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Filtering by: Creator Filichkin, Sergei A. Remove constraint Creator: Filichkin, Sergei A. Non-Academic Affiliation Oregon State University. Center for Genome Research and Biocomputing Remove constraint Non-Academic Affiliation: Oregon State University. Center for Genome Research and Biocomputing

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  • Investigating Transcriptional Control of Specialized Gene Expression in Plants

    Creator:
    Fraser, Valerie N.
    Abstract:
    Specialized or secondary metabolism is a collection of pathways and small molecules that, while beneficial to an organism, are not strictly necessary for survival. Plants use secondary metabolites to, among other things, attract pollinators, defend against biotic and abiotic stressors, and form symbioses. Natural products from plants have seen an...
    Resource Type:
    Dissertation
    Full Text:
    your kind mentorship throughout our collaborations. To Dr. Sergei Filichkin and to the late Dr. Maria

  • Transcriptomic Analyses of Crop Plants using Next-Generation Sequencing Technology

    Creator:
    Geniza, Matthew J.
    Abstract:
    Advancements in molecular biology and computer science have enabled researchers the ability to investigate the transcriptome – the quantification of an organism’s RNA transcripts in response to its environment on a system wide scale. The collective chapters of this thesis utilize high-throughput RNA sequencing, which produces hundreds of millions of...
    Resource Type:
    Dissertation
    Full Text:
    response to its environment on a system wide scale. The collective chapters of this thesis utilize high

  • Comparative Transcriptomics in Stress-Induced Rice

    Creator:
    Al-Bader, Noor M.
    Abstract:
    Rice is an important crop that feeds almost half the world population. As climate change models predict floods, drought and extreme temperatures in rice production areas, the need to better understand the genetic basis of adaptation and tolerance to abiotic and biotic stresses is vital to sustain our food supply....
    Resource Type:
    Dissertation
    Full Text:
    our food supply. To elucidate stress-tolerance casual genes, we designed a time-series transcriptome