Index Catalog // ScholarsArchive@OSU

Development of Molecular Markers for Determining Continental Origin of Wood from White Oaks (Quercus L. sect. Quercus)

Creator:: Schroeder, Hilke, Cronn, Richard, Yanbaev, Yulai, Jennings, Tara, Mader, Malte, Degen, Bernd, and Kersten, Birgit
Abstract:: To detect and avoid illegal logging of valuable tree species, identification methods for the origin of timber are necessary. We used next-generation sequencing to identify chloroplast genome regions that differentiate the origin of white oaks from the three continents; Asia, Europe, and North America. By using the chloroplast genome of...
Resource Type:: Article
Full Text:: Origin of Wood from White Oaks (Quercus L. sect. Quercus) RESEARCH ARTICLE Development of Molecular

Supplemental data to "Estimating the Genetic Diversity of Pacific salmon and trout using Multi-gene eDNA Metabarcoding"

Creator:: Weitemier, Kevin A.
Abstract:: This dataset contains DNA sequence data of Oncorhynchus species, isolated from environmental DNA (eDNA) from Pacific Northwest streams via microfluidic eDNA metabarcoding and high-throughput (Ilummina) sequencing (samples collected from 2017-09-22 to 2017-10-10). It is accompanied by scripts and commands for data analyses including: sequence denoising, calculation of entropy values by...
Resource Type:: Dataset

Relationship Between Climatic Factors and Distribution of Pratylenchus spp. in the Dryland Wheat-Production Areas of Eastern Washington

Creator:: Kandel, Shyam L., Smiley, Richard W., Garland-Campbell, Kimberly, Elling, Axel A., Abatzoglou, John T., Huggins, David, Rupp, Richard, and Paulitz, Timothy C.
Abstract:: Field surveys were conducted by collecting soil samples to estimate nematode densities in soil from winter wheat, spring wheat, spring barley, and spring legumes (lentil, chickpea, and pea) fields during 2010 and 2011. Pratylenchus spp. were observed in 60% of sampled fields. However, nematodes were detected in nearly all of...
Resource Type:: Article
Full Text:: Kandel, S. L., Smiley, R. W., Garland-Campbell, K., Elling, A. A., Abatzoglou, J., Huggins, D., Rupp, R

Submersible observations of deep-reef fishes of Heceta Bank, Oregon

Creator:: Pearcy, William G., Stein, David L., Hixon, Mark Anthony, Pikitch, Ellen K., Barss, William H., and Starr, Richard M.
Abstract:: Rockfishes, Sebastes spp.. were the most numerous and speciose fishes seen during 16 submersible dives from 64 to 305 m depth in the vicinity of Heceta Bank off the coast of Oregon. Dense schools of juvenile rockfishes and large yellowtail rockfish, S. flavidus, were observed only over rocky, high relief...
Resource Type:: Article
Full Text:: Bank, Oregon W. G. Pearcy, D. L. Stein, M. A. Hixon, E. K. Pikitch, W. H. Barss, and R. M. Starr

Ambient PM₂.₅, O₃, and NO₂ Exposures and Associations with Mortality over 16 Years of Follow-Up in the Canadian Census Health and Environment Cohort (CanCHEC)

Creator:: Crouse, Dan L., Peters, Paul A., Hystad, Perry, Brook, Jeffrey R., van Donkelaar, Aaron, Martin, Randall V., Villeneuve, Paul J., Jerrett, Michael, Goldberg, Mark S., Pope, C. Arden, Brauer, Michael, Brook, Robert D., Menard, Richard, and Burnett, Richard T.
Abstract:: Background: Few studies examining the associations between long-term exposure to ambient air pollution and mortality have considered multiple pollutants when assessing changes in exposure due to residential mobility during follow-up. Objective: We investigated associations between cause-specific mortality and ambient concentrations of fine particulate matter (≤ 2.5 μm; PM₂.₅), ozone (O₃),...
Resource Type:: Article

Effect of Climate on the Distribution of Fusarium spp. Causing Crown Rot of Wheat in the Pacific Northwest of the United States

Creator:: Poole, Grant J., Smiley, Richard W., Walker, Carl, Huggins, David, Rupp, Richard, Abatzoglou, John T., Garland-Campbell, Kimberly, and Paulitz, Timothy C.
Abstract:: Fusarium crown rot (FCR) is one of the most widespread root and crown diseases of wheat in the Pacific Northwest (PNW) of the United States. Our objectives were to characterize crown rot severity and distribution throughout the PNW by conducting a survey of 210 fields covering the diverse dryland wheat-producing...
Resource Type:: Article
Full Text:: United States Grant J. Poole, Richard W. Smiley, Carl Walker, David Huggins, Richard Rupp, John

Comparison of submersible-survey and hydroacoustic-survey estimates of fish density on a rocky bank

Creator:: Starr, Richard M., Fox, David S., Hixon, Mark Anthony, Tissot, Brian N., Johnson, Gary E., and Barss, William H.
Abstract:: Submersible belt-transect surveys along a rocky bottom were combined with acoustic surveys of the water column to estimate depth distribution and density of fishes at Stonewall Bank, Oregon in the northeastern Pacific Ocean from September through October 1991. The objectives of the study were to determine the proportion of fish...
Resource Type:: Article
Full Text:: hydroacoustic-survey estimates of fish density on a roclRichard M. Starr* Sea Grant Extension

Interpretation and design of ocean acidification experiments in upwelling systems in the context of carbonate chemistry co-variation with temperature and oxygen

Creator:: Reum, Jonathan C. P., Alin, Simone R., Harvey, Chris J., Bednaršek, Nina, Evans, Wiley, Feely, Richard A., Hales, Burke, Lucey, Noelle, Mathis, Jeremy T., McElhany, Paul, Newton, Jan, and Sabine, Christopher L.
Abstract:: Coastal upwelling regimes are some of the most productive ecosystems in the ocean but are also among the most vulnerable to ocean acidification (OA) due to naturally high background concentrations of CO₂. Yet our ability to predict how these ecosystems will respond to additional CO₂ resulting from anthropogenic emissions is...
Resource Type:: Article

Preliminary Genomic Characterization of Ten Hardwood Tree Species from Multiplexed Low Coverage Whole Genome Sequencing

Creator:: Staton, Margaret, Best, Teodora, Khodwekar, Sudhir, Owusu, Sandra, Xu, Tao, Xu, Yi, Jennings, Tara, Cronn, Richard, Arumuganathan, A. Kathiravetpilla, Coggeshall, Mark, Gailing, Oliver, Liang, Haiying, Romero-Severson, Jeanne, Schlarbaum, Scott, and Carlson, John E.
Abstract:: Forest health issues are on the rise in the United States, resulting from introduction of alien pests and diseases, coupled with abiotic stresses related to climate change. Increasingly, forest scientists are finding genetic/genomic resources valuable in addressing forest health issues. For a set of ten ecologically and economically important native...
Resource Type:: Article
Full Text:: Jennings5, Richard Cronn5, A. Kathiravetpilla Arumuganathan6, Mark Coggeshall7, Oliver Gailing3, Haiying

Reconciling estimates of the contemporary North American carbon balance among terrestrial biosphere models, atmospheric inversions, and a new approach for estimating net ecosystem exchange from inventory-based data

Creator:: Hayes, Daniel J., Turner, David P., Stinson, Graham, McGuire, A. David, Wei, Yaxing, West, Tristram O., Heath, Linda S., de Jong, Bernardus, McConkey, Brian G., Birdsey, Richard A., Kurz, Werner A., Jacobson, Andrew R., Huntzinger, Deborah N., Pan, Yude, Post, W. Mac, and Cook, Robert B.
Abstract:: We develop an approach for estimating net ecosystem exchange (NEE) using inventory-based information over North America (NA) for a recent 7-year period (ca. 2000–2006). The approach notably retains information on the spatial distribution of NEE, or the vertical exchange between land and atmosphere of all non-fossil fuel sources and sinks...
Resource Type:: Article
Full Text:: † , GRAHAM ST INSON ‡ , A . DAV ID MCGU IRE § , YAX ING WE I * , TR I S TRAM O . WEST ¶ , L INDA S . HEATH

ScholarsArchive@OSU

Development of Molecular Markers for Determining Continental Origin of Wood from White Oaks (Quercus L. sect. Quercus)

Supplemental data to "Estimating the Genetic Diversity of Pacific salmon and trout using Multi-gene eDNA Metabarcoding"

Relationship Between Climatic Factors and Distribution of Pratylenchus spp. in the Dryland Wheat-Production Areas of Eastern Washington

Submersible observations of deep-reef fishes of Heceta Bank, Oregon

Ambient PM₂.₅, O₃, and NO₂ Exposures and Associations with Mortality over 16 Years of Follow-Up in the Canadian Census Health and Environment Cohort (CanCHEC)

Effect of Climate on the Distribution of Fusarium spp. Causing Crown Rot of Wheat in the Pacific Northwest of the United States

Comparison of submersible-survey and hydroacoustic-survey estimates of fish density on a rocky bank

Interpretation and design of ocean acidification experiments in upwelling systems in the context of carbonate chemistry co-variation with temperature and oxygen

Preliminary Genomic Characterization of Ten Hardwood Tree Species from Multiplexed Low Coverage Whole Genome Sequencing

Reconciling estimates of the contemporary North American carbon balance among terrestrial biosphere models, atmospheric inversions, and a new approach for estimating net ecosystem exchange from inventory-based data

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