Index Catalog // ScholarsArchive@OSU

Supplemental data to "A draft genome and transcriptome of common milkweed (Asclepias syriaca) as resources for evolutionary, ecological, and molecular studies in milkweeds and Apocynaceae"

Creator:: Weitemier, Kevin A.
Abstract:: This dataset contains a draft assembly of the common milkweed (Asclepias syriaca) nuclear genome, linkage group information, and gene family counts for Asclepias and related species. The genome assembly is accompanied by annotation of gene models, repeat models, transfer RNAs, and open reading frames, and mapping information of Asclepias transcripts,...
Resource Type:: Dataset

Submersible observations of deep-reef fishes of Heceta Bank, Oregon

Creator:: Pearcy, William G., Stein, David L., Hixon, Mark Anthony, Pikitch, Ellen K., Barss, William H., and Starr, Richard M.
Abstract:: Rockfishes, Sebastes spp.. were the most numerous and speciose fishes seen during 16 submersible dives from 64 to 305 m depth in the vicinity of Heceta Bank off the coast of Oregon. Dense schools of juvenile rockfishes and large yellowtail rockfish, S. flavidus, were observed only over rocky, high relief...
Resource Type:: Article
Full Text:: Bank, Oregon W. G. Pearcy, D. L. Stein, M. A. Hixon, E. K. Pikitch, W. H. Barss, and R. M. Starr

Comparison of submersible-survey and hydroacoustic-survey estimates of fish density on a rocky bank

Creator:: Starr, Richard M., Fox, David S., Hixon, Mark Anthony, Tissot, Brian N., Johnson, Gary E., and Barss, William H.
Abstract:: Submersible belt-transect surveys along a rocky bottom were combined with acoustic surveys of the water column to estimate depth distribution and density of fishes at Stonewall Bank, Oregon in the northeastern Pacific Ocean from September through October 1991. The objectives of the study were to determine the proportion of fish...
Resource Type:: Article
Full Text:: hydroacoustic-survey estimates of fish density on a roclRichard M. Starr* Sea Grant Extension

Relationship Between Climatic Factors and Distribution of Pratylenchus spp. in the Dryland Wheat-Production Areas of Eastern Washington

Creator:: Kandel, Shyam L., Smiley, Richard W., Garland-Campbell, Kimberly, Elling, Axel A., Abatzoglou, John T., Huggins, David, Rupp, Richard, and Paulitz, Timothy C.
Abstract:: Field surveys were conducted by collecting soil samples to estimate nematode densities in soil from winter wheat, spring wheat, spring barley, and spring legumes (lentil, chickpea, and pea) fields during 2010 and 2011. Pratylenchus spp. were observed in 60% of sampled fields. However, nematodes were detected in nearly all of...
Resource Type:: Article
Full Text:: Plant Pathology, Washington State University, Pullman 99164-6430; Richard W. Smiley, Columbia Basin

Effect of Climate on the Distribution of Fusarium spp. Causing Crown Rot of Wheat in the Pacific Northwest of the United States

Creator:: Poole, Grant J., Smiley, Richard W., Walker, Carl, Huggins, David, Rupp, Richard, Abatzoglou, John T., Garland-Campbell, Kimberly, and Paulitz, Timothy C.
Abstract:: Fusarium crown rot (FCR) is one of the most widespread root and crown diseases of wheat in the Pacific Northwest (PNW) of the United States. Our objectives were to characterize crown rot severity and distribution throughout the PNW by conducting a survey of 210 fields covering the diverse dryland wheat-producing...
Resource Type:: Article
Full Text:: United States Grant J. Poole, Richard W. Smiley, Carl Walker, David Huggins, Richard Rupp, John

Ambient PM₂.₅, O₃, and NO₂ Exposures and Associations with Mortality over 16 Years of Follow-Up in the Canadian Census Health and Environment Cohort (CanCHEC)

Creator:: Crouse, Dan L., Peters, Paul A., Hystad, Perry, Brook, Jeffrey R., van Donkelaar, Aaron, Martin, Randall V., Villeneuve, Paul J., Jerrett, Michael, Goldberg, Mark S., Pope, C. Arden, Brauer, Michael, Brook, Robert D., Menard, Richard, and Burnett, Richard T.
Abstract:: Background: Few studies examining the associations between long-term exposure to ambient air pollution and mortality have considered multiple pollutants when assessing changes in exposure due to residential mobility during follow-up. Objective: We investigated associations between cause-specific mortality and ambient concentrations of fine particulate matter (≤ 2.5 μm; PM₂.₅), ozone (O₃),...
Resource Type:: Article

Development of Molecular Markers for Determining Continental Origin of Wood from White Oaks (Quercus L. sect. Quercus)

Creator:: Schroeder, Hilke, Cronn, Richard, Yanbaev, Yulai, Jennings, Tara, Mader, Malte, Degen, Bernd, and Kersten, Birgit
Abstract:: To detect and avoid illegal logging of valuable tree species, identification methods for the origin of timber are necessary. We used next-generation sequencing to identify chloroplast genome regions that differentiate the origin of white oaks from the three continents; Asia, Europe, and North America. By using the chloroplast genome of...
Resource Type:: Article
Full Text:: Schroeder1*, Richard Cronn2, Yulai Yanbaev3, Tara Jennings4, Malte Mader1, Bernd Degen1, Birgit Kersten1 1

Preliminary Genomic Characterization of Ten Hardwood Tree Species from Multiplexed Low Coverage Whole Genome Sequencing

Creator:: Staton, Margaret, Best, Teodora, Khodwekar, Sudhir, Owusu, Sandra, Xu, Tao, Xu, Yi, Jennings, Tara, Cronn, Richard, Arumuganathan, A. Kathiravetpilla, Coggeshall, Mark, Gailing, Oliver, Liang, Haiying, Romero-Severson, Jeanne, Schlarbaum, Scott, and Carlson, John E.
Abstract:: Forest health issues are on the rise in the United States, resulting from introduction of alien pests and diseases, coupled with abiotic stresses related to climate change. Increasingly, forest scientists are finding genetic/genomic resources valuable in addressing forest health issues. For a set of ten ecologically and economically important native...
Resource Type:: Article
Full Text:: Characterization of Ten Hardwood Tree Species from Multiplexed Low Coverage Whole Genome Sequencing Staton, M

Reconciling estimates of the contemporary North American carbon balance among terrestrial biosphere models, atmospheric inversions, and a new approach for estimating net ecosystem exchange from inventory-based data

Creator:: Hayes, Daniel J., Turner, David P., Stinson, Graham, McGuire, A. David, Wei, Yaxing, West, Tristram O., Heath, Linda S., de Jong, Bernardus, McConkey, Brian G., Birdsey, Richard A., Kurz, Werner A., Jacobson, Andrew R., Huntzinger, Deborah N., Pan, Yude, Post, W. Mac, and Cook, Robert B.
Abstract:: We develop an approach for estimating net ecosystem exchange (NEE) using inventory-based information over North America (NA) for a recent 7-year period (ca. 2000–2006). The approach notably retains information on the spatial distribution of NEE, or the vertical exchange between land and atmosphere of all non-fossil fuel sources and sinks...
Resource Type:: Article

Integration of submersible transect data and high-resolution multibeam sonar imagery for a habitat-based groundfish assessment of Heceta Bank, Oregon

Creator:: Nasby-Lucas, Nicole M., Embley, Bob W., Hixon, Mark A., Merle, Susan G., Tissot, Brian N., and Wright, Dawn J.
Abstract:: In the face of dramatic declines in groundfish populations and a lack of sufficient stock assessment information, a need has arisen for new methods of assessing groundfish populations. We describe the integration of seafloor transect data gathered by a manned submersible with high-resolution sonar imagery to produce a habitat- based...
Resource Type:: Article
Full Text:: assessment of Heceta Bank, Oregon* Nicole M. Nasby-Lucas Pfl eger Institute of Environmental Research 901-B

ScholarsArchive@OSU

Supplemental data to "A draft genome and transcriptome of common milkweed (Asclepias syriaca) as resources for evolutionary, ecological, and molecular studies in milkweeds and Apocynaceae"

Submersible observations of deep-reef fishes of Heceta Bank, Oregon

Comparison of submersible-survey and hydroacoustic-survey estimates of fish density on a rocky bank

Relationship Between Climatic Factors and Distribution of Pratylenchus spp. in the Dryland Wheat-Production Areas of Eastern Washington

Effect of Climate on the Distribution of Fusarium spp. Causing Crown Rot of Wheat in the Pacific Northwest of the United States

Ambient PM₂.₅, O₃, and NO₂ Exposures and Associations with Mortality over 16 Years of Follow-Up in the Canadian Census Health and Environment Cohort (CanCHEC)

Development of Molecular Markers for Determining Continental Origin of Wood from White Oaks (Quercus L. sect. Quercus)

Preliminary Genomic Characterization of Ten Hardwood Tree Species from Multiplexed Low Coverage Whole Genome Sequencing

Reconciling estimates of the contemporary North American carbon balance among terrestrial biosphere models, atmospheric inversions, and a new approach for estimating net ecosystem exchange from inventory-based data

Integration of submersible transect data and high-resolution multibeam sonar imagery for a habitat-based groundfish assessment of Heceta Bank, Oregon

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