Index Catalog // ScholarsArchive@OSU

The Development and Application of a Systems Biology Approach to Mapping Monocyte Gene Regulatory Networks.

Creator:: Choudhury, Mudra
Abstract:: While monocytes are vital for host defense against pathogens, in cases of non-resolving inflammation, monocytes and their differentiated progeny can secrete tissue-damaging factors, present auto-antigens, and promote the inflammatory response. In this study, a systems biology approach was used to map human monocyte gene regulatory regions by integrating expression quantitative...
Resource Type:: Honors College Thesis
Full Text:: . PLoS One 5:e10693. doi: 10.1371/journal.pone.0010693 6. Landt SG, Marinov GK, Kundaje A, et al

The Development and Application of a Systems Biology Approach to Mapping Monocyte Gene Regulatory Networks

Creator:: Choudhury, Mudra
Abstract:: While monocytes are vital for host defense against pathogens, in cases of non-resolving inflammation, monocytes and their differentiated progeny can secrete tissue-damaging factors, present auto-antigens, and promote the inflammatory response. In this study, a systems biology approach was used to map human monocyte gene regulatory regions by integrating expression quantitative...
Resource Type:: Honors College Thesis
Full Text:: . PLoS One 5:e10693. doi: 10.1371/journal.pone.0010693 6. Landt SG, Marinov GK, Kundaje A, et al

Genotyping Cytochrome P450 1B1*3(Phase I) and Glutathione S-transferase Mu 1 null (Phase II), Metabolizing Enzymes in a [14C]Benzo[a]pyrene Human Micro Dosing Study

Creator:: Luo, Yun L.
Abstract:: Polycyclic Aromatic Hydrocarbons (PAHs) have been studied for their carcinogenic toxicity. PAHs are formed by incomplete carbon combustion. Benzo[a]pyrene (BaP) is an IARC classified Class 1 Human carcinogenic PAH. New studies are conducted to gain a better understanding of PAHs and how to reduce exposure. Glutathione S-transferase M 1 (GSTM1...
Resource Type:: Honors College Thesis
Full Text:: ://doi.org/10.1371/journal.pone.0068634 Zhu, J., Fu, W., Jia, W., Xia, H., Liu, G., & He, J. (2018

Bacterial seed endophytes of Douglas-fir (Pseudotsuga menziesii) and their potential to confer drought tolerance

Creator:: Hatwal, Shikhar
Abstract:: Bacterial endophytes have the potential to confer benefits to Douglas-fir ( Pseudotsuga menziesii ), for instance drought tolerance. Bacterial endophytes originating from seeds are especially important. This is because seed endophytes are more likely to be the first endophytes to get established within the young host plant. The goals of...
Resource Type:: Undergraduate Thesis
Full Text:: , 7(4). doi:10.1371/journal.pone.0036090 10. Schmidt, C. S., Alavi, M., Cardinale, M., Müller, H

Enhancing Protocols to Improve Consistency Across Nanotoxicology Studies

Creator:: Luker, Sabrina R.
Abstract:: In current nanotoxicology research, there is a lack of standardization in reporting of zebrafish exposure media and sonication practices. This lack of standardization in use and reporting methods has made reproducing nanoparticle (NP) toxicity results between labs a common issue. It is important to have a standardized way of reporting...
Resource Type:: Undergraduate Thesis

Honey Bees (Apis mellifera) and Agricultural Chemicals: Global to Micro Perspectives

Creator:: Bernert, Ann
Abstract:: Fungicide sensitivity of honey bee associated fungi Abstract - Honey bees are exposed to a wide range of pesticides while pollinating agricultural crops. These pesticides residues are found in beeswax, nectar and pollen in the hive. Some of the pesticides found are fungicides which are not generally considered harmful to...
Resource Type:: Undergraduate Thesis
Full Text:: 1992–2009. PLoS One DOI: 10.1371/journal.pone.0037235 Cain, M., Bowman, W., Hacker, S.D. (2014

Biochar as a cover for dairy manure lagoons: reducing odor and gas emissions while capturing nutrients

Creator:: Dougherty, Brian W.
Abstract:: Liquid manure lagoons are known to be sources of odor and environmentally damaging gas emissions. Land application of the manure slurry after storage can lead to detrimental nutrient runoff and leaching. Floating lagoon covers (biocovers) are one option for reducing emissions, but to date they have only been used to...
Resource Type:: Undergraduate Thesis
Full Text:: Biochar Adsorption of Ammonium and Nitrate.” PloS One 9 (12): e113888. doi:10.1371/journal.pone.0113888

An Evaluation of Staffing Needs at the Health Clinic in Maunatlala, Botswana

Creator:: Bedge, Sonya S.
Abstract:: As part of the Botswana Global Learning Internship Program, a qualitative study was conducted regarding the current staffing conditions at the local village health clinic in Maunatlala, Botswana. This was a month-long project conducted over the summer of 2018. Students from Oregon State University lived in the village of Maunatlala...
Resource Type:: Honors College Thesis
Full Text:: workers. PLOS ONE, 13(11), e0206969. https://doi.org/10.1371/journal.pone.0206969 Overview [Text/HTML

Metagenomics Analysis Reveal Host-Microbe Interactions in Cervical Cancer

Creator:: Lam, Khiem C.
Abstract:: Cervical cancer is the fourth most common cancer in women worldwide. Recently it has been shown that microbiota play a role in some types of cancer. Therefore, to understand whether microbes contribute in any way to the development and progress of cervical cancer, we investigated the cervical microbiome via analysis...
Resource Type:: Presentation and Honors College Thesis

Effects of Selenium Supplementation During Different Trimesters of Pregnancy on Total and Vibrio coralliilyticus Specific IgM Antibody Concentrations in Beef Cows at Parturition

Creator:: Zurita Cruz, Cindy
Abstract:: Background: The immune response to microbial infections is compromised in beef cattle at parturition. Innate and adaptive immunoglobulin M (IgM) serve as initial antibodies during microbial infection before the generation of adaptive immunoglobulin G (IgG). Selenium (Se) is an essential micronutrient required by all mammals, which can improve immune responses...
Resource Type:: Undergraduate Thesis
Full Text:: populations. Plos One, 12(6), e0180415. doi:10.1371/journal.pone.0180415 Dussert, L., & Baulez M. (2011

ScholarsArchive@OSU

The Development and Application of a Systems Biology Approach to Mapping Monocyte Gene Regulatory Networks.

The Development and Application of a Systems Biology Approach to Mapping Monocyte Gene Regulatory Networks

Genotyping Cytochrome P450 1B1*3(Phase I) and Glutathione S-transferase Mu 1 null (Phase II), Metabolizing Enzymes in a [14C]Benzo[a]pyrene Human Micro Dosing Study

Bacterial seed endophytes of Douglas-fir (Pseudotsuga menziesii) and their potential to confer drought tolerance

Enhancing Protocols to Improve Consistency Across Nanotoxicology Studies

Honey Bees (Apis mellifera) and Agricultural Chemicals: Global to Micro Perspectives

Biochar as a cover for dairy manure lagoons: reducing odor and gas emissions while capturing nutrients

An Evaluation of Staffing Needs at the Health Clinic in Maunatlala, Botswana

Metagenomics Analysis Reveal Host-Microbe Interactions in Cervical Cancer

Effects of Selenium Supplementation During Different Trimesters of Pregnancy on Total and Vibrio coralliilyticus Specific IgM Antibody Concentrations in Beef Cows at Parturition

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