, W. Patrick Wechter8, Anne J. Anderson9, Young Cheol Kim10, Leland S

The Fishery Performance Indicators: A Management Tool for Triple Bottom Line Outcomes

Creator:: Anderson, James L., Anderson, Christopher M., Chu, Jingjie, Meredith, Jennifer, Asche, Frank, Sylvia, Gil, Smith, Martin D., Anggraeini, Dessy, Arthur, Robert, Guttormsen, Atle, McCluney, Jessica K., Ward, Tim, Akpalu, Wisdom, Eggert, Håkan, Flores, Jimely, Freeman, Matthew A., Holland, Daniel S., Knapp, Gunnar, Kobayashi, Mimako, Larkin, Sherry, MacLauchlin, Karl, Shnier, Kurt, Soboli, Mark, Tveteras, Sigbjorn, Uchida, Hirotsugu, and Valderrama, Diego
Abstract:: Pursuit of the triple bottom line of economic, community and ecological sustainability has increased the complexity of fishery management; fisheries assessments require new types of data and analysis to guide science-based policy in addition to traditional biological information and modeling. We introduce the Fishery Performance Indicators (FPIs), a broadly applicable...
Resource Type:: Article
Full Text:: Line Outcomes Anderson, J. L., Anderson, C. M., Chu, J., Meredith, J., Asche, F., Sylvia, G

Host-Selective Toxins of Pyrenophora tritici-repentis Induce Common Responses Associated with Host Susceptibility

Creator:: Pandelova, Iovanna, Figueroa, Melania, Wilhelm, Larry J., Manning, Viola A., Mankaney, Aakash N., Mockler, Todd C., and Ciuffetti, Lynda M.
Abstract:: Pyrenophora tritici-repentis (Ptr), a necrotrophic fungus and the causal agent of tan spot of wheat, produces one or a combination of host-selective toxins (HSTs) necessary for disease development. The two most studied toxins produced by Ptr, Ptr ToxA (ToxA) and Ptr ToxB (ToxB), are proteins that cause necrotic or chlorotic...
Resource Type:: Article
Full Text:: Figueroa1,2, Larry J. Wilhelm1, Viola A. Manning1, Aakash N. Mankaney1, Todd C. Mockler1,3, Lynda M

Integrated Landscape Assessment Project final report

Creator:: Gaines, Lisa, Hemstrom, Miles, Kagan, Jimmy, and Salwasser, Janine
Abstract:: The Integrated Landscape Assessment Project (ILAP) was a multi-year effort to produce information, maps, and models to help land managers, policy-makers, and others conduct mid- to broad-scale (e.g., watersheds to states and larger areas) prioritization of land management actions, perform landscape assessments, and estimate cumulative effects of management actions for...
Resource Type:: Technical Report

ScholarsArchive@OSU

GLiMR toolset (ArcGIS geoprocessing tools), instruction manual, and 3D data used in support of the manuscript "GLiMR: A GIS-Based Method for the Geometric Morphometric Analysis of Artifacts"

Population History and Pathways of Spread of the Plant Pathogen Phytophthora plurivora

Resource Selection by the California Condor (Gymnogyps californianus) Relative to Terrestrial-Based Habitats and Meteorological Conditions

A broad-spectrum cloning vector that exists as both an integrated element and a free plasmid in Chlamydia trachomatis

Estimating Global ‘‘Blue Carbon’’ Emissions from Conversion and Degradation of Vegetated Coastal Ecosystems

Comparative Genomics of Plant-Associated Pseudomonas spp.: Insights into Diversity and Inheritance of Traits Involved in Multitrophic Interactions

Comparative Genomics of Plant-Associated Pseudomonas spp.: Insights into Diversity and Inheritance of Traits Involved in Multitrophic Interactions

The Fishery Performance Indicators: A Management Tool for Triple Bottom Line Outcomes

Host-Selective Toxins of Pyrenophora tritici-repentis Induce Common Responses Associated with Host Susceptibility

Integrated Landscape Assessment Project final report

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